RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 PDE4DIPQ5VU43 2346 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 TNCP24821 2201 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 TRAV23DV6A0A075B6W5 121 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 LOC110117498A0A087WWA1 95 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 IGHV3-16A0A0C4DH30 117 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 A0A0U1RQV1 116 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 H3BUA1 57 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 K7EMT4 169 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 MIFP14174 115 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 Q1T7F1 81 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 IGFL2Q6UWQ7 119 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 LYPD2Q6UXB3 125 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 Q8N2B8 174 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 USMG5Q96IX5 58 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 C14orf132Q9NPU4 83 aa4.12□□□□□ -1.75
DDX42-210ENST00000579539 RAI1Q7Z5J4 1906 aaPredicted RBP4.12□□□□□ -1.75
DDX42-210ENST00000579539 IGHV3OR16-12A0A075B7B8 117 aa4.11□□□□□ -1.75
DDX42-210ENST00000579539 ESRGQ1W209 222 aa4.11□□□□□ -1.75
DDX42-210ENST00000579539 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
DDX42-210ENST00000579539 WFDC11Q8NEX6 87 aa4.11□□□□□ -1.75
DDX42-210ENST00000579539 RNASE6Q93091 150 aaKnown RBP4.11□□□□□ -1.75
DDX42-210ENST00000579539 ZNF625Q96I27 306 aaPredicted RBP4.11□□□□□ -1.75
DDX42-210ENST00000579539 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
DDX42-210ENST00000579539 C11orf68Q9H3H3 251 aaKnown RBP4.11□□□□□ -1.75
DDX42-210ENST00000579539 F5P12259 2224 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 IGHV1OR15-1A0A075B7D0 117 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 IGHV4-30-2A0A087WSY4 118 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 A0A087WVE0 104 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 A0A087X002 238 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 IGHV7-81A0A0B4J1V7 117 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 ODF3BA8MYP8 253 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 PRR9Q5T870 116 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 ENHOQ6UWT2 76 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 CLEC19AQ6UXS0 136 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 CDKN2A-AS1Q9UH64 79 aa4.1□□□□□ -1.75
DDX42-210ENST00000579539 MED12Q93074 2177 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 KNTC1P50748 2209 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 CABIN1Q9Y6J0 2220 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 LOC100131303A0A0U1RQF7 123 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 F8WEM9 126 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
DDX42-210ENST00000579539 MIR7-3HGQ8N6C7 128 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 LINC01560Q8TB33 94 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
DDX42-210ENST00000579539 A0A1B0GW54 56 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 CCL21O00585 134 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 NDUFS5O43920 106 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 COX7A1P24310 79 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
DDX42-210ENST00000579539 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 MRPL55Q7Z7F7 128 aaKnown RBP4.08□□□□□ -1.76
DDX42-210ENST00000579539 INTS1Q8N201 2190 aaKnown RBP4.08□□□□□ -1.76
DDX42-210ENST00000579539 Q8N814 137 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 LINC00467Q9BRT7 94 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 CEP350Q5VT06 3117 aa4.08□□□□□ -1.76
DDX42-210ENST00000579539 LECT2O14960 151 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 LY6G6DO95868 133 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 IGHV3-23P01764 117 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 FUSP35637 526 aaKnown RBP eCLIP4.07□□□□□ -1.76
DDX42-210ENST00000579539 NBL1P41271 181 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 C9orf66Q5T8R8 295 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 FAM74A4Q5TZK3 123 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 Q8N9W7 124 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 CHCHD7Q9BUK0 85 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 S4R3C0 116 aa4.07□□□□□ -1.76
DDX42-210ENST00000579539 A0A087WYN8 130 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 IGHV3-35A0A0C4DH35 117 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 TRBV7-4A0A0J9YYF1 115 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 TRBV10-1A0A0K0K1A3 114 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 NCR3O14931 201 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 IGHV3-53P01767 116 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 ZNF580Q9UK33 172 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 FREM1Q5H8C1 2179 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 PI4KAP42356 2102 aa4.06□□□□□ -1.76
DDX42-210ENST00000579539 SDK2Q58EX2 2172 aa4.05□□□□□ -1.76
DDX42-210ENST00000579539 IGHV3-66A0A0C4DH42 116 aa4.05□□□□□ -1.76
DDX42-210ENST00000579539 DAD1P61803 113 aa4.05□□□□□ -1.76
DDX42-210ENST00000579539 C6orf223Q8N319 242 aa4.05□□□□□ -1.76
DDX42-210ENST00000579539 DSCAML1Q8TD84 2053 aa4.05□□□□□ -1.76
DDX42-210ENST00000579539 IGKV2-28A0A075B6P5 120 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
DDX42-210ENST00000579539 NDUFB1O75438 58 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 IGKV2D-28P01615 120 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 PRB4P10163 310 aaPredicted RBP4.04□□□□□ -1.76
DDX42-210ENST00000579539 LINC00158P58513 81 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 HILS1P60008 231 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 NDPQ00604 133 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 COX17Q14061 63 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 DEFB114Q30KQ6 69 aa4.04□□□□□ -1.76
DDX42-210ENST00000579539 IGFL3Q6UXB1 125 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms