RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 SLPIP03973 132 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 MINOS1Q5TGZ0 78 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 DCANP1Q8TF63 244 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 AMELXQ99217 191 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 DEFB121Q5J5C9 76 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 E7EQL1 145 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
USP6NL-202ENST00000379237 C22orf34Q6ZV56 151 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
USP6NL-202ENST00000379237 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 M0QY20 66 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 SMIM26A0A096LP01 95 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 H0YGX0 51 aa8.12□□□□□ -1.11
USP6NL-202ENST00000379237 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 CCL19Q99731 98 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 TLN1Q9Y490 2541 aaKnown RBP8.11□□□□□ -1.11
USP6NL-202ENST00000379237 HILS1P60008 231 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 SEM1Q6ZVN7 128 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 CCDC140Q96MF4 163 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 FAM215AQ9Y5M1 114 aa8.11□□□□□ -1.11
USP6NL-202ENST00000379237 TIMM17BO60830 172 aa8.1□□□□□ -1.11
USP6NL-202ENST00000379237 TMEM86BQ8N661 226 aa8.1□□□□□ -1.11
USP6NL-202ENST00000379237 RAI1Q7Z5J4 1906 aaPredicted RBP8.1□□□□□ -1.11
USP6NL-202ENST00000379237 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
USP6NL-202ENST00000379237 XCL1P47992 114 aa8.1□□□□□ -1.11
USP6NL-202ENST00000379237 XCL2Q9UBD3 114 aa8.1□□□□□ -1.11
USP6NL-202ENST00000379237 NDUFA1O15239 70 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 UNQ9165/PRO28630Q6UXU0 137 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 MINOS1-NBL1R4GNA1 71 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 TECTAO75443 2155 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 NBL1P41271 181 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
USP6NL-202ENST00000379237 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.11
USP6NL-202ENST00000379237 CEP295Q9C0D2 2601 aa8.09□□□□□ -1.12
USP6NL-202ENST00000379237 FHL2Q14192 279 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 Q8N9W7 124 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 PRORYQ9H606 182 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 NDUFA4O00483 81 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 Q8N2B8 174 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 C2orf48Q96LS8 159 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 F8WEM9 126 aa8.08□□□□□ -1.12
USP6NL-202ENST00000379237 HTN3P15516 51 aa8.07□□□□□ -1.12
USP6NL-202ENST00000379237 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
USP6NL-202ENST00000379237 IGHV3-53P01767 116 aa8.07□□□□□ -1.12
USP6NL-202ENST00000379237 SAA4P35542 130 aa8.07□□□□□ -1.12
USP6NL-202ENST00000379237 CYSTM1Q9H1C7 97 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 ZNF575Q86XF7 245 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 C6orf226Q5I0X4 101 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 SOSTDC1Q6X4U4 206 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 NAV2Q8IVL1 2488 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 PROK1P58294 105 aa8.06□□□□□ -1.12
USP6NL-202ENST00000379237 HIVEP3Q5T1R4 2406 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 F8WDY8 70 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 LY6LH3BQJ8 138 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 EDN2P20800 178 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
USP6NL-202ENST00000379237 RNF223E7ERA6 249 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 ATP5EP2Q5VTU8 51 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 LITAFQ99732 161 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 FAM218AQ96MZ4 157 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 TLN2Q9Y4G6 2542 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 A0A087WYN8 130 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
USP6NL-202ENST00000379237 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-202ENST00000379237 DAD1P61803 113 aa8.03□□□□□ -1.12
USP6NL-202ENST00000379237 LINC00315P59091 139 aa8.03□□□□□ -1.12
USP6NL-202ENST00000379237 BLCAPP62952 87 aa8.03□□□□□ -1.12
USP6NL-202ENST00000379237 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
USP6NL-202ENST00000379237 ITLN2Q8WWU7 325 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-202ENST00000379237 U3KQE9 123 aa8.02□□□□□ -1.12
USP6NL-202ENST00000379237 CHD8Q9HCK8 2581 aa8.02□□□□□ -1.12
USP6NL-202ENST00000379237 RMI2Q96E14 147 aa8.02□□□□□ -1.13
USP6NL-202ENST00000379237 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
USP6NL-202ENST00000379237 SETD2Q9BYW2 2564 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-202ENST00000379237 TRGV1A0A0A0MS02 117 aa8.02□□□□□ -1.13
USP6NL-202ENST00000379237 Q5XG85 94 aa8.02□□□□□ -1.13
USP6NL-202ENST00000379237 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
USP6NL-202ENST00000379237 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 USMG5Q96IX5 58 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 GNLYP22749 145 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 BRD3OSQ6XYD6 125 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
USP6NL-202ENST00000379237 TRAV7A0A075B6U4 112 aa8□□□□□ -1.13
USP6NL-202ENST00000379237 C11orf44Q8N8P7 122 aa8□□□□□ -1.13
USP6NL-202ENST00000379237 OXTP01178 125 aa8□□□□□ -1.13
USP6NL-202ENST00000379237 SCXQ7RTU7 201 aa8□□□□□ -1.13
USP6NL-202ENST00000379237 JMJD1CQ15652 2540 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 TRBV7-6A0A0J9YX20 115 aa7.99□□□□□ -1.13
USP6NL-202ENST00000379237 TMEM256-PLSCR3K7ERE1 68 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms