RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MRPL7P36519 292 aa3.04□□□□□ -1.92
PEP8YJL053W SDS24P38314 527 aa3.04□□□□□ -1.92
PEP8YJL053W YHR033WP38690 423 aa3.04□□□□□ -1.92
PEP8YJL053W BUD8P41698 603 aa3.04□□□□□ -1.92
PEP8YJL053W YGL260WP53056 76 aa3.04□□□□□ -1.92
PEP8YJL053W SQS1P53866 767 aaKnown RBP3.04□□□□□ -1.92
PEP8YJL053W GFD1Q04839 188 aaKnown RBP3.04□□□□□ -1.92
PEP8YJL053W TPO3Q06451 622 aa3.04□□□□□ -1.92
PEP8YJL053W GRS2Q06817 618 aa3.04□□□□□ -1.92
PEP8YJL053W YPL216WQ08964 1102 aa3.04□□□□□ -1.92
PEP8YJL053W AIM41Q12032 185 aa3.04□□□□□ -1.92
PEP8YJL053W CDC26P14724 124 aa3.03□□□□□ -1.92
PEP8YJL053W HEM12P32347 362 aaPredicted RBP3.03□□□□□ -1.92
PEP8YJL053W PLC1P32383 869 aa3.03□□□□□ -1.92
PEP8YJL053W MF(ALPHA)2P32435 120 aa3.03□□□□□ -1.92
PEP8YJL053W HXT4P32467 576 aa3.03□□□□□ -1.92
PEP8YJL053W SER1P33330 395 aaKnown RBP3.03□□□□□ -1.92
PEP8YJL053W PPE1P38796 400 aa3.03□□□□□ -1.92
PEP8YJL053W YNL018CP53976 612 aa3.03□□□□□ -1.92
PEP8YJL053W FDC1Q03034 503 aa3.03□□□□□ -1.92
PEP8YJL053W HLR1Q04429 423 aa3.03□□□□□ -1.92
PEP8YJL053W NGL1Q08213 363 aaKnown RBP3.03□□□□□ -1.92
PEP8YJL053W RDL1Q12305 139 aaKnown RBP3.03□□□□□ -1.92
PEP8YJL053W TUF1P02992 437 aaKnown RBP3.02□□□□□ -1.93
PEP8YJL053W GSY2P27472 705 aa3.02□□□□□ -1.93
PEP8YJL053W PRE4P30657 266 aa3.02□□□□□ -1.93
PEP8YJL053W SSP120P39931 234 aaKnown RBP3.02□□□□□ -1.93
PEP8YJL053W YIL092WP40497 633 aa3.02□□□□□ -1.93
PEP8YJL053W PRM2P40534 656 aa3.02□□□□□ -1.93
PEP8YJL053W NOP2P40991 618 aaKnown RBP3.02□□□□□ -1.93
PEP8YJL053W TAN1P53072 289 aaPredicted RBP3.02□□□□□ -1.93
PEP8YJL053W YLR111WQ12528 110 aa3.02□□□□□ -1.93
PEP8YJL053W VPS5Q92331 675 aa3.02□□□□□ -1.93
PEP8YJL053W YEL076C-AP0CX16 216 aa3.01□□□□□ -1.93
PEP8YJL053W YLR464WP0CX17 216 aa3.01□□□□□ -1.93
PEP8YJL053W TAF5P38129 798 aa3.01□□□□□ -1.93
PEP8YJL053W ENP1P38333 483 aaKnown RBP3.01□□□□□ -1.93
PEP8YJL053W SAW1P39735 261 aa3.01□□□□□ -1.93
PEP8YJL053W YEL076CP39971 216 aa3.01□□□□□ -1.93
PEP8YJL053W CFD1P40558 293 aa3.01□□□□□ -1.93
PEP8YJL053W YIR016WP40572 265 aa3.01□□□□□ -1.93
PEP8YJL053W LYS20P48570 428 aaKnown RBP3.01□□□□□ -1.93
PEP8YJL053W MDR1P53258 950 aa3.01□□□□□ -1.93
PEP8YJL053W MTD1Q02046 320 aaKnown RBP3.01□□□□□ -1.93
PEP8YJL053W YPL071CQ02864 156 aa3.01□□□□□ -1.93
PEP8YJL053W CEF1Q03654 590 aaPredicted RBP3.01□□□□□ -1.93
PEP8YJL053W CWC2Q12046 339 aaPredicted RBP3.01□□□□□ -1.93
PEP8YJL053W SLX4Q12098 748 aa3.01□□□□□ -1.93
PEP8YJL053W PSF3Q12146 194 aa3.01□□□□□ -1.93
PEP8YJL053W YER190C-BP0CX94 160 aa3□□□□□ -1.93
PEP8YJL053W YEL077W-AP0CX95 160 aa3□□□□□ -1.93
PEP8YJL053W YGR296C-BP0CX96 160 aa3□□□□□ -1.93
PEP8YJL053W YPL283W-BP0CX97 160 aa3□□□□□ -1.93
PEP8YJL053W YPR204C-AP0CX98 160 aa3□□□□□ -1.93
PEP8YJL053W SEC12P11655 471 aa3□□□□□ -1.93
PEP8YJL053W HMG2P12684 1045 aa3□□□□□ -1.93
PEP8YJL053W ATP12P22135 325 aa3□□□□□ -1.93
PEP8YJL053W NIC96P34077 839 aa3□□□□□ -1.93
PEP8YJL053W DHR2P36009 735 aaPredicted RBP3□□□□□ -1.93
PEP8YJL053W SDS22P36047 338 aa3□□□□□ -1.93
PEP8YJL053W MTG2P38860 518 aa3□□□□□ -1.93
PEP8YJL053W STL1P39932 569 aa3□□□□□ -1.93
PEP8YJL053W YEL025CP39991 1188 aa3□□□□□ -1.93
PEP8YJL053W IRC5P43610 853 aa3□□□□□ -1.93
PEP8YJL053W PEF1P53238 335 aa3□□□□□ -1.93
PEP8YJL053W PEX8P53248 589 aa3□□□□□ -1.93
PEP8YJL053W BOP3P53958 396 aa3□□□□□ -1.93
PEP8YJL053W SND1Q04007 877 aa3□□□□□ -1.93
PEP8YJL053W IOC4Q04213 475 aa3□□□□□ -1.93
PEP8YJL053W ECM38Q05902 660 aaPredicted RBP3□□□□□ -1.93
PEP8YJL053W YCG1Q06680 1035 aa3□□□□□ -1.93
PEP8YJL053W NRT1Q08485 598 aa3□□□□□ -1.93
PEP8YJL053W ATP4P05626 244 aa2.99□□□□□ -1.93
PEP8YJL053W PHO3P24031 467 aa2.99□□□□□ -1.93
PEP8YJL053W CWH43P25618 953 aa2.99□□□□□ -1.93
PEP8YJL053W CNE1P27825 502 aa2.99□□□□□ -1.93
PEP8YJL053W CRG1P38892 291 aaRIP-Chip data2.99□□□□□ -1.93not detected
PEP8YJL053W TMN3P40071 706 aa2.99□□□□□ -1.93
PEP8YJL053W FTR1P40088 404 aa2.99□□□□□ -1.93
PEP8YJL053W YFL015CP43578 164 aa2.99□□□□□ -1.93
PEP8YJL053W IRC7P43623 340 aa2.99□□□□□ -1.93
PEP8YJL053W BUD17P53727 317 aa2.99□□□□□ -1.93
PEP8YJL053W CNM67P53865 581 aaKnown RBP2.99□□□□□ -1.93
PEP8YJL053W YNL034WP53963 612 aa2.99□□□□□ -1.93
PEP8YJL053W NUR1Q12066 484 aa2.99□□□□□ -1.93
PEP8YJL053W HOS1Q12214 470 aa2.99□□□□□ -1.93
PEP8YJL053W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
PEP8YJL053W NYV1Q12255 253 aa2.99□□□□□ -1.93
PEP8YJL053W BI2P03873 423 aa2.98□□□□□ -1.93
PEP8YJL053W MTC7P32633 139 aa2.98□□□□□ -1.93
PEP8YJL053W YKL133CP36066 463 aa2.98□□□□□ -1.93
PEP8YJL053W CDS1P38221 457 aa2.98□□□□□ -1.93
PEP8YJL053W EAF5P39995 279 aa2.98□□□□□ -1.93
PEP8YJL053W MDV1P47025 714 aa2.98□□□□□ -1.93
PEP8YJL053W COP1P53622 1201 aaKnown RBP2.98□□□□□ -1.93
PEP8YJL053W MPD2Q99316 277 aa2.98□□□□□ -1.93
PEP8YJL053W SST2P11972 698 aaKnown RBP2.97□□□□□ -1.93
PEP8YJL053W YCP4P25349 247 aaKnown RBP2.97□□□□□ -1.93
PEP8YJL053W PET309P32522 965 aaPredicted RBP2.97□□□□□ -1.93
PEP8YJL053W ARC40P38328 384 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms