RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C LOT5P34234 306 aa2.48□□□□□ -2.01
VPS35YJL154C CDS1P38221 457 aa2.48□□□□□ -2.01
VPS35YJL154C UME6P39001 836 aa2.48□□□□□ -2.01
VPS35YJL154C YJL206CP39529 758 aa2.48□□□□□ -2.01
VPS35YJL154C PSF2P40359 213 aa2.48□□□□□ -2.01
VPS35YJL154C SKP2P42843 763 aa2.48□□□□□ -2.01
VPS35YJL154C PMT6P42934 759 aa2.48□□□□□ -2.01
VPS35YJL154C SMX3P54999 86 aaPredicted RBP2.48□□□□□ -2.01
VPS35YJL154C MUK1Q02866 612 aa2.48□□□□□ -2.01
VPS35YJL154C YMR018WQ04364 514 aa2.48□□□□□ -2.01
VPS35YJL154C RGC1Q06108 1083 aaKnown RBP2.48□□□□□ -2.01
VPS35YJL154C AAD4Q07747 329 aa2.48□□□□□ -2.01
VPS35YJL154C TGS1Q12052 315 aa2.48□□□□□ -2.01
VPS35YJL154C NUC1P08466 329 aa2.48□□□□□ -2.01
VPS35YJL154C CAP1P28495 268 aaKnown RBP2.48□□□□□ -2.01
VPS35YJL154C DBF20P32328 564 aa2.48□□□□□ -2.01
VPS35YJL154C RRP8P38961 392 aaKnown RBP2.48□□□□□ -2.01
VPS35YJL154C BDH2P39713 417 aa2.48□□□□□ -2.01
VPS35YJL154C LRO1P40345 661 aa2.48□□□□□ -2.01
VPS35YJL154C STU2P46675 888 aa2.48□□□□□ -2.01
VPS35YJL154C STB4P50104 949 aa2.48□□□□□ -2.01
VPS35YJL154C AAT1Q01802 451 aa2.48□□□□□ -2.01
VPS35YJL154C BMS1Q08965 1183 aaKnown RBP2.48□□□□□ -2.01
VPS35YJL154C LAM4P38800 1345 aa2.48□□□□□ -2.01
VPS35YJL154C RKR1Q04781 1562 aa2.47□□□□□ -2.01
VPS35YJL154C CLB4P24871 460 aa2.47□□□□□ -2.01
VPS35YJL154C SET3P36124 751 aa2.47□□□□□ -2.01
VPS35YJL154C STB5P38699 743 aa2.47□□□□□ -2.01
VPS35YJL154C SMK1P41808 388 aa2.47□□□□□ -2.01
VPS35YJL154C YPL108WQ02872 168 aaPredicted RBP2.47□□□□□ -2.01
VPS35YJL154C EFR3Q03653 782 aaKnown RBP2.47□□□□□ -2.01
VPS35YJL154C YDL073WQ07454 984 aa2.47□□□□□ -2.01
VPS35YJL154C DIN7Q12086 430 aa2.47□□□□□ -2.01
VPS35YJL154C APA1P16550 321 aaKnown RBP2.47□□□□□ -2.01
VPS35YJL154C RPT3P33298 428 aaKnown RBP2.47□□□□□ -2.01
VPS35YJL154C OAR1P35731 278 aa2.47□□□□□ -2.01
VPS35YJL154C MRPL7P36519 292 aa2.47□□□□□ -2.01
VPS35YJL154C PUS4P48567 403 aaKnown RBP2.47□□□□□ -2.01
VPS35YJL154C YIP4P53093 235 aa2.47□□□□□ -2.01
VPS35YJL154C ACS1Q01574 713 aa2.47□□□□□ -2.01
VPS35YJL154C MRPL13Q02204 264 aa2.47□□□□□ -2.01
VPS35YJL154C TRS31Q03337 283 aa2.47□□□□□ -2.01
VPS35YJL154C ENT2Q05785 613 aa2.47□□□□□ -2.01
VPS35YJL154C BRE1Q07457 700 aaKnown RBP2.47□□□□□ -2.01
VPS35YJL154C IWR1Q07532 353 aaPredicted RBP2.47□□□□□ -2.01
VPS35YJL154C SIR1P21691 654 aa2.46□□□□□ -2.01
VPS35YJL154C VPS34P22543 875 aa2.46□□□□□ -2.01
VPS35YJL154C RIT1P23796 513 aa2.46□□□□□ -2.01
VPS35YJL154C MCM3P24279 971 aaKnown RBP2.46□□□□□ -2.01
VPS35YJL154C STT3P39007 718 aaKnown RBP2.46□□□□□ -2.01
VPS35YJL154C YDL183CP48569 320 aa2.46□□□□□ -2.01
VPS35YJL154C MOT3P54785 490 aaKnown RBP2.46□□□□□ -2.01
VPS35YJL154C GFD1Q04839 188 aaKnown RBP2.46□□□□□ -2.01
VPS35YJL154C PDR15Q04182 1529 aaKnown RBP2.46□□□□□ -2.02
VPS35YJL154C GFA1P14742 717 aaKnown RBP2.46□□□□□ -2.02
VPS35YJL154C SSH4P32343 579 aa2.46□□□□□ -2.02
VPS35YJL154C PSY4P38193 441 aa2.46□□□□□ -2.02
VPS35YJL154C SAP4P53036 818 aa2.46□□□□□ -2.02
VPS35YJL154C CTF4Q01454 927 aa2.46□□□□□ -2.02
VPS35YJL154C NUP120P35729 1037 aa2.46□□□□□ -2.02
VPS35YJL154C CCL1P37366 393 aa2.46□□□□□ -2.02
VPS35YJL154C CPR6P53691 371 aaKnown RBP2.46□□□□□ -2.02
VPS35YJL154C BUD17P53727 317 aa2.46□□□□□ -2.02
VPS35YJL154C ATG2P53855 1592 aa2.46□□□□□ -2.02
VPS35YJL154C GTR1Q00582 310 aa2.46□□□□□ -2.02
VPS35YJL154C YDR179W-AQ03983 463 aa2.46□□□□□ -2.02
VPS35YJL154C SPO11P23179 398 aa2.45□□□□□ -2.02
VPS35YJL154C MSS1P32559 526 aaPredicted RBP2.45□□□□□ -2.02
VPS35YJL154C SLC1P33333 303 aa2.45□□□□□ -2.02
VPS35YJL154C MOH1P38191 138 aa2.45□□□□□ -2.02
VPS35YJL154C MTG2P38860 518 aa2.45□□□□□ -2.02
VPS35YJL154C RAD26P40352 1085 aa2.45□□□□□ -2.02
VPS35YJL154C SDS3P40505 327 aa2.45□□□□□ -2.02
VPS35YJL154C ZAP1P47043 880 aa2.45□□□□□ -2.02
VPS35YJL154C GND2P53319 492 aa2.45□□□□□ -2.02
VPS35YJL154C VPS72Q03388 795 aa2.45□□□□□ -2.02
VPS35YJL154C NTE1Q04958 1679 aa2.45□□□□□ -2.02
VPS35YJL154C TPK1P06244 397 aa2.45□□□□□ -2.02
VPS35YJL154C ADE3P07245 946 aaKnown RBP2.45□□□□□ -2.02
VPS35YJL154C STE12P13574 688 aa2.45□□□□□ -2.02
VPS35YJL154C RPA135P22138 1203 aaKnown RBP2.45□□□□□ -2.02
VPS35YJL154C SIP1P32578 815 aa2.45□□□□□ -2.02
VPS35YJL154C XRS2P33301 854 aa2.45□□□□□ -2.02
VPS35YJL154C TEF4P36008 412 aaKnown RBP2.45□□□□□ -2.02
VPS35YJL154C FSH1P38777 243 aaKnown RBP2.45□□□□□ -2.02
VPS35YJL154C CHS7P38843 316 aa2.45□□□□□ -2.02
VPS35YJL154C SPC72P39723 622 aa2.45□□□□□ -2.02
VPS35YJL154C KAP123P40069 1113 aaKnown RBP2.45□□□□□ -2.02
VPS35YJL154C POL31P46957 487 aa2.45□□□□□ -2.02
VPS35YJL154C TRS130Q03660 1102 aa2.45□□□□□ -2.02
VPS35YJL154C CRF1Q04930 467 aa2.45□□□□□ -2.02
VPS35YJL154C ARR3Q06598 404 aa2.45□□□□□ -2.02
VPS35YJL154C CRT10Q08226 957 aa2.45□□□□□ -2.02
VPS35YJL154C MRH1Q12117 320 aaPredicted RBP2.45□□□□□ -2.02
VPS35YJL154C NUM1Q00402 2748 aa2.44□□□□□ -2.02
VPS35YJL154C MRPL9P31334 269 aa2.44□□□□□ -2.02
VPS35YJL154C CNS1P33313 385 aa2.44□□□□□ -2.02
VPS35YJL154C IES5P40060 125 aa2.44□□□□□ -2.02
VPS35YJL154C PUG1P40100 303 aa2.44□□□□□ -2.02
VPS35YJL154C ERR3P42222 437 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms