RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 PROK1P58294 105 aa7.37□□□□□ -1.23
SREBF2-208ENST00000491541 CDKN2A-AS1Q9UH64 79 aa7.37□□□□□ -1.23
SREBF2-208ENST00000491541 C10orf105Q8TEF2 133 aa7.37□□□□□ -1.23
SREBF2-208ENST00000491541 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
SREBF2-208ENST00000491541 C4orf26Q17RF5 130 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 STHQ8IWL8 128 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
SREBF2-208ENST00000491541 CRPP02741 224 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 MUC7Q8TAX7 377 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 LRBAP50851 2863 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 BLCAPP62952 87 aa7.36□□□□□ -1.23
SREBF2-208ENST00000491541 IGHV1OR15-1A0A075B7D0 117 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 IGHV4-61A0A0C4DH41 118 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 DEFB131AP59861 70 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 DMXL1Q9Y485 3027 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 ADORA2A-AS1P86434 159 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
SREBF2-208ENST00000491541 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.23
SREBF2-208ENST00000491541 TRAV25A0A0B4J276 109 aa7.34□□□□□ -1.24
SREBF2-208ENST00000491541 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.24
SREBF2-208ENST00000491541 PRM2P04554 102 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 EDN2P20800 178 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 SMIM1B2RUZ4 78 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 MALP21145 153 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
SREBF2-208ENST00000491541 LINC00158P58513 81 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 DPH3Q96FX2 82 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 XCL2Q9UBD3 114 aa7.33□□□□□ -1.24
SREBF2-208ENST00000491541 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
SREBF2-208ENST00000491541 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 Q96MF0 132 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 ATRQ13535 2644 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 IGHV4-30-2A0A087WSY4 118 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 ERC2-IT1O76042 136 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 C9orf66Q5T8R8 295 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 LCE6AA0A183 80 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 USP17L23D6RBM5 183 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 DEFB136Q30KP8 78 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
SREBF2-208ENST00000491541 TRGV1A0A0A0MS02 117 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 TRBV10-1A0A0K0K1A3 114 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 LINC01356Q8N9X3 169 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 C20orf197Q8N268 126 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 C11orf68Q9H3H3 251 aaKnown RBP7.31□□□□□ -1.24
SREBF2-208ENST00000491541 LAMA5O15230 3695 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 SLPIP03973 132 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1A1P0DJD3 496 aaKnown RBP7.31□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1CP0DJD4 496 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1FQ15415 496 aaKnown RBP7.31□□□□□ -1.24
SREBF2-208ENST00000491541 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
SREBF2-208ENST00000491541 PAX4O43316 350 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 OXTP01178 125 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 TRGV4A0A0C4DH28 118 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 NCR3O14931 201 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 HIST2H2BDQ6DRA6 164 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 LECT2O14960 151 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 Q9UF83 564 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 A0A096LNT2 108 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 GHRHP01286 108 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 PFN2P35080 140 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 DEFB112Q30KQ8 113 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
SREBF2-208ENST00000491541 H3BQ85 93 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 LINC00612Q8N6U2 182 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 FAM218AQ96MZ4 157 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 C16orf95Q9H693 158 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 NDUFC2O95298 119 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 DSCR9P59020 149 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 ASH1LQ9NR48 2969 aaKnown RBP7.29□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1BA6NDE4 496 aaKnown RBP7.29□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1EA6NEQ0 496 aaKnown RBP7.29□□□□□ -1.24
SREBF2-208ENST00000491541 RBMY1DP0C7P1 496 aaKnown RBP7.29□□□□□ -1.24
SREBF2-208ENST00000491541 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
SREBF2-208ENST00000491541 H0YGX0 51 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 RPL36AP83881 106 aaKnown RBP7.28□□□□□ -1.24
SREBF2-208ENST00000491541 RPL36ALQ969Q0 106 aaKnown RBP7.28□□□□□ -1.24
SREBF2-208ENST00000491541 IGHV4-31P0DP07 118 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 LINC00846Q9NV44 126 aa7.28□□□□□ -1.24
SREBF2-208ENST00000491541 ANKRD17O75179 2603 aaKnown RBP7.27□□□□□ -1.24
SREBF2-208ENST00000491541 IGHV4-28A0A0C4DH34 117 aa7.27□□□□□ -1.25
SREBF2-208ENST00000491541 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.25
SREBF2-208ENST00000491541 MAST4O15021 2626 aa7.27□□□□□ -1.25
SREBF2-208ENST00000491541 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms