RNA–Protein interactions for RNA: ENST00000216420.11

CGRRF1-201, Transcript of cell growth regulator with ring finger domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGRRF1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-201ENST00000216420 ENHOQ6UWT2 76 aa12.99□□□□□ -0.33
CGRRF1-201ENST00000216420 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
CGRRF1-201ENST00000216420 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
CGRRF1-201ENST00000216420 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
CGRRF1-201ENST00000216420 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
CGRRF1-201ENST00000216420 INSP01308 110 aa12.97□□□□□ -0.33
CGRRF1-201ENST00000216420 LINC00336Q6ZUF6 198 aa12.96□□□□□ -0.33
CGRRF1-201ENST00000216420 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
CGRRF1-201ENST00000216420 ATMQ13315 3056 aa12.95□□□□□ -0.34
CGRRF1-201ENST00000216420 PAX4O43316 350 aa12.95□□□□□ -0.34
CGRRF1-201ENST00000216420 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 SMIM26A0A096LP01 95 aa12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 C10orf99Q6UWK7 81 aa12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 Q8N814 137 aa12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 C16orf95Q9H693 158 aa12.94□□□□□ -0.34
CGRRF1-201ENST00000216420 AKAP13Q12802 2813 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 SORL1Q92673 2214 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 UBE2L6O14933 153 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
CGRRF1-201ENST00000216420 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
CGRRF1-201ENST00000216420 LAMA5O15230 3695 aa12.91□□□□□ -0.34
CGRRF1-201ENST00000216420 A0A087WZ39 114 aa12.91□□□□□ -0.34
CGRRF1-201ENST00000216420 LINC00482Q8N8I6 264 aa12.91□□□□□ -0.34
CGRRF1-201ENST00000216420 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
CGRRF1-201ENST00000216420 IGHV4-61A0A0C4DH41 118 aa12.9□□□□□ -0.34
CGRRF1-201ENST00000216420 UBE2E2Q96LR5 201 aa12.9□□□□□ -0.34
CGRRF1-201ENST00000216420 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
CGRRF1-201ENST00000216420 J3QLI3 93 aa12.89□□□□□ -0.35
CGRRF1-201ENST00000216420 NANOS2P60321 138 aaKnown RBP12.89□□□□□ -0.35
CGRRF1-201ENST00000216420 A0A096LNT2 108 aa12.89□□□□□ -0.35
CGRRF1-201ENST00000216420 FP248Q71RG6 208 aaPredicted RBP12.89□□□□□ -0.35
CGRRF1-201ENST00000216420 LOC110117498A0A087WWA1 95 aa12.88□□□□□ -0.35
CGRRF1-201ENST00000216420 TRGV1A0A0A0MS02 117 aa12.87□□□□□ -0.35
CGRRF1-201ENST00000216420 ATP5EP56381 51 aaPredicted RBP12.87□□□□□ -0.35
CGRRF1-201ENST00000216420 NDUFC1O43677 76 aa12.87□□□□□ -0.35
CGRRF1-201ENST00000216420 Q6ZQT0 140 aa12.87□□□□□ -0.35
CGRRF1-201ENST00000216420 TLN1Q9Y490 2541 aaKnown RBP12.86□□□□□ -0.35
CGRRF1-201ENST00000216420 F8WDY8 70 aa12.85□□□□□ -0.35
CGRRF1-201ENST00000216420 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
CGRRF1-201ENST00000216420 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
CGRRF1-201ENST00000216420 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
CGRRF1-201ENST00000216420 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
CGRRF1-201ENST00000216420 LINC01547P58512 204 aaPredicted RBP12.83□□□□□ -0.36
CGRRF1-201ENST00000216420 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
CGRRF1-201ENST00000216420 NBL1P41271 181 aa12.82□□□□□ -0.36
CGRRF1-201ENST00000216420 CXCL6P80162 114 aa12.82□□□□□ -0.36
CGRRF1-201ENST00000216420 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
CGRRF1-201ENST00000216420 MSMBP08118 114 aa12.82□□□□□ -0.36
CGRRF1-201ENST00000216420 Q6ZTI0 123 aa12.82□□□□□ -0.36
CGRRF1-201ENST00000216420 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
CGRRF1-201ENST00000216420 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
CGRRF1-201ENST00000216420 C6orf223Q8N319 242 aa12.81□□□□□ -0.36
CGRRF1-201ENST00000216420 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
CGRRF1-201ENST00000216420 C1orf43Q9BWL3 253 aa12.81□□□□□ -0.36
CGRRF1-201ENST00000216420 RELNP78509 3460 aa12.8□□□□□ -0.36
CGRRF1-201ENST00000216420 F8WEM9 126 aa12.8□□□□□ -0.36
CGRRF1-201ENST00000216420 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
CGRRF1-201ENST00000216420 SLURP1P55000 103 aa12.8□□□□□ -0.36
CGRRF1-201ENST00000216420 RBM3P98179 157 aaKnown RBP12.8□□□□□ -0.36
CGRRF1-201ENST00000216420 IGLV4-60A0A075B6I1 120 aa12.79□□□□□ -0.36
CGRRF1-201ENST00000216420 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
CGRRF1-201ENST00000216420 RMI2Q96E14 147 aa12.79□□□□□ -0.36
CGRRF1-201ENST00000216420 Q8IZM0 81 aa12.79□□□□□ -0.36
CGRRF1-201ENST00000216420 AVPP01185 164 aa12.78□□□□□ -0.36
CGRRF1-201ENST00000216420 C6orf226Q5I0X4 101 aa12.78□□□□□ -0.36
CGRRF1-201ENST00000216420 Q6ZVQ6 151 aa12.78□□□□□ -0.36
CGRRF1-201ENST00000216420 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.36
CGRRF1-201ENST00000216420 PDE6GP18545 87 aa12.77□□□□□ -0.36
CGRRF1-201ENST00000216420 C9orf66Q5T8R8 295 aa12.77□□□□□ -0.36
CGRRF1-201ENST00000216420 RPL35AP18077 110 aaKnown RBP12.77□□□□□ -0.37
CGRRF1-201ENST00000216420 LINC00575Q6W349 94 aa12.77□□□□□ -0.37
CGRRF1-201ENST00000216420 DEFB112Q30KQ8 113 aa12.76□□□□□ -0.37
CGRRF1-201ENST00000216420 SNURFQ9Y675 71 aa12.76□□□□□ -0.37
CGRRF1-201ENST00000216420 TRBV7-4A0A0J9YYF1 115 aa12.76□□□□□ -0.37
CGRRF1-201ENST00000216420 TRBV6-8A0A0A6YYG3 113 aa12.75□□□□□ -0.37
CGRRF1-201ENST00000216420 LINC00959A0A1B0GUT2 108 aa12.75□□□□□ -0.37
CGRRF1-201ENST00000216420 H3BQ85 93 aa12.75□□□□□ -0.37
CGRRF1-201ENST00000216420 IGKV3OR2-268A0A0C4DH90 116 aa12.74□□□□□ -0.37
CGRRF1-201ENST00000216420 COX17Q14061 63 aa12.74□□□□□ -0.37
CGRRF1-201ENST00000216420 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
CGRRF1-201ENST00000216420 ERC2-IT1O76042 136 aa12.74□□□□□ -0.37
CGRRF1-201ENST00000216420 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
CGRRF1-201ENST00000216420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.37
CGRRF1-201ENST00000216420 ZNF292O60281 2723 aa12.72□□□□□ -0.37
CGRRF1-201ENST00000216420 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
CGRRF1-201ENST00000216420 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.37
CGRRF1-201ENST00000216420 HAMPP81172 84 aa12.71□□□□□ -0.37
CGRRF1-201ENST00000216420 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.37
CGRRF1-201ENST00000216420 B4DSR2 109 aa12.71□□□□□ -0.38
CGRRF1-201ENST00000216420 C6orf99Q4VX62 202 aa12.71□□□□□ -0.38
CGRRF1-201ENST00000216420 STHQ8IWL8 128 aa12.71□□□□□ -0.38
CGRRF1-201ENST00000216420 IGHV4-30-2A0A087WSY4 118 aa12.7□□□□□ -0.38
CGRRF1-201ENST00000216420 M0R2N4 97 aa12.7□□□□□ -0.38
CGRRF1-201ENST00000216420 MIFP14174 115 aa12.7□□□□□ -0.38
CGRRF1-201ENST00000216420 PRR3P79522 188 aaKnown RBP12.7□□□□□ -0.38
CGRRF1-201ENST00000216420 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
CGRRF1-201ENST00000216420 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms