RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 NCR3O14931 201 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 ATP5EP2Q5VTU8 51 aa7.52□□□□□ -1.21
ABCF1-205ENST00000475993 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
ABCF1-205ENST00000475993 K7EQG2 157 aa7.52□□□□□ -1.21
ABCF1-205ENST00000475993 KLKP1Q107X0 134 aa7.52□□□□□ -1.21
ABCF1-205ENST00000475993 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
ABCF1-205ENST00000475993 ASH1LQ9NR48 2969 aaKnown RBP7.51□□□□□ -1.21
ABCF1-205ENST00000475993 SPTBN1Q01082 2364 aaKnown RBP7.51□□□□□ -1.21
ABCF1-205ENST00000475993 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
ABCF1-205ENST00000475993 LECT2O14960 151 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 IGHV3-53P01767 116 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 A0A087WZ39 114 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 IGLV1-40P01703 118 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 Q6ZRU5 148 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 SORL1Q92673 2214 aa7.5□□□□□ -1.21
ABCF1-205ENST00000475993 FBXL19-AS1Q494R0 122 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 HTN1P15515 57 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 BLCAPP62952 87 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 MIR7-3HGQ8N6C7 128 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 NBASA2RRP1 2371 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 HRNRQ86YZ3 2850 aaPredicted RBP7.49□□□□□ -1.21
ABCF1-205ENST00000475993 PLAC8L1A1L4L8 177 aa7.49□□□□□ -1.21
ABCF1-205ENST00000475993 MRPL55Q7Z7F7 128 aaKnown RBP7.49□□□□□ -1.21
ABCF1-205ENST00000475993 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
ABCF1-205ENST00000475993 CFHR3Q02985 330 aa7.48□□□□□ -1.21
ABCF1-205ENST00000475993 STHQ8IWL8 128 aa7.48□□□□□ -1.21
ABCF1-205ENST00000475993 ZFHX2Q9C0A1 2572 aaPredicted RBP7.48□□□□□ -1.21
ABCF1-205ENST00000475993 PRM2P04554 102 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 SLPIP03973 132 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 DAD1P61803 113 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 LMO4P61968 165 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 C1orf158Q8N1D5 194 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 ORMDL1Q9P0S3 153 aa7.47□□□□□ -1.21
ABCF1-205ENST00000475993 RPL36AP83881 106 aaKnown RBP7.46□□□□□ -1.21
ABCF1-205ENST00000475993 ACACAQ13085 2346 aa7.46□□□□□ -1.21
ABCF1-205ENST00000475993 ANKRD11Q6UB99 2663 aaPredicted RBP7.46□□□□□ -1.21
ABCF1-205ENST00000475993 RPL36ALQ969Q0 106 aaKnown RBP7.46□□□□□ -1.21
ABCF1-205ENST00000475993 TRAV10A0A0B4J240 114 aa7.46□□□□□ -1.22
ABCF1-205ENST00000475993 SPTA1P02549 2419 aa7.46□□□□□ -1.22
ABCF1-205ENST00000475993 BCE1O60756 84 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 CCL18P55774 89 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 C6orf223Q8N319 242 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 COL6A6A6NMZ7 2263 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
ABCF1-205ENST00000475993 LY6EQ16553 131 aa7.44□□□□□ -1.22
ABCF1-205ENST00000475993 BRD3OSQ6XYD6 125 aa7.44□□□□□ -1.22
ABCF1-205ENST00000475993 C11orf72Q8NBR9 251 aa7.44□□□□□ -1.22
ABCF1-205ENST00000475993 COX7B2Q8TF08 81 aa7.44□□□□□ -1.22
ABCF1-205ENST00000475993 A8MTW9 85 aa7.43□□□□□ -1.22
ABCF1-205ENST00000475993 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
ABCF1-205ENST00000475993 AKAP13Q12802 2813 aa7.43□□□□□ -1.22
ABCF1-205ENST00000475993 A6NDX4 124 aa7.43□□□□□ -1.22
ABCF1-205ENST00000475993 LY6G6DO95868 133 aa7.43□□□□□ -1.22
ABCF1-205ENST00000475993 ADORA2A-AS1P86434 159 aa7.43□□□□□ -1.22
ABCF1-205ENST00000475993 NDUFC1O43677 76 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 LINC00158P58513 81 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 MIFP14174 115 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 ESRGQ1W209 222 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
ABCF1-205ENST00000475993 UBL5Q9BZL1 73 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 LRCOL1A6NCL2 159 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 H3BUX3 64 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 IBA57-AS1B1ANH7 110 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 PRB1P04280 392 aa7.41□□□□□ -1.22
ABCF1-205ENST00000475993 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
ABCF1-205ENST00000475993 A0A1W2PPR1 153 aa7.4□□□□□ -1.23
ABCF1-205ENST00000475993 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 TM2D3Q9BRN9 247 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 CELSR1Q9NYQ6 3014 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 K7EQD1 137 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 OTOGLQ3ZCN5 2332 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 TOMM7Q9P0U1 55 aa7.39□□□□□ -1.23
ABCF1-205ENST00000475993 Q6ZTI0 123 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 Q8N814 137 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 DEFB131AP59861 70 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 HAMPP81172 84 aa7.38□□□□□ -1.23
ABCF1-205ENST00000475993 SPTAN1Q13813 2472 aaKnown RBP7.37□□□□□ -1.23
ABCF1-205ENST00000475993 PSPHP1O15172 72 aa7.37□□□□□ -1.23
ABCF1-205ENST00000475993 IGHV4-38-2P0DP08 117 aa7.37□□□□□ -1.23
ABCF1-205ENST00000475993 ABCA2Q9BZC7 2435 aa7.37□□□□□ -1.23
ABCF1-205ENST00000475993 A0A096LNT2 108 aa7.37□□□□□ -1.23
ABCF1-205ENST00000475993 C11orf68Q9H3H3 251 aaKnown RBP7.37□□□□□ -1.23
ABCF1-205ENST00000475993 C10orf99Q6UWK7 81 aa7.36□□□□□ -1.23
ABCF1-205ENST00000475993 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
ABCF1-205ENST00000475993 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
ABCF1-205ENST00000475993 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
ABCF1-205ENST00000475993 RNASE1P07998 156 aaKnown RBP7.35□□□□□ -1.23
ABCF1-205ENST00000475993 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
ABCF1-205ENST00000475993 UBE2L6O14933 153 aa7.34□□□□□ -1.23
ABCF1-205ENST00000475993 FUSP35637 526 aaKnown RBP eCLIP7.34□□□□□ -1.23
ABCF1-205ENST00000475993 Q6ZQT0 140 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms