RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 COX6B1P14854 86 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 SPRR1BP22528 89 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 ATP5EP56381 51 aaPredicted RBP-0.14□□□□□ -2.43
SSB-207ENST00000465871 PPP3R1P63098 170 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 SARNPP82979 210 aaKnown RBP-0.14□□□□□ -2.43
SSB-207ENST00000465871 KRTAP19-7Q3SYF9 63 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 C10orf113Q5VZT2 155 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 CDC42SE2Q9NRR3 84 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 GNG8Q9UK08 70 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 LPAP08519 4548 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 HECTD4Q9Y4D8 3996 aa-0.14□□□□□ -2.43
SSB-207ENST00000465871 WDR7Q9Y4E6 1490 aa-0.15□□□□□ -2.43
SSB-207ENST00000465871 GNG4P50150 75 aa-0.15□□□□□ -2.43
SSB-207ENST00000465871 Q0VG73 95 aa-0.15□□□□□ -2.43
SSB-207ENST00000465871 IER3IP1Q9Y5U9 82 aa-0.15□□□□□ -2.43
SSB-207ENST00000465871 BCL9LQ86UU0 1499 aa-0.16□□□□□ -2.43
SSB-207ENST00000465871 PAPPAQ13219 1627 aa-0.16□□□□□ -2.43
SSB-207ENST00000465871 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.43
SSB-207ENST00000465871 KDM5AP29375 1690 aaKnown RBP-0.16□□□□□ -2.44
SSB-207ENST00000465871 ROBO1Q9Y6N7 1651 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 A0A1B0GWA3 101 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 NAP1L6A6NFF2 107 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 CORTO00230 105 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 SNCAP37840 140 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 FAM167A-AS1Q96KT0 104 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 C12orf57Q99622 126 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 SCAPERQ9BY12 1400 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 MYOM2P54296 1465 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 ZFHX3Q15911 3703 aa-0.16□□□□□ -2.44
SSB-207ENST00000465871 MYCBP2O75592 4640 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 ARHGEF12Q9NZN5 1544 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 URB1O60287 2271 aaKnown RBP-0.17□□□□□ -2.44
SSB-207ENST00000465871 SPTA1P02549 2419 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 TRBV7-4A0A0J9YYF1 115 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 CRYM-AS1A6NIL9 109 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 APC2O95996 2303 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 COX6CP09669 75 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 SPRR4Q96PI1 79 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 NSD3Q9BZ95 1437 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 PRO1933Q9H354 126 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 PRO1854Q9UHT4 67 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 WNK1Q9H4A3 2382 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 ANKRD17O75179 2603 aaKnown RBP-0.17□□□□□ -2.44
SSB-207ENST00000465871 ATRQ13535 2644 aa-0.17□□□□□ -2.44
SSB-207ENST00000465871 SMG6Q86US8 1419 aaKnown RBP-0.18□□□□□ -2.44
SSB-207ENST00000465871 SYS1-DBNDD2H3BUS1 97 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 MRPS10P82664 201 aaKnown RBP-0.18□□□□□ -2.44
SSB-207ENST00000465871 DEFB123Q8N688 67 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 LINC01600Q96MT4 127 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 ALMS1Q8TCU4 4167 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 RAPGEF6Q8TEU7 1601 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 QRICH2Q9H0J4 1663 aa-0.18□□□□□ -2.44
SSB-207ENST00000465871 LRP2P98164 4655 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 TCHHQ07283 1943 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 LINC00959A0A1B0GUT2 108 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 FAM223BA6NKX1 122 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 SPINK4O60575 86 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 GTF2H5Q6ZYL4 71 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 LCN9Q8WX39 176 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 TMEM203Q969S6 136 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 C2orf88Q9BSF0 95 aa-0.19□□□□□ -2.44
SSB-207ENST00000465871 MYOM1P52179 1685 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 CHD8Q9HCK8 2581 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 NALCNQ8IZF0 1738 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 LINC00587B1AMM8 73 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 KRTDAPP60985 99 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 UBE2D3P61077 147 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 UBE2D2P62837 147 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 KLK9Q2XQG4 91 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 DEFB105AQ8NG35 78 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 HMGXB3Q12766 1538 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 TNXBP22105 4242 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 TSC2P49815 1807 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 GPR98Q8WXG9 6306 aa-0.2□□□□□ -2.44
SSB-207ENST00000465871 CUL7Q14999 1698 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 GAPVD1Q14C86 1478 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 MAP1AP78559 2803 aaPredicted RBP-0.21□□□□□ -2.44
SSB-207ENST00000465871 SAA2P0DJI9 122 aaPredicted RBP-0.21□□□□□ -2.44
SSB-207ENST00000465871 COX8AP10176 69 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 SEC11AP67812 179 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 KRTAP19-8Q3LI54 63 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 USMG5Q96IX5 58 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 SYNE2Q8WXH0 6885 aaKnown RBP-0.21□□□□□ -2.44
SSB-207ENST00000465871 TET3O43151 1660 aa-0.21□□□□□ -2.44
SSB-207ENST00000465871 MAGI1Q96QZ7 1491 aaPredicted RBP-0.22□□□□□ -2.44
SSB-207ENST00000465871 EHBP1L1Q8N3D4 1523 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 STAB2Q8WWQ8 2551 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 ARHGEF5Q12774 1597 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 SETXQ7Z333 2677 aaKnown RBP-0.22□□□□□ -2.44
SSB-207ENST00000465871 MUC2Q02817 5179 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 H3BQ15 152 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 KRTAP20-2Q3LI61 65 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 VAMP8Q9BV40 100 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 SRRM2Q9UQ35 2752 aaKnown RBP-0.22□□□□□ -2.44
SSB-207ENST00000465871 ACANP16112 2415 aa-0.22□□□□□ -2.44
SSB-207ENST00000465871 DNAJC13O75165 2243 aa-0.22□□□□□ -2.45
SSB-207ENST00000465871 DSTQ03001 7570 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms