RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS27	YNR006W	PET127	P32606	800 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	POL31	P46957	487 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	INP52	P50942	1183 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	HOT1	Q03213	719 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	PKH1	Q03407	766 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	ROT1	Q03691	256 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	VPS36	Q06696	566 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	WHI4	Q07655	649 aa	Known RBP	4.17	□□□□□ -1.74
VPS27	YNR006W	TPO1	Q07824	586 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	ENT4	Q07872	247 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	CUE5	Q08412	411 aa	Known RBP	4.17	□□□□□ -1.74
VPS27	YNR006W	HOS1	Q12214	470 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	GRX6	Q12438	231 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	YBR126W-A	Q8TGU7	68 aa		4.17	□□□□□ -1.74
VPS27	YNR006W	TPK1	P06244	397 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	SES1	P07284	462 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	PCK1	P10963	549 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	PYC1	P11154	1178 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	LCB1	P25045	558 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	ADK2	P26364	225 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	PRE4	P30657	266 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	GPI10	P30777	616 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	LIP5	P32875	414 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	CDS1	P38221	457 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	UBP7	P40453	1071 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	CAB2	P40506	365 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	GSM1	P42950	618 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	YDL183C	P48569	320 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	PSP2	P50109	593 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	SGF73	P53165	657 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	ORC4	P54791	529 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	RPT6	Q01939	405 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	YML119W	Q03208	357 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	PRP42	Q03776	544 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	GRX3	Q03835	250 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	CTI6	Q08923	506 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	NMD4	Q12129	218 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	GET3	Q12154	354 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	ISA2	Q12425	185 aa		4.16	□□□□□ -1.74
VPS27	YNR006W	PAR32	Q12515	295 aa	Known RBP	4.16	□□□□□ -1.74
VPS27	YNR006W	SEC53	P07283	254 aa	Known RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	CDC24	P11433	854 aa	Predicted RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	HMG2	P12684	1045 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	APE1	P14904	514 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	KAR3	P17119	729 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	YCK1	P23291	538 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	MNE1	P24720	663 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	RRP7	P25368	297 aa	Predicted RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	SEC21	P32074	935 aa	Known RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	MDL1	P33310	695 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	SAK1	P38990	1142 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	MTR3	P48240	250 aa	Predicted RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	GCV2	P49095	1034 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	COG1	P53079	417 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	GTF1	P53260	183 aa	Predicted RBP	4.15	□□□□□ -1.74
VPS27	YNR006W	SNO2	P53823	222 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	YNL058C	P53947	316 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	VPS9	P54787	451 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	ADY4	Q05955	493 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	SUL2	Q12325	893 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	YOR111W	Q99210	232 aa		4.15	□□□□□ -1.74
VPS27	YNR006W	CDC6	P09119	513 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	ATG19	P35193	415 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	YHR078W	P38799	552 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	FLC2	P39719	783 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	YNL195C	P40168	261 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	SDP1	P40479	209 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	URM1	P40554	99 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS27	YNR006W	PFA3	P42836	336 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	MET12	P46151	657 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	TAH11	P47112	604 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	NNF2	P53253	936 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	YNR061C	P53747	219 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	CSL4	P53859	292 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS27	YNR006W	HMO1	Q03973	246 aa	Known RBP	4.15	□□□□□ -1.75
VPS27	YNR006W	RAD30	Q04049	632 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	MUS81	Q04149	632 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS27	YNR006W	RCO1	Q04779	684 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	YDR341C	Q05506	607 aa	Known RBP	4.15	□□□□□ -1.75
VPS27	YNR006W	VAM6	Q07468	1049 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	HUA2	Q12134	243 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	DFG16	Q99234	619 aa		4.15	□□□□□ -1.75
VPS27	YNR006W	INO80	P53115	1489 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	YLR302C	O13544	120 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	TY2A-LR1	P0C2J4	438 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	TY2A-F	P0CX61	438 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	TY2A-GR2	P0CX62	438 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	ADE2	P21264	571 aa	Known RBP	4.14	□□□□□ -1.75
VPS27	YNR006W	STE50	P25344	346 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	TY2A-C	P25383	438 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	CAP1	P28495	268 aa	Known RBP	4.14	□□□□□ -1.75
VPS27	YNR006W	EFT1	P32324	842 aa	Known RBP	4.14	□□□□□ -1.75
VPS27	YNR006W	GCS1	P35197	352 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	OMA1	P36163	345 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	POL12	P38121	705 aa	Predicted RBP	4.14	□□□□□ -1.75
VPS27	YNR006W	SRO77	P38163	1010 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	YEL057C	P39983	233 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	SEC28	P40509	296 aa	Known RBP	4.14	□□□□□ -1.75
VPS27	YNR006W	LCB2	P40970	561 aa		4.14	□□□□□ -1.75
VPS27	YNR006W	MDE1	P47095	244 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms