RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C10orf113Q5VZT2 155 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 VAMP8Q9BV40 100 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 PRO1933Q9H354 126 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 CACFD1Q9UGQ2 172 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 ADGRL2O95490 1459 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 CACNA1EQ15878 2313 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 CCNB3Q8WWL7 1395 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 NSD3Q9BZ95 1437 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 A0A0G2JND7 137 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 COL5A1-AS1Q5SY13 56 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 TP53AIP1Q9HCN2 124 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 ANKRD36BQ8N2N9 1353 aa0.57□□□□□ -2.32
SNRPF-202ENST00000549580 LAMC1P11047 1609 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 SCN7AQ01118 1682 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 ABCC10Q5T3U5 1492 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 MLH3Q9UHC1 1453 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 TRBV6-1A0A0K0K1D8 114 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 PMCHL1Q16048 86 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 FDCSPQ8NFU4 85 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 FAM208BQ5VWN6 2430 aa0.56□□□□□ -2.32
SNRPF-202ENST00000549580 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
SNRPF-202ENST00000549580 ARHGEF12Q9NZN5 1544 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 SPINK1P00995 79 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 Q8IZM0 81 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 SERP2Q8N6R1 65 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 TRGV9Q99603 122 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 COL4A6Q14031 1691 aa0.55□□□□□ -2.32
SNRPF-202ENST00000549580 POLA1P09884 1462 aaPredicted RBP0.54□□□□□ -2.32
SNRPF-202ENST00000549580 CACNA1CQ13936 2221 aa0.54□□□□□ -2.32
SNRPF-202ENST00000549580 TRBV25-1A0A075B6N4 114 aa0.54□□□□□ -2.32
SNRPF-202ENST00000549580 UQCRHP07919 91 aa0.54□□□□□ -2.32
SNRPF-202ENST00000549580 PIGYQ3MUY2 71 aa0.54□□□□□ -2.32
SNRPF-202ENST00000549580 LINC00846Q9NV44 126 aa0.54□□□□□ -2.32
SNRPF-202ENST00000549580 PDCD11Q14690 1871 aaKnown RBP0.54□□□□□ -2.32
SNRPF-202ENST00000549580 MAGI1Q96QZ7 1491 aaPredicted RBP0.54□□□□□ -2.32
SNRPF-202ENST00000549580 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.32
SNRPF-202ENST00000549580 TPRP12270 2363 aaKnown RBP0.53□□□□□ -2.32
SNRPF-202ENST00000549580 C7orf77A4D0Y5 90 aa0.53□□□□□ -2.32
SNRPF-202ENST00000549580 PSMG4Q5JS54 123 aa0.53□□□□□ -2.32
SNRPF-202ENST00000549580 SNHG12Q9BXW3 62 aa0.53□□□□□ -2.32
SNRPF-202ENST00000549580 ABCA12Q86UK0 2595 aa0.53□□□□□ -2.32
SNRPF-202ENST00000549580 NUP188Q5SRE5 1749 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 MYO7BQ6PIF6 2116 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 H7BZZ5 65 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 I3L2K1 104 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 FAUP35544 74 aaKnown RBP0.52□□□□□ -2.33
SNRPF-202ENST00000549580 LINC01600Q96MT4 127 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 AKAP12Q02952 1782 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 AHCTF1Q8WYP5 2266 aa0.52□□□□□ -2.33
SNRPF-202ENST00000549580 C1orf167Q5SNV9 1468 aa0.51□□□□□ -2.33
SNRPF-202ENST00000549580 PIEZO1Q92508 2521 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 ANKRD26Q9UPS8 1709 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 PAPPAQ13219 1627 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 A0A087WVE0 104 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 TRBV7-4A0A0J9YYF1 115 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 SYS1-DBNDD2H3BUS1 97 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 CFDP00746 253 aaPredicted RBP0.5□□□□□ -2.33
SNRPF-202ENST00000549580 ASIPP42127 132 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 POLQO75417 2590 aa0.5□□□□□ -2.33
SNRPF-202ENST00000549580 NHSL1Q5SYE7 1610 aa0.49□□□□□ -2.33
SNRPF-202ENST00000549580 UQCRHLA0A096LP55 91 aa0.49□□□□□ -2.33
SNRPF-202ENST00000549580 TRBV7-7A0A0K0K1E9 115 aa0.49□□□□□ -2.33
SNRPF-202ENST00000549580 LCN9Q8WX39 176 aa0.49□□□□□ -2.33
SNRPF-202ENST00000549580 F8P00451 2351 aa0.49□□□□□ -2.33
SNRPF-202ENST00000549580 RAPGEF2Q9Y4G8 1499 aa0.48□□□□□ -2.33
SNRPF-202ENST00000549580 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
SNRPF-202ENST00000549580 H3BQF6 201 aa0.48□□□□□ -2.33
SNRPF-202ENST00000549580 WFDC2Q14508 124 aa0.48□□□□□ -2.33
SNRPF-202ENST00000549580 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
SNRPF-202ENST00000549580 Q9H521 79 aa0.47□□□□□ -2.33
SNRPF-202ENST00000549580 ABCC2Q92887 1545 aa0.47□□□□□ -2.33
SNRPF-202ENST00000549580 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
SNRPF-202ENST00000549580 LINC00959A0A1B0GUT2 108 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 GYPAP02724 150 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 ARMS2P0C7Q2 107 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 ZNF720Q7Z2F6 126 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 TULP4Q9NRJ4 1543 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 XRN1Q8IZH2 1706 aaKnown RBP0.46□□□□□ -2.34
SNRPF-202ENST00000549580 MARF1Q9Y4F3 1742 aaKnown RBP0.46□□□□□ -2.34
SNRPF-202ENST00000549580 PLEKHH2Q8IVE3 1493 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 PLCE1Q9P212 2302 aa0.46□□□□□ -2.34
SNRPF-202ENST00000549580 Q5VSD8 79 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 DEFB123Q8N688 67 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 U3KQA8 63 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 NLRP1Q9C000 1473 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 CLTCQ00610 1675 aaKnown RBP0.45□□□□□ -2.34
SNRPF-202ENST00000549580 TROQ12816 1431 aaPredicted RBP0.45□□□□□ -2.34
SNRPF-202ENST00000549580 SPTBN2O15020 2390 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 SETBP1Q9Y6X0 1596 aa0.45□□□□□ -2.34
SNRPF-202ENST00000549580 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 HMGN3Q15651 99 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 ETDBQ3ZM63 59 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 DEFB107AQ8IZN7 70 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 KNDC1Q76NI1 1749 aa0.44□□□□□ -2.34
SNRPF-202ENST00000549580 CELSR2Q9HCU4 2923 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms