RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 DNAH14Q0VDD8 3507 aa3.93□□□□□ -1.78
LINC01538-201ENST00000588074 BRWD1Q9NSI6 2320 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 DMDP11532 3685 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV3-43A0A0B4J1X8 118 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV3-43DP0DP04 118 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 PRRC2AP48634 2157 aaKnown RBP3.92□□□□□ -1.78
LINC01538-201ENST00000588074 CACNA1DQ01668 2161 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 PSCAO43653 123 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 SAA1P0DJI8 122 aaPredicted RBP3.92□□□□□ -1.78
LINC01538-201ENST00000588074 LINC00308Q8TCZ7 52 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
LINC01538-201ENST00000588074 IGKV3D-11A0A0A0MRZ8 115 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV7-4-1A0A0J9YVY3 117 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 DEFB108AA8MXU0 73 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 LYZP61626 148 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 Q8N1X5 172 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 C1orf64Q8NEQ6 169 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 CCL4L1Q8NHW4 92 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 IGHV3OR16-13A0A075B7E8 117 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 NDPQ00604 133 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
LINC01538-201ENST00000588074 HCP5Q6MZN7 132 aa3.91□□□□□ -1.78
LINC01538-201ENST00000588074 TRAV21A0A0B4J279 112 aa3.9□□□□□ -1.78
LINC01538-201ENST00000588074 NDUFA1O15239 70 aa3.9□□□□□ -1.78
LINC01538-201ENST00000588074 SMIM29Q86T20 159 aa3.9□□□□□ -1.78
LINC01538-201ENST00000588074 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.78
LINC01538-201ENST00000588074 TMEM167AQ8TBQ9 72 aa3.9□□□□□ -1.78
LINC01538-201ENST00000588074 A0A087X002 238 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV3-16A0A0C4DH30 117 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 NCR3O14931 201 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 IGKV1-16P04430 117 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 PRM2P04554 102 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 Q8N3U1 123 aa3.9□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGKV2-40A0A087WW87 121 aaPredicted RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGKV3D-20A0A0C4DH25 116 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 A8MU10 97 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGKV2D-40P01614 121 aaPredicted RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 SAA2P0DJI9 122 aaPredicted RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 POLR2KP53803 58 aaKnown RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 WT1-ASQ06250 92 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 DEFB126Q9BYW3 111 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 DIDO1Q9BTC0 2240 aaKnown RBP3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV3-64A0A075B6Q5 118 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV4-30-2A0A087WSY4 118 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 C3orf84H3BNL1 204 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 LINC00167Q96N53 147 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
LINC01538-201ENST00000588074 NOTCH4Q99466 2003 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 SPEGQ15772 3267 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 VPS13AQ96RL7 3174 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 IGLV3-12A0A075B6K2 115 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 BPY2O14599 106 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 C9orf66Q5T8R8 295 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
LINC01538-201ENST00000588074 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 C9orf116Q5BN46 136 aaPredicted RBP3.87□□□□□ -1.79
LINC01538-201ENST00000588074 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 DEC1Q9P2X7 70 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 FREM1Q5H8C1 2179 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 A0A087WYN8 130 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 A0A0J9YXV3 536 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 CRPP02741 224 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 RPL39P62891 51 aaKnown RBP3.87□□□□□ -1.79
LINC01538-201ENST00000588074 RPS21P63220 83 aaKnown RBP3.87□□□□□ -1.79
LINC01538-201ENST00000588074 Q8TAT8 98 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 ZNF407Q9C0G0 2248 aa3.87□□□□□ -1.79
LINC01538-201ENST00000588074 LOC110117498A0A087WWA1 95 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 CDC42SE2Q9NRR3 84 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 LOC101927531A0A1B0GV80 90 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 PDE6GP18545 87 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
LINC01538-201ENST00000588074 DEFB110Q30KQ9 67 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 C11orf71Q6IPW1 123 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 C9orf106Q8NAJ2 232 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 ZNF580Q9UK33 172 aa3.86□□□□□ -1.79
LINC01538-201ENST00000588074 LCE6AA0A183 80 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV3-48P01763 117 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 MOBPQ13875 183 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 DEFB119Q8N690 84 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 PCNX2A6NKB5 2137 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 ARHGAP32A7KAX9 2087 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 TTC28Q96AY4 2481 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 IGLV3-9A0A075B6K5 115 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms