RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 K7EMT4 169 aa8.45□□□□□ -1.06
SEC61A1-205ENST00000483956 EDN2P20800 178 aa8.45□□□□□ -1.06
SEC61A1-205ENST00000483956 Q8N2B8 174 aa8.45□□□□□ -1.06
SEC61A1-205ENST00000483956 UTP20O75691 2785 aaKnown RBP8.45□□□□□ -1.06
SEC61A1-205ENST00000483956 IGHV3-16A0A0C4DH30 117 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 M0QY20 66 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 MYO18BQ8IUG5 2567 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 ABCA2Q9BZC7 2435 aa8.44□□□□□ -1.06
SEC61A1-205ENST00000483956 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 IGHV1-58A0A0C4DH39 117 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 CRYBG3Q68DQ2 2970 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 RNASE13Q5GAN3 156 aaKnown RBP8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 SPG11Q96JI7 2443 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 A6NDX4 124 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 BRD3OSQ6XYD6 125 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 Q9HAA7 133 aa8.43□□□□□ -1.06
SEC61A1-205ENST00000483956 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM208BQ5VWN6 2430 aa8.42□□□□□ -1.06
SEC61A1-205ENST00000483956 DNAL4O96015 105 aa8.42□□□□□ -1.06
SEC61A1-205ENST00000483956 SEC61GP60059 68 aa8.42□□□□□ -1.06
SEC61A1-205ENST00000483956 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
SEC61A1-205ENST00000483956 CFHR3Q02985 330 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 Q6JHZ5 121 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 VSIG2Q96IQ7 327 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 PRORYQ9H606 182 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 A0A0U1RRA0 63 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 WFDC11Q8NEX6 87 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM222AQ5U5X8 452 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 C14orf132Q9NPU4 83 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 LY6EQ16553 131 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 PRIMA1Q86XR5 153 aa8.4□□□□□ -1.06
SEC61A1-205ENST00000483956 H3BUX3 64 aa8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 CD28P10747 220 aa8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 FLNCQ14315 2725 aa8.4□□□□□ -1.07
SEC61A1-205ENST00000483956 AVPP01185 164 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 HILS1P60008 231 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 NDUFC2O95298 119 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 BLCAPP62952 87 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
SEC61A1-205ENST00000483956 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
SEC61A1-205ENST00000483956 C20orf197Q8N268 126 aa8.38□□□□□ -1.07
SEC61A1-205ENST00000483956 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
SEC61A1-205ENST00000483956 IGSF10Q6WRI0 2623 aa8.38□□□□□ -1.07
SEC61A1-205ENST00000483956 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 TRAV12-2A0A075B6T6 113 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 GHRHP01286 108 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 SNRPD3P62318 126 aaKnown RBP8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 ZNF625Q96I27 306 aaPredicted RBP8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 TIMM17BO60830 172 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
SEC61A1-205ENST00000483956 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 K7EQG2 157 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 V9GYY9 64 aa8.36□□□□□ -1.07
SEC61A1-205ENST00000483956 USP24Q9UPU5 2620 aa8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 PSMB8P28062 276 aa8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 WFDC9Q8NEX5 89 aa8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 TRAV23DV6A0A075B6W5 121 aa8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1BA6NDE4 496 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1EA6NEQ0 496 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1DP0C7P1 496 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1A1P0DJD3 496 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1CP0DJD4 496 aa8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 RBMY1FQ15415 496 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 XCL1P47992 114 aa8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 SPINK13Q1W4C9 94 aa8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
SEC61A1-205ENST00000483956 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 TMEM89A2RUT3 159 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 IGKV3-20P01619 116 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 ZNF462Q96JM2 2506 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 LRRK2Q5S007 2527 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 NDUFA1O15239 70 aa8.33□□□□□ -1.08
SEC61A1-205ENST00000483956 C1orf195Q5TG92 126 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 CELSR1Q9NYQ6 3014 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 C19orf84I3L1E1 186 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms