RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
MCF2L-229ENST00000488765 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
MCF2L-229ENST00000488765 FBN2P35556 2912 aa11.7□□□□□ -0.54
MCF2L-229ENST00000488765 KLLNB2CW77 178 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 F8WDY8 70 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 PRORYQ9H606 182 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
MCF2L-229ENST00000488765 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
MCF2L-229ENST00000488765 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
MCF2L-229ENST00000488765 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
MCF2L-229ENST00000488765 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
MCF2L-229ENST00000488765 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
MCF2L-229ENST00000488765 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
MCF2L-229ENST00000488765 NDUFA1O15239 70 aa11.66□□□□□ -0.54
MCF2L-229ENST00000488765 BRK1Q8WUW1 75 aa11.66□□□□□ -0.54
MCF2L-229ENST00000488765 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
MCF2L-229ENST00000488765 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
MCF2L-229ENST00000488765 IGHV1OR15-1A0A075B7D0 117 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 HIST2H2BDQ6DRA6 164 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 C9orf85Q96MD7 179 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
MCF2L-229ENST00000488765 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
MCF2L-229ENST00000488765 CRPP02741 224 aa11.64□□□□□ -0.55
MCF2L-229ENST00000488765 CCL19Q99731 98 aa11.64□□□□□ -0.55
MCF2L-229ENST00000488765 IGHV3OR16-12A0A075B7B8 117 aa11.63□□□□□ -0.55
MCF2L-229ENST00000488765 LMO4P61968 165 aa11.63□□□□□ -0.55
MCF2L-229ENST00000488765 MIR7-3HGQ8N6C7 128 aa11.63□□□□□ -0.55
MCF2L-229ENST00000488765 NIPBLQ6KC79 2804 aaeCLIP11.63□□□□□ -0.55
MCF2L-229ENST00000488765 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 CFHR3Q02985 330 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 PRO0628Q9UI54 55 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 XCL1P47992 114 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 XCL2Q9UBD3 114 aa11.62□□□□□ -0.55
MCF2L-229ENST00000488765 BLCAPP62952 87 aa11.61□□□□□ -0.55
MCF2L-229ENST00000488765 LINC00158P58513 81 aa11.61□□□□□ -0.55
MCF2L-229ENST00000488765 Q6JHZ5 121 aa11.61□□□□□ -0.55
MCF2L-229ENST00000488765 Q6ZTI0 123 aa11.61□□□□□ -0.55
MCF2L-229ENST00000488765 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 IGHV4-30-2A0A087WSY4 118 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 AVPP01185 164 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 RMI2Q96E14 147 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 SND1-IT1Q9HBX3 110 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 HELZ2Q9BYK8 2649 aaKnown RBP11.6□□□□□ -0.55
MCF2L-229ENST00000488765 APRG1Q8IVJ8 170 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
MCF2L-229ENST00000488765 NDUFA4O00483 81 aa11.59□□□□□ -0.55
MCF2L-229ENST00000488765 IGHV3-53P01767 116 aa11.59□□□□□ -0.55
MCF2L-229ENST00000488765 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
MCF2L-229ENST00000488765 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
MCF2L-229ENST00000488765 HIVEP2P31629 2446 aa11.59□□□□□ -0.55
MCF2L-229ENST00000488765 FN1P02751 2386 aaKnown RBP11.58□□□□□ -0.56
MCF2L-229ENST00000488765 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 H3BUX3 64 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 PAX4O43316 350 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 TIMM17BO60830 172 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 SS18Q15532 418 aa11.58□□□□□ -0.56
MCF2L-229ENST00000488765 FLNAP21333 2647 aaKnown RBP11.57□□□□□ -0.56
MCF2L-229ENST00000488765 SEC61GP60059 68 aa11.57□□□□□ -0.56
MCF2L-229ENST00000488765 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
MCF2L-229ENST00000488765 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
MCF2L-229ENST00000488765 RBM3P98179 157 aaKnown RBP11.56□□□□□ -0.56
MCF2L-229ENST00000488765 Q96MF0 132 aa11.56□□□□□ -0.56
MCF2L-229ENST00000488765 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
MCF2L-229ENST00000488765 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
MCF2L-229ENST00000488765 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
MCF2L-229ENST00000488765 MINOS1-NBL1R4GNA1 71 aa11.55□□□□□ -0.56
MCF2L-229ENST00000488765 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
MCF2L-229ENST00000488765 NBEAL2Q6ZNJ1 2754 aa11.55□□□□□ -0.56
MCF2L-229ENST00000488765 LYPD5Q6UWN5 251 aa11.54□□□□□ -0.56
MCF2L-229ENST00000488765 C19orf54Q5BKX5 351 aa11.54□□□□□ -0.56
MCF2L-229ENST00000488765 HAMPP81172 84 aa11.54□□□□□ -0.56
MCF2L-229ENST00000488765 C11orf72Q8NBR9 251 aa11.54□□□□□ -0.56
MCF2L-229ENST00000488765 F8WEM9 126 aa11.53□□□□□ -0.56
MCF2L-229ENST00000488765 TMEM86BQ8N661 226 aa11.53□□□□□ -0.56
MCF2L-229ENST00000488765 H7BZZ5 65 aa11.53□□□□□ -0.56
MCF2L-229ENST00000488765 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.57
MCF2L-229ENST00000488765 TRAV13-2A0A0B4J235 113 aa11.52□□□□□ -0.57
MCF2L-229ENST00000488765 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.57
MCF2L-229ENST00000488765 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
MCF2L-229ENST00000488765 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
MCF2L-229ENST00000488765 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
MCF2L-229ENST00000488765 AKAP9Q99996 3911 aa11.51□□□□□ -0.57
MCF2L-229ENST00000488765 NDUFC2O95298 119 aa11.51□□□□□ -0.57
MCF2L-229ENST00000488765 PSMB8P28062 276 aa11.51□□□□□ -0.57
MCF2L-229ENST00000488765 BBC3Q96PG8 261 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms