RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CELSR2Q9HCU4 2923 aa5.73□□□□□ -1.49
CSDE1-214ENST00000530886 PROK1P58294 105 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 LINC01560Q8TB33 94 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 Q9UF83 564 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 SAA4P35542 130 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 Q1T7F1 81 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 DGAT2L7PQ6IED9 249 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 DYNLRB2Q8TF09 96 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 GPR179Q6PRD1 2367 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 CCL21O00585 134 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 C9orf66Q5T8R8 295 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 Q6ZTC4 211 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 ARRDC1-AS1Q9H2J1 176 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 MOB4Q9Y3A3 225 aa5.72□□□□□ -1.49
CSDE1-214ENST00000530886 K7EQD1 137 aa5.71□□□□□ -1.49
CSDE1-214ENST00000530886 Q6ZSN1 163 aa5.71□□□□□ -1.49
CSDE1-214ENST00000530886 TMEM254Q8TBM7 123 aa5.71□□□□□ -1.49
CSDE1-214ENST00000530886 COX7B2Q8TF08 81 aa5.71□□□□□ -1.49
CSDE1-214ENST00000530886 ABCA2Q9BZC7 2435 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 PDE6GP18545 87 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 LPAL2Q16609 132 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 ZDBF2Q9HCK1 2354 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
CSDE1-214ENST00000530886 Q6ZVQ6 151 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 C6orf223Q8N319 242 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 Q96MF0 132 aa5.71□□□□□ -1.5
CSDE1-214ENST00000530886 ANKRD11Q6UB99 2663 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-214ENST00000530886 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
CSDE1-214ENST00000530886 CDC42SE2Q9NRR3 84 aa5.7□□□□□ -1.5
CSDE1-214ENST00000530886 A8MTW9 85 aa5.7□□□□□ -1.5
CSDE1-214ENST00000530886 K7EQG2 157 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 NREPQ16612 68 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 H3BQ85 93 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 C11orf71Q6IPW1 123 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 Q8N3U1 123 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 WNK2Q9Y3S1 2297 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 A0A096LNT2 108 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 IGHV4-38-2P0DP08 117 aa5.69□□□□□ -1.5
CSDE1-214ENST00000530886 IGHV3-73A0A0B4J1V6 119 aa5.68□□□□□ -1.5
CSDE1-214ENST00000530886 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
CSDE1-214ENST00000530886 PRYO14603 147 aa5.68□□□□□ -1.5
CSDE1-214ENST00000530886 Q6ZTI0 123 aa5.68□□□□□ -1.5
CSDE1-214ENST00000530886 CNOT1A5YKK6 2376 aaKnown RBP5.68□□□□□ -1.5
CSDE1-214ENST00000530886 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
CSDE1-214ENST00000530886 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
CSDE1-214ENST00000530886 APC2O95996 2303 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 LY6HO94772 140 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 LMO4P61968 165 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 C11orf44Q8N8P7 122 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 hDV103S1A0JD37 113 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 PAX4O43316 350 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 FUSP35637 526 aaKnown RBP eCLIP5.67□□□□□ -1.52e-9■□□□□ 9
CSDE1-214ENST00000530886 LINC00158P58513 81 aa5.67□□□□□ -1.5
CSDE1-214ENST00000530886 IGKV3-7A0A075B6H7 116 aa5.66□□□□□ -1.5
CSDE1-214ENST00000530886 DEFB109BQ30KR1 87 aa5.66□□□□□ -1.5
CSDE1-214ENST00000530886 NTM-AS1Q6ZSK4 140 aa5.66□□□□□ -1.5
CSDE1-214ENST00000530886 C11orf68Q9H3H3 251 aaKnown RBP5.66□□□□□ -1.5
CSDE1-214ENST00000530886 CUBNO60494 3623 aa5.66□□□□□ -1.5
CSDE1-214ENST00000530886 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
CSDE1-214ENST00000530886 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
CSDE1-214ENST00000530886 BPY2O14599 106 aa5.65□□□□□ -1.5
CSDE1-214ENST00000530886 ANK3Q12955 4377 aaKnown RBP5.65□□□□□ -1.51
CSDE1-214ENST00000530886 IGLV1-40P01703 118 aa5.65□□□□□ -1.51
CSDE1-214ENST00000530886 IGHV4-31P0DP07 118 aa5.65□□□□□ -1.51
CSDE1-214ENST00000530886 HAMPP81172 84 aa5.65□□□□□ -1.51
CSDE1-214ENST00000530886 PCNX1Q96RV3 2341 aa5.64□□□□□ -1.51
CSDE1-214ENST00000530886 BDP1A6H8Y1 2624 aa5.64□□□□□ -1.51
CSDE1-214ENST00000530886 LCE6AA0A183 80 aa5.64□□□□□ -1.51
CSDE1-214ENST00000530886 LINC00575Q6W349 94 aa5.64□□□□□ -1.51
CSDE1-214ENST00000530886 Q6ZRP5 223 aa5.64□□□□□ -1.51
CSDE1-214ENST00000530886 ZNF292O60281 2723 aa5.63□□□□□ -1.51
CSDE1-214ENST00000530886 A0A087WZ39 114 aa5.63□□□□□ -1.51
CSDE1-214ENST00000530886 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 M0R2N4 97 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 NCOR1O75376 2440 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 IGKV3-20P01619 116 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 DAD1P61803 113 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 BBC3Q96PG8 261 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-214ENST00000530886 RETNQ9HD89 108 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
CSDE1-214ENST00000530886 LYRM9A8MSI8 78 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 GRNP28799 593 aaKnown RBP5.61□□□□□ -1.51
CSDE1-214ENST00000530886 FBXL19-AS1Q494R0 122 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 CEP250Q9BV73 2442 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 IGHV3-11P01762 117 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 GNLYP22749 145 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 ZNF843Q8N446 348 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 ESM1Q9NQ30 184 aa5.61□□□□□ -1.51
CSDE1-214ENST00000530886 CACNA1BQ00975 2339 aa5.6□□□□□ -1.51
CSDE1-214ENST00000530886 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
CSDE1-214ENST00000530886 RP1L1Q8IWN7 2480 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-214ENST00000530886 COX17Q14061 63 aa5.59□□□□□ -1.51
CSDE1-214ENST00000530886 DEFB114Q30KQ6 69 aa5.59□□□□□ -1.51
CSDE1-214ENST00000530886 CD164L2Q6UWJ8 174 aa5.59□□□□□ -1.51
CSDE1-214ENST00000530886 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.51
CSDE1-214ENST00000530886 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
CSDE1-214ENST00000530886 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.51
CSDE1-214ENST00000530886 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms