RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 UBE2L6O14933 153 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 MSMPQ1L6U9 139 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 RUSC1-AS1Q66K80 236 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 FAM19A1Q7Z5A9 133 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 Q8NA96 180 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 DPM3Q9P2X0 92 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 LINC00474Q9P2X8 69 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 IGLV2-23P01705 113 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 PRB2P02812 416 aaPredicted RBP5.69□□□□□ -1.5
VTI1A-201ENST00000393077 CGB3P0DN86 165 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 CGB7P0DN87 165 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 MIFP14174 115 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 MGAQ8IWI9 3026 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 COL4A2P08572 1712 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 IGLV3-9A0A075B6K5 115 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 OXTP01178 125 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 ADAMTSL4-AS1Q5T5F5 129 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 C22orf34Q6ZV56 151 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 CCL19Q99731 98 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 SND1-IT1Q9HBX3 110 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 CDSNQ15517 529 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 RNF5Q99942 180 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 C11orf21Q9P2W6 132 aa5.69□□□□□ -1.5
VTI1A-201ENST00000393077 LY6EQ16553 131 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 IGHV7-4-1A0A0J9YVY3 117 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 PF4P02776 101 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 LINC00482Q8N8I6 264 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 PKD1L2Q7Z442 2459 aa5.68□□□□□ -1.5
VTI1A-201ENST00000393077 SLPIP03973 132 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 SAA4P35542 130 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 ZNF580Q9UK33 172 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 MRPL53Q96EL3 112 aaKnown RBP5.67□□□□□ -1.5
VTI1A-201ENST00000393077 SPTBN5Q9NRC6 3674 aaKnown RBP5.67□□□□□ -1.5
VTI1A-201ENST00000393077 WDFY3Q8IZQ1 3526 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 POLQO75417 2590 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 STHQ8IWL8 128 aa5.67□□□□□ -1.5
VTI1A-201ENST00000393077 DSCAMO60469 2012 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 IGHV4-4A0A075B6R2 117 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 PLAC8L1A1L4L8 177 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 ESRGQ1W209 222 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 FASNP49327 2511 aaKnown RBP5.66□□□□□ -1.5
VTI1A-201ENST00000393077 WNK1Q9H4A3 2382 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
VTI1A-201ENST00000393077 C9orf47Q6ZRZ4 202 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 COX8CQ7Z4L0 72 aa5.66□□□□□ -1.5
VTI1A-201ENST00000393077 ZNF292O60281 2723 aa5.65□□□□□ -1.5
VTI1A-201ENST00000393077 TSHBP01222 138 aa5.65□□□□□ -1.5
VTI1A-201ENST00000393077 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
VTI1A-201ENST00000393077 ZNF462Q96JM2 2506 aa5.65□□□□□ -1.5
VTI1A-201ENST00000393077 MYO15AQ9UKN7 3530 aa5.65□□□□□ -1.5
VTI1A-201ENST00000393077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.5
VTI1A-201ENST00000393077 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.5
VTI1A-201ENST00000393077 PSPHP1O15172 72 aa5.65□□□□□ -1.5
VTI1A-201ENST00000393077 A0A087WZ39 114 aa5.65□□□□□ -1.51
VTI1A-201ENST00000393077 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.51
VTI1A-201ENST00000393077 VMO1Q7Z5L0 202 aa5.65□□□□□ -1.51
VTI1A-201ENST00000393077 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.51
VTI1A-201ENST00000393077 BPESC1Q9GZL8 116 aa5.65□□□□□ -1.51
VTI1A-201ENST00000393077 MED14OSP0DP75 135 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 C4orf48Q5BLP8 95 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 LINC01600Q96MT4 127 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 LYRM9A8MSI8 78 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 CTSGP08311 255 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 KLK9Q9UKQ9 250 aa5.64□□□□□ -1.51
VTI1A-201ENST00000393077 IGHV4OR15-8A0A075B7B6 117 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 A0A087WW49 117 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 IGHV3-38A0A0C4DH36 116 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 NDUFA1O15239 70 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 LHBP01229 141 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 APRG1Q8IVJ8 170 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 H7BZZ5 65 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 BRD3OSQ6XYD6 125 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 ABCA12Q86UK0 2595 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 ADORA2A-AS1P86434 159 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 PSMG3-AS1Q96PY0 264 aa5.63□□□□□ -1.51
VTI1A-201ENST00000393077 UBE2BP63146 152 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 Q96MF0 132 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 FREM2Q5SZK8 3169 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 IGLV11-55A0A075B6I3 123 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 COX7B2Q8TF08 81 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 SMAD5-AS1Q9Y6J3 95 aa5.62□□□□□ -1.51
VTI1A-201ENST00000393077 EIF4EBP3O60516 100 aaPredicted RBP5.61□□□□□ -1.51
VTI1A-201ENST00000393077 IGF1P05019 195 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 GPHB5Q86YW7 130 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 MAPK1IP1LQ8NDC0 245 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 AMELXQ99217 191 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 OVOL3O00110 214 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 NREPQ16612 68 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 JMJD1CQ15652 2540 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 LY6LH3BQJ8 138 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 TMEM254Q8TBM7 123 aa5.61□□□□□ -1.51
VTI1A-201ENST00000393077 CENPEQ02224 2701 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms