RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 HIGD2BQ4VC39 106 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 ERC2-IT1O76042 136 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 BPESC1Q9GZL8 116 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 B4DSR2 109 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 ZFP36P26651 326 aaKnown RBP4.54□□□□□ -1.68
PTPRD-214ENST00000540109 TRBV27A0A0K0K1C4 114 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 SMCPP49901 116 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-214ENST00000540109 PRUNE2Q8WUY3 3088 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 DEFB121Q5J5C9 76 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 RMI2Q96E14 147 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 RHPN1-AS1Q9BWJ2 59 aa4.54□□□□□ -1.68
PTPRD-214ENST00000540109 ZNF561-AS1K7EIQ3 104 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 MIFP14174 115 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 XCL1P47992 114 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 CDSNQ15517 529 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 LINC00336Q6ZUF6 198 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 TMEM263Q8WUH6 116 aaKnown RBP4.53□□□□□ -1.68
PTPRD-214ENST00000540109 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 ANKRD11Q6UB99 2663 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-214ENST00000540109 A0A087WZ39 114 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 A8MZ25 164 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 APRG1Q8IVJ8 170 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 AKAP6Q13023 2319 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 IGF1P05019 195 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 HHLA3Q9XRX5 114 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 TRGV1A0A0A0MS02 117 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 TRBV7-6A0A0J9YX20 115 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 C5orf56Q8N8D9 126 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 PLAC8L1A1L4L8 177 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 CD164Q04900 197 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 POM121L12Q8N7R1 296 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
PTPRD-214ENST00000540109 LINC01548A6NM66 108 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 MSMBP08118 114 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 COX6B1P14854 86 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 CTSGP08311 255 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 DOPEY2Q9Y3R5 2298 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 BPY2O14599 106 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 H3BPC8 53 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 IGHV7-4-1A0A0J9YVY3 117 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 LY6HO94772 140 aa4.52□□□□□ -1.69
PTPRD-214ENST00000540109 SPTBN1Q01082 2364 aaKnown RBP4.52□□□□□ -1.69
PTPRD-214ENST00000540109 MALRD1Q5VYJ5 2156 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 ATP6V0E1O15342 81 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-214ENST00000540109 RPL28P46779 137 aaKnown RBP4.51□□□□□ -1.69
PTPRD-214ENST00000540109 APOC4P55056 127 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 PRO0461Q9UI25 63 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 K7ERS5 55 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 CRYGDP07320 174 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 SPINK13Q1W4C9 94 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 SPTBN2O15020 2390 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 ABCA4P78363 2273 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 CCKP06307 115 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 DIRC1Q969H9 104 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 DNAH14Q0VDD8 3507 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 A6NDX4 124 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 IGLV2-11P01706 119 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 ESRGQ1W209 222 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 ABCA1O95477 2261 aa4.51□□□□□ -1.69
PTPRD-214ENST00000540109 TLN1Q9Y490 2541 aaKnown RBP4.5□□□□□ -1.69
PTPRD-214ENST00000540109 A0A1W2PPR1 153 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 PRAC2D3DTV9 90 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 CCL24O00175 119 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 Q6ZSV7 163 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-214ENST00000540109 C19orf84I3L1E1 186 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 ZFAND3Q9H8U3 227 aa4.5□□□□□ -1.69
PTPRD-214ENST00000540109 F8W735 103 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-214ENST00000540109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-214ENST00000540109 TNCP24821 2201 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 COX17Q14061 63 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 HILS1P60008 231 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 SORL1Q92673 2214 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 IGHV4-61A0A0C4DH41 118 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 HTN3P15516 51 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 FHL3Q13643 280 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 CASC2Q6XLA1 102 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 RNF185Q96GF1 192 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 CYP4F30PQ9H0H9 118 aa4.49□□□□□ -1.69
PTPRD-214ENST00000540109 PIP4P2Q8N4L2 257 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 CRIP1P50238 77 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 CFHR3Q02985 330 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 CLPSL2Q6UWE3 100 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 SPTA1P02549 2419 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 hDV103S1A0JD37 113 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 EYSQ5T1H1 3165 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
PTPRD-214ENST00000540109 Q96MF0 132 aa4.48□□□□□ -1.69
PTPRD-214ENST00000540109 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms