RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RABAC1Q9UI14 185 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 V9GYV3 84 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 IQSEC2Q5JU85 1478 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 KIF21AQ7Z4S6 1674 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 JMJD1CQ15652 2540 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 ZNF236Q9UL36 1845 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 DNAJC13O75165 2243 aa1.21□□□□□ -2.21
HMGB3P31-201ENST00000413333 MYO18BQ8IUG5 2567 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 NUP188Q5SRE5 1749 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 CCDC88BA6NC98 1476 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 UQCRHLA0A096LP55 91 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 A0A0G2JND7 137 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 LOC285095A0A1B0GVY8 99 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 IGLC7A0M8Q6 106 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 FXYD1O00168 92 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 CAV3P56539 151 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 SPAG11AQ6PDA7 123 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 C10orf99Q6UWK7 81 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 AMELXQ99217 191 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 WFDC6Q9BQY6 131 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 NXT2Q9NPJ8 142 aaKnown RBP1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 V9GYH0 126 aa1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 TNRC18O15417 2968 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P31-201ENST00000413333 NOTCH1P46531 2555 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 PPRC1Q5VV67 1664 aaKnown RBP1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 GCN1Q92616 2671 aaKnown RBP1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 TRBV25-1A0A075B6N4 114 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 S100A13Q99584 98 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 TMEM14BQ9NUH8 114 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 HIGD1BQ9P298 99 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 EDC4Q6P2E9 1401 aaKnown RBP1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 TENM1Q9UKZ4 2725 aa1.2□□□□□ -2.22
HMGB3P31-201ENST00000413333 CADP27708 2225 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 ANKHD1Q8IWZ3 2542 aaKnown RBP1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 FBN3Q75N90 2809 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 BCE1O60756 84 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 UQCRHP07919 91 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 SFTA2Q6UW10 78 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 FAM223AQ8IWN6 122 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 LINC01600Q96MT4 127 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 CFAP74Q9C0B2 1584 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 R4GMQ9 66 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 KALRNO60229 2985 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 MYO9AB2RTY4 2548 aa1.19□□□□□ -2.22
HMGB3P31-201ENST00000413333 TMEM131LA2VDJ0 1609 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 F8VRH5 84 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 SAA2P0DJI9 122 aaPredicted RBP1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 ETDBQ3ZM63 59 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 TMEM170BQ5T4T1 132 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 ALKAL2Q6UX46 152 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 ZMYM4Q5VZL5 1548 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 PTPN23Q9H3S7 1636 aa1.18□□□□□ -2.22
HMGB3P31-201ENST00000413333 ABCA8O94911 1581 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 ABCC2Q92887 1545 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 A0A096LNT2 108 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 TRGV1A0A0A0MS02 117 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 M0R135 149 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 PMCHL1Q16048 86 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 BAGE3Q86Y29 109 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 SPCS1Q9Y6A9 102 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 CCDC141Q6ZP82 1450 aa1.17□□□□□ -2.22
HMGB3P31-201ENST00000413333 RGPD2P0DJD1 1756 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 KDM3BQ7LBC6 1761 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ERICH3Q5RHP9 1530 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 NCOR2Q9Y618 2525 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 RAPGEF6Q8TEU7 1601 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 AHCTF1Q8WYP5 2266 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 FAM223BA6NKX1 122 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 F2Z2F3 143 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 UQCR11O14957 56 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 SPINT3P49223 89 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 WFDC2Q14508 124 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ZNF720Q7Z2F6 126 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 BAGE2Q86Y30 109 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ST20Q9HBF5 79 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ARL2-SNX15V9GYD0 113 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ANKRD36A6QL64 1941 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 SPTBN4Q9H254 2564 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 ASXL3Q9C0F0 2248 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 SHPRHQ149N8 1683 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 RGPD8O14715 1765 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 LTN1O94822 1766 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 RGPD5Q99666 1765 aa1.16□□□□□ -2.22
HMGB3P31-201ENST00000413333 MAP1BP46821 2468 aaKnown RBP1.15□□□□□ -2.22
HMGB3P31-201ENST00000413333 CCDC168Q8NDH2 2452 aa1.15□□□□□ -2.22
HMGB3P31-201ENST00000413333 KCPQ6ZWJ8 1503 aa1.15□□□□□ -2.22
HMGB3P31-201ENST00000413333 TRAV1-2A0A0B4J238 106 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZNF137PP52743 207 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 NMSQ5H8A3 153 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 PSMG4Q5JS54 123 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 ADAMTS12P58397 1594 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 ZC3H13Q5T200 1668 aaKnown RBP1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 CRYBG1Q9Y4K1 1723 aa1.15□□□□□ -2.23
HMGB3P31-201ENST00000413333 NEXMIFQ5QGS0 1516 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms