RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 LINC00574Q9H8X3 128 aa1.96□□□□□ -2.1
TRAV41-201ENST00000390468 ZNRD1Q9P1U0 126 aa1.96□□□□□ -2.1
TRAV41-201ENST00000390468 XCL2Q9UBD3 114 aa1.96□□□□□ -2.1
TRAV41-201ENST00000390468 WNK1Q9H4A3 2382 aa1.96□□□□□ -2.1
TRAV41-201ENST00000390468 ADGRG4Q8IZF6 3080 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 PTPN13Q12923 2485 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV4-30-2A0A087WSY4 118 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV3-72A0A0B4J1Y9 119 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TRAV13-2A0A0B4J235 113 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV1-69DA0A0B4J2H0 117 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV1-3A0A0C4DH29 117 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV4-61A0A0C4DH41 118 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 A0A0J9YX75 114 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TRBV10-3A0A0K0K1G6 114 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 ODF3BA8MYP8 253 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 LEPROTO15243 131 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 IGLV1-47P01700 117 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 MSMBP08118 114 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 SAA1P0DJI8 122 aaPredicted RBP1.95□□□□□ -2.1
TRAV41-201ENST00000390468 PROK1P58294 105 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 LINC00205P59089 165 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 BLCAPP62952 87 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 PRCDQ00LT1 54 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 PRB3Q04118 309 aaPredicted RBP1.95□□□□□ -2.1
TRAV41-201ENST00000390468 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 ESRGQ1W209 222 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 DEFB113Q30KQ7 82 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 NSUN5P1Q3KNT7 163 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 MINOS1Q5TGZ0 78 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 MORN5Q5VZ52 161 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
TRAV41-201ENST00000390468 FAM223AQ8IWN6 122 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 LYPD1Q8N2G4 141 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 SMCR5Q8TEV8 140 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 DCANP1Q8TF63 244 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TOMM6Q96B49 74 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TMEM141Q96I45 108 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 FAM167A-AS1Q96KT0 104 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 C17orf77Q96MU5 243 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 TMEM14CQ9P0S9 112 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 DPM3Q9P2X0 92 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 MINOS1-NBL1R4GNA1 71 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 LRRK2Q5S007 2527 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 SVEP1Q4LDE5 3571 aa1.95□□□□□ -2.1
TRAV41-201ENST00000390468 DCHS2Q6V1P9 2916 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 FLNCQ14315 2725 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 TRBV27A0A0K0K1C4 114 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 FAM223BA6NKX1 122 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 B4DSR2 109 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 F8WEM9 126 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 SMKR1H3BMG3 65 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 H7BZZ5 65 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 SOCS3O14543 225 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 COX7A2LO14548 114 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 PROP1O75360 226 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 IGKV1-16P04430 117 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 UBE2E1P51965 193 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 BRWD1-AS2P59051 145 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 KRTAP10-6P60371 365 aaPredicted RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 LMO4P61968 165 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 SS18Q15532 418 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 LINC00322Q6ZN03 302 aaPredicted RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 Q6ZVQ6 151 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 Q8N9P0 234 aaPredicted RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 MPLKIPQ8TAP9 179 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 UBE2E2Q96LR5 201 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 RNF5Q99942 180 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 SMIM2Q9BVW6 85 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 TMEM14BQ9NUH8 114 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 RBM12B-AS1Q9P1G2 102 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 CFAP46Q8IYW2 2715 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 CSMD1Q96PZ7 3565 aa1.94□□□□□ -2.1
TRAV41-201ENST00000390468 USP9YO00507 2555 aaPredicted RBP1.94□□□□□ -2.1
TRAV41-201ENST00000390468 UBR5O95071 2799 aaPredicted RBP1.93□□□□□ -2.1
TRAV41-201ENST00000390468 ANK3Q12955 4377 aaKnown RBP1.93□□□□□ -2.1
TRAV41-201ENST00000390468 NAV2Q8IVL1 2488 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV3OR16-10A0A075B7F0 116 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGKV3D-7A0A0C4DH55 119 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 I3L3M4 83 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 SH2D1AO60880 128 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGLV2-23P01705 113 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV1-69P01742 117 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGKV2-30P06310 120 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 PRSS2P07478 247 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 BAALC-AS2P0C853 105 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 IGHV4-38-2P0DP08 117 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 FUSP35637 526 aaKnown RBP eCLIP1.93□□□□□ -2.1
TRAV41-201ENST00000390468 UBE2AP49459 152 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 PDE6HQ13956 83 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 MIAQ16674 131 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 RUSC1-AS1Q66K80 236 aa1.93□□□□□ -2.1
TRAV41-201ENST00000390468 HIST2H2BCQ6DN03 193 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms