RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	VPS41	P38959	992 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	GAA1	P39012	614 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	HUL4	P40985	892 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	MIC19	P43594	170 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	TOS3	P43637	560 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	CCM1	P48237	864 aa	Predicted RBP	3.87	□□□□□ -1.79
RIM11	YMR139W	GYL1	Q04322	720 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	AIM33	Q04516	312 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	SOV1	Q04748	898 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	YLH47	Q06493	454 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	PCL8	Q08966	492 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	RMP1	Q12530	201 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	SMC6	Q12749	1114 aa		3.87	□□□□□ -1.79
RIM11	YMR139W	TOP1	P04786	769 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	FBP1	P09201	348 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	SSB1	P11484	613 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	RPL8A	P17076	256 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	SAM2	P19358	384 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	CLB1	P24868	471 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	DEP1	P31385	405 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	ECM32	P32644	1121 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	YKU70	P32807	602 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	NFU1	P32860	256 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	XRS2	P33301	854 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	MUD2	P36084	527 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	YKR078W	P36158	585 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	SMC2	P38989	1170 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	SAP1	P39955	897 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	SSB2	P40150	613 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	GAT1	P43574	510 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	CTK3	P46963	296 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	TAD1	P53065	400 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	MFM1	Q02783	413 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	BUL2	Q03758	920 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	POB3	Q04636	552 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	SUE1	Q06524	206 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	OPY2	Q06810	360 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	YDL124W	Q07551	312 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	NOP6	Q07623	225 aa	Known RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	TCO89	Q08921	799 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	PLP2	Q12017	286 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	NUR1	Q12066	484 aa		3.86	□□□□□ -1.79
RIM11	YMR139W	RRG1	Q12167	365 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM11	YMR139W	ILV1	P00927	576 aa	Known RBP	3.85	□□□□□ -1.79
RIM11	YMR139W	DMC1	P25453	334 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	CST26	P38226	397 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	YBR053C	P38235	358 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	GDT1	P38301	280 aa	Predicted RBP	3.85	□□□□□ -1.79
RIM11	YMR139W	SIP3	P38717	1229 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	PIH1	P38768	344 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	SET5	P38890	526 aa	Known RBP	3.85	□□□□□ -1.79
RIM11	YMR139W	NUP82	P40368	713 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	MAD1	P40957	749 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	LSB1	P53281	241 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	PGA2	P53903	129 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	APM1	Q00776	475 aa	Predicted RBP	3.85	□□□□□ -1.79
RIM11	YMR139W	VTC3	Q02725	835 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	YPR078C	Q06813	372 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	YDL057W	Q07379	328 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	DAS2	Q12084	232 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	RUD3	Q12234	484 aa	Known RBP	3.85	□□□□□ -1.79
RIM11	YMR139W	YOL087C	Q99247	1116 aa		3.85	□□□□□ -1.79
RIM11	YMR139W	RIF1	P29539	1916 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	CDC8	P00572	216 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	RAD1	P06777	1100 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	RFA1	P22336	621 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	CDC60	P26637	1090 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	ICL1	P28240	557 aa	Predicted RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	NIP100	P33420	868 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	JNM1	P36224	373 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	PAM1	P37304	830 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	YBL028C	P38202	106 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	TDA3	P38758	523 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	NDT80	P38830	627 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	CTF8	P38877	133 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	YMR124W	P39523	943 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	AMA1	P50082	593 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	NBP1	P52919	319 aa	Predicted RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	SNU71	P53207	620 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	DAM1	P53267	343 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	BTN2	P53286	410 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	CWC22	P53333	577 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	TOF1	P53840	1238 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	YMR102C	Q03177	834 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	URH1	Q04179	340 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	VTI1	Q04338	217 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	YMR114C	Q04471	368 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	FUS2	Q05670	677 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	SFH1	Q06168	426 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	MRI1	Q06489	411 aa	Known RBP	3.84	□□□□□ -1.79
RIM11	YMR139W	MLH2	Q07980	695 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	SIL1	Q08199	421 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	IRC13	Q08630	104 aa		3.84	□□□□□ -1.79
RIM11	YMR139W	NPP1	P25353	742 aa		3.83	□□□□□ -1.8
RIM11	YMR139W	PWP2	P25635	923 aa	Known RBP	3.83	□□□□□ -1.8
RIM11	YMR139W	GCG1	P32656	232 aa	Known RBP	3.83	□□□□□ -1.8
RIM11	YMR139W	ORC2	P32833	620 aa		3.83	□□□□□ -1.8
RIM11	YMR139W	HIS7	P33734	552 aa	Known RBP	3.83	□□□□□ -1.8
RIM11	YMR139W	VHR1	P40522	640 aa		3.83	□□□□□ -1.8
RIM11	YMR139W	YJR079W	P47126	109 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms