RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCE1	YKL011C	RKI1	Q12189	258 aa		4.17	□□□□□ -1.74
CCE1	YKL011C	SEC12	P11655	471 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	PGI1	P12709	554 aa	Known RBP	4.16	□□□□□ -1.74
CCE1	YKL011C	VPS33	P20795	691 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	MRPL7	P36519	292 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	YJL193W	P39542	402 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	MAD3	P47074	515 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	SNF12	P53628	566 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	EFR3	Q03653	782 aa	Known RBP	4.16	□□□□□ -1.74
CCE1	YKL011C	TRI1	Q05024	226 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	BRE1	Q07457	700 aa	Known RBP	4.16	□□□□□ -1.74
CCE1	YKL011C	LAM4	P38800	1345 aa		4.16	□□□□□ -1.74
CCE1	YKL011C	APA1	P16550	321 aa	Known RBP	4.15	□□□□□ -1.75
CCE1	YKL011C	DHR2	P36009	735 aa	Predicted RBP	4.15	□□□□□ -1.75
CCE1	YKL011C	GMH1	P36125	273 aa		4.15	□□□□□ -1.75
CCE1	YKL011C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CCE1	YKL011C	ACS1	Q01574	713 aa		4.15	□□□□□ -1.75
CCE1	YKL011C	CEF1	Q03654	590 aa	Predicted RBP	4.15	□□□□□ -1.75
CCE1	YKL011C	UFO1	Q04511	668 aa		4.15	□□□□□ -1.75
CCE1	YKL011C	SEC18	P18759	758 aa	Known RBP	4.14	□□□□□ -1.75
CCE1	YKL011C	MSH1	P25846	959 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	APM3	P38153	483 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	YLF2	P38746	405 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	PMC1	P38929	1173 aa	Predicted RBP	4.14	□□□□□ -1.75
CCE1	YKL011C	GSM1	P42950	618 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	SPC98	P53540	846 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	MFM1	Q02783	413 aa		4.14	□□□□□ -1.75
CCE1	YKL011C	BMS1	Q08965	1183 aa	Known RBP	4.14	□□□□□ -1.75
CCE1	YKL011C	PHO81	P17442	1178 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	APN1	P22936	367 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	PWP2	P25635	923 aa	Known RBP	4.13	□□□□□ -1.75
CCE1	YKL011C	CAP1	P28495	268 aa	Known RBP	4.13	□□□□□ -1.75
CCE1	YKL011C	DSS4	P32601	143 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	VPS24	P36095	224 aa	Known RBP	4.13	□□□□□ -1.75
CCE1	YKL011C	STB5	P38699	743 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
CCE1	YKL011C	TRS23	Q03784	219 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	ATG16	Q03818	150 aa		4.13	□□□□□ -1.75
CCE1	YKL011C	MBR1	P23493	339 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	FUI1	P38196	639 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	ACA1	P39970	489 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	IES5	P40060	125 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	VPS27	P40343	622 aa	Known RBP	4.12	□□□□□ -1.75
CCE1	YKL011C	THI6	P41835	540 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	PMT6	P42934	759 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	COS12	P53053	380 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	DAK1	P54838	584 aa	Known RBP	4.12	□□□□□ -1.75
CCE1	YKL011C	STP1	Q00947	519 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	FMP30	Q02883	468 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	VMS1	Q04311	632 aa	Known RBP	4.12	□□□□□ -1.75
CCE1	YKL011C	CRD1	Q07560	283 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	AAD4	Q07747	329 aa		4.12	□□□□□ -1.75
CCE1	YKL011C	STT3	P39007	718 aa	Known RBP	4.11	□□□□□ -1.75
CCE1	YKL011C	SPC72	P39723	622 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	VFA1	P40080	203 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	RPT2	P40327	437 aa	Known RBP	4.11	□□□□□ -1.75
CCE1	YKL011C	POL31	P46957	487 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	YIP4	P53093	235 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	TRS31	Q03337	283 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	ENT2	Q05785	613 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	YPL216W	Q08964	1102 aa		4.11	□□□□□ -1.75
CCE1	YKL011C	PHO5	P00635	467 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	POL3	P15436	1097 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	SIR1	P21691	654 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	MCM3	P24279	971 aa	Known RBP	4.1	□□□□□ -1.75
CCE1	YKL011C	CNE1	P27825	502 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	DBF20	P32328	564 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	MIT1	P40002	666 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	NGL2	Q03264	515 aa	Known RBP	4.1	□□□□□ -1.75
CCE1	YKL011C	YDR179W-A	Q03983	463 aa		4.1	□□□□□ -1.75
CCE1	YKL011C	CTT1	P06115	562 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	BET2	P20133	325 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	RPA135	P22138	1203 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	MSM1	P22438	575 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	RPS7A	P26786	190 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	PRE2	P30656	287 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	PTH2	P34222	208 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	YMC2	P38087	329 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	IDS2	P46958	469 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	YGR021W	P53212	290 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	CPR6	P53691	371 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	BUD17	P53727	317 aa		4.09	□□□□□ -1.75
CCE1	YKL011C	RPS15	Q01855	142 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	MDM20	Q12387	796 aa	Known RBP	4.09	□□□□□ -1.75
CCE1	YKL011C	TRX2	P22803	104 aa	Known RBP	4.08	□□□□□ -1.76
CCE1	YKL011C	PRP45	P28004	379 aa	Predicted RBP	4.08	□□□□□ -1.76
CCE1	YKL011C	FRD1	P32614	470 aa	Known RBP	4.08	□□□□□ -1.76
CCE1	YKL011C	MRS6	P32864	603 aa	Known RBP	4.08	□□□□□ -1.76
CCE1	YKL011C	CCL1	P37366	393 aa		4.08	□□□□□ -1.76
CCE1	YKL011C	PIH1	P38768	344 aa		4.08	□□□□□ -1.76
CCE1	YKL011C	USA1	Q03714	838 aa		4.08	□□□□□ -1.76
CCE1	YKL011C	VPS64	Q03944	604 aa		4.08	□□□□□ -1.76
CCE1	YKL011C	CIA1	Q05583	330 aa		4.08	□□□□□ -1.76
CCE1	YKL011C	IWR1	Q07532	353 aa	Predicted RBP	4.08	□□□□□ -1.76
CCE1	YKL011C	ADE3	P07245	946 aa	Known RBP	4.07	□□□□□ -1.76
CCE1	YKL011C	MIS1	P09440	975 aa	Known RBP	4.07	□□□□□ -1.76
CCE1	YKL011C	STE12	P13574	688 aa		4.07	□□□□□ -1.76
CCE1	YKL011C	NOP1	P15646	327 aa	Known RBP	4.07	□□□□□ -1.76
CCE1	YKL011C	SWI4	P25302	1093 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 104.1 ms