RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
IFT88-201ENST00000319980 A0A096LPF7 62 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 IGLV4-60A0A075B6I1 120 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 H3BMG7 143 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
IFT88-201ENST00000319980 IGHV4-28A0A0C4DH34 117 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 H7C423 109 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 TSPAN13O95857 204 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
IFT88-201ENST00000319980 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 LITAFQ99732 161 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 LYRM9A8MSI8 78 aa5.3□□□□□ -1.56
IFT88-201ENST00000319980 ZNF625Q96I27 306 aaPredicted RBP5.3□□□□□ -1.56
IFT88-201ENST00000319980 SMIM1B2RUZ4 78 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 NPC2P61916 151 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 PRO1854Q9UHT4 67 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 TMEM262E9PQX1 116 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 PAX4O43316 350 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 DAND5Q8N907 189 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 Q9H8V8 135 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 FBN1P35555 2871 aaKnown RBP5.29□□□□□ -1.56
IFT88-201ENST00000319980 DAD1P61803 113 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 KRTAP24-1Q3LI83 254 aa5.29□□□□□ -1.56
IFT88-201ENST00000319980 STAB1Q9NY15 2570 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 H7C2G1 150 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 WIPF1O43516 503 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 F5H768 121 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 NDUFA1O15239 70 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 Q8NAQ8 132 aa5.28□□□□□ -1.56
IFT88-201ENST00000319980 MIFP14174 115 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 MIAQ16674 131 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
IFT88-201ENST00000319980 HTN3P15516 51 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 CIRBPQ14011 172 aaKnown RBP5.27□□□□□ -1.57
IFT88-201ENST00000319980 C3orf56Q8N813 242 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 RNF183Q96D59 192 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 SPANXDQ9BXN6 97 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 SPANXCQ9NY87 97 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 CBY1Q9Y3M2 126 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 TRAV26-1A0A087WT03 109 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 PSMB2P49721 201 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 WFDC2Q14508 124 aa5.27□□□□□ -1.57
IFT88-201ENST00000319980 A0A0B4J2C4 111 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 F8W1H4 67 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 K7ERU9 68 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 IGHV3-33P01772 117 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 ATP5G1P05496 136 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 SPART-AS1P0CW21 52 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 RBX1P62877 108 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 TOMM7Q9P0U1 55 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 ERG28Q9UKR5 140 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 Q1RN00 199 aa5.26□□□□□ -1.57
IFT88-201ENST00000319980 FBN3Q75N90 2809 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 H3BS24 57 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 TIMM17BO60830 172 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 KRTAP10-11P60412 298 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 MEIG1Q5JSS6 88 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 CLPSL2Q6UWE3 100 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 C5orf38Q86SI9 138 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 LINC00959A0A1B0GUT2 108 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 LYRM7Q5U5X0 104 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 PKD1L1Q8TDX9 2849 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 TCL1BO95988 128 aa5.25□□□□□ -1.57
IFT88-201ENST00000319980 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 XCL1P47992 114 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 ETDBQ3ZM63 59 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 SH2D6Q7Z4S9 175 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 TEX48A0A1B0GUV7 120 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 USP17L23D6RBM5 183 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 IFITM1P13164 125 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 LINC00308Q8TCZ7 52 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 COX7B2Q8TF08 81 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 PRO0461Q9UI25 63 aa5.24□□□□□ -1.57
IFT88-201ENST00000319980 TRBV20-1A0A075B6N2 111 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 HERV-K104P63124 156 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 Q8N3U1 123 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 RETNQ9HD89 108 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 A0A087WZ39 114 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 SHISA2Q6UWI4 295 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
IFT88-201ENST00000319980 SS18Q15532 418 aa5.22□□□□□ -1.57
IFT88-201ENST00000319980 MRPL23Q16540 153 aaKnown RBP5.22□□□□□ -1.57
IFT88-201ENST00000319980 LINC00269Q8N2A0 174 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms