RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	FMP30	Q02883	468 aa		3.4	□□□□□ -1.87
HAA1	YPR008W	FDC1	Q03034	503 aa		3.4	□□□□□ -1.87
HAA1	YPR008W	ULA1	Q12059	462 aa		3.4	□□□□□ -1.87
HAA1	YPR008W	HOM2	P13663	365 aa	Known RBP	3.39	□□□□□ -1.87
HAA1	YPR008W	PPE1	P38796	400 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	EFR3	Q03653	782 aa	Known RBP	3.39	□□□□□ -1.87
HAA1	YPR008W	ADE5,7	P07244	802 aa	Known RBP	3.39	□□□□□ -1.87
HAA1	YPR008W	HXT4	P32467	576 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	TAX4	P47030	604 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	PIP2	P52960	996 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	YIP4	P53093	235 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	NGL2	Q03264	515 aa	Known RBP	3.39	□□□□□ -1.87
HAA1	YPR008W	NSE5	Q03718	556 aa		3.39	□□□□□ -1.87
HAA1	YPR008W	FAP7	Q12055	197 aa	Predicted RBP	3.39	□□□□□ -1.87
HAA1	YPR008W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.38	□□□□□ -1.87
HAA1	YPR008W	ERG11	P10614	530 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	DID4	P36108	232 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	YHR033W	P38690	423 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	ARR3	Q06598	404 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	YML133C	Q03099	1374 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	YLL067C	Q07888	1374 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	YLL066C	Q99208	1374 aa		3.38	□□□□□ -1.87
HAA1	YPR008W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
HAA1	YPR008W	AAD3	P25612	363 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	RMA1	P36001	430 aa	Known RBP	3.37	□□□□□ -1.87
HAA1	YPR008W	PTA1	Q01329	785 aa	Predicted RBP	3.37	□□□□□ -1.87
HAA1	YPR008W	RIM13	Q03792	727 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	PPN1	Q04119	674 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	PSK1	P31374	1356 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	ORC2	P32833	620 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	FPR3	P38911	411 aa	Known RBP	3.37	□□□□□ -1.87
HAA1	YPR008W	YNL018C	P53976	612 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	RPS15	Q01855	142 aa	Known RBP	3.37	□□□□□ -1.87
HAA1	YPR008W	YCG1	Q06680	1035 aa		3.37	□□□□□ -1.87
HAA1	YPR008W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
HAA1	YPR008W	CNE1	P27825	502 aa		3.36	□□□□□ -1.87
HAA1	YPR008W	GPP2	P40106	250 aa	Known RBP	3.36	□□□□□ -1.87
HAA1	YPR008W	HLR1	Q04429	423 aa		3.36	□□□□□ -1.87
HAA1	YPR008W	NGL1	Q08213	363 aa	Known RBP	3.36	□□□□□ -1.87
HAA1	YPR008W	HMG2	P12684	1045 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	UBP12	P39538	1254 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	BUD17	P53727	317 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	CPR8	P53728	308 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	MFM1	Q02783	413 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	HOF1	Q05080	669 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	SLK19	Q08581	821 aa	Known RBP	3.35	□□□□□ -1.87
HAA1	YPR008W	AI5_ALPHA	Q9ZZX1	630 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	USO1	P25386	1790 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	YEF3	P16521	1044 aa	Known RBP	3.35	□□□□□ -1.87
HAA1	YPR008W	NUP1	P20676	1076 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	MBR1	P23493	339 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	YPT10	P38146	199 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	LRO1	P40345	661 aa		3.35	□□□□□ -1.87
HAA1	YPR008W	DAK1	P54838	584 aa	Known RBP	3.35	□□□□□ -1.87
HAA1	YPR008W	PMA2	P19657	947 aa		3.34	□□□□□ -1.87
HAA1	YPR008W	HOP1	P20050	605 aa		3.34	□□□□□ -1.87
HAA1	YPR008W	EUG1	P32474	517 aa		3.34	□□□□□ -1.87
HAA1	YPR008W	FRE7	Q12333	620 aa		3.34	□□□□□ -1.87
HAA1	YPR008W	ZPS1	Q12512	249 aa		3.34	□□□□□ -1.87
HAA1	YPR008W	ADE6	P38972	1358 aa	Known RBP	3.34	□□□□□ -1.87
HAA1	YPR008W	PRS1	P32895	427 aa	Known RBP	3.34	□□□□□ -1.88
HAA1	YPR008W	TAP42	Q04372	366 aa		3.34	□□□□□ -1.88
HAA1	YPR008W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.88	not detected
HAA1	YPR008W	AFT2	Q08957	416 aa		3.34	□□□□□ -1.88
HAA1	YPR008W	CPA2	P03965	1118 aa	Known RBP	3.33	□□□□□ -1.88
HAA1	YPR008W	DGR2	P32330	852 aa		3.33	□□□□□ -1.88
HAA1	YPR008W	HOT13	P36078	116 aa		3.33	□□□□□ -1.88
HAA1	YPR008W	IRC5	P43610	853 aa		3.33	□□□□□ -1.88
HAA1	YPR008W	IOC4	Q04213	475 aa		3.33	□□□□□ -1.88
HAA1	YPR008W	SEG1	Q04279	960 aa		3.33	□□□□□ -1.88
HAA1	YPR008W	MLP1	Q02455	1875 aa	Known RBP	3.33	□□□□□ -1.88
HAA1	YPR008W	PGK1	P00560	416 aa	Known RBP	3.32	□□□□□ -1.88
HAA1	YPR008W	APN1	P22936	367 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YEL025C	P39991	1188 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	EAF5	P39995	279 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YEN1	P40028	759 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	BNA3	P47039	444 aa	Known RBP	3.32	□□□□□ -1.88
HAA1	YPR008W	YJR120W	P47157	116 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	DOS2	P54858	310 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	USA1	Q03714	838 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YPR027C	Q12079	277 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	RPL7A	P05737	244 aa	Known RBP	3.32	□□□□□ -1.88
HAA1	YPR008W	AQY1	P0CD91	305 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YEL076C-A	P0CX16	216 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YLR464W	P0CX17	216 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	GRX4	P32642	244 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	RIM4	P38741	713 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	YEL076C	P39971	216 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	SNM1	P40993	198 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	THI6	P41835	540 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	NIT2	P47016	307 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	SAP4	P53036	818 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	COQ6	P53318	479 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	RPL7B	Q12213	244 aa	Known RBP	3.32	□□□□□ -1.88
HAA1	YPR008W	AUS1	Q08409	1394 aa		3.32	□□□□□ -1.88
HAA1	YPR008W	RPS24A	P0CX31	135 aa	Known RBP	3.31	□□□□□ -1.88
HAA1	YPR008W	RPS24B	P0CX32	135 aa	Known RBP	3.31	□□□□□ -1.88
HAA1	YPR008W	XBP1	P40489	647 aa		3.31	□□□□□ -1.88
HAA1	YPR008W	YFL015C	P43578	164 aa		3.31	□□□□□ -1.88
HAA1	YPR008W	DUG1	P43616	481 aa	Known RBP	3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms