RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C ZRT2Q12436 422 aa2.16□□□□□ -2.06
RTT101YJL047C SKS1Q12505 502 aa2.16□□□□□ -2.06
RTT101YJL047C RPB2P08518 1224 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C OM45P16547 393 aa2.16□□□□□ -2.06
RTT101YJL047C SNF5P18480 905 aa2.16□□□□□ -2.06
RTT101YJL047C RFA1P22336 621 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C ARG1P22768 420 aa2.16□□□□□ -2.06
RTT101YJL047C RSC6P25632 483 aa2.16□□□□□ -2.06
RTT101YJL047C PEP3P27801 918 aa2.16□□□□□ -2.06
RTT101YJL047C ERV1P27882 189 aa2.16□□□□□ -2.06
RTT101YJL047C SUR1P33300 382 aa2.16□□□□□ -2.06
RTT101YJL047C HEL1P36113 551 aa2.16□□□□□ -2.06
RTT101YJL047C UBP13P38187 747 aa2.16□□□□□ -2.06
RTT101YJL047C ATF1P40353 525 aa2.16□□□□□ -2.06
RTT101YJL047C CEP3P40969 608 aa2.16□□□□□ -2.06
RTT101YJL047C BST1P43571 1029 aa2.16□□□□□ -2.06
RTT101YJL047C UBP15P50101 1230 aa2.16□□□□□ -2.06
RTT101YJL047C SOK2P53438 785 aaPredicted RBP2.16□□□□□ -2.06
RTT101YJL047C JJJ1P53863 590 aa2.16□□□□□ -2.06
RTT101YJL047C ARX1Q03862 593 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C GAD1Q04792 585 aa2.16□□□□□ -2.06
RTT101YJL047C ASM4Q05166 528 aa2.16□□□□□ -2.06
RTT101YJL047C DON1Q05610 365 aa2.16□□□□□ -2.06
RTT101YJL047C SPH1Q06160 661 aa2.16□□□□□ -2.06
RTT101YJL047C YLR456WQ06199 204 aa2.16□□□□□ -2.06
RTT101YJL047C ARV1Q06541 321 aa2.16□□□□□ -2.06
RTT101YJL047C RCL1Q08096 367 aaPredicted RBP2.16□□□□□ -2.06
RTT101YJL047C GPB1Q08886 897 aa2.16□□□□□ -2.06
RTT101YJL047C APL4Q12028 832 aa2.16□□□□□ -2.06
RTT101YJL047C SPE3Q12074 293 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C NMD4Q12129 218 aa2.16□□□□□ -2.06
RTT101YJL047C CDC24P11433 854 aaPredicted RBP2.15□□□□□ -2.07
RTT101YJL047C CBS1P14066 229 aa2.15□□□□□ -2.07
RTT101YJL047C ERS1P17261 260 aa2.15□□□□□ -2.07
RTT101YJL047C MDH1P17505 334 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
RTT101YJL047C HNM1P19807 563 aa2.15□□□□□ -2.07
RTT101YJL047C DBP3P20447 523 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C PRP28P23394 588 aa2.15□□□□□ -2.07
RTT101YJL047C OCA4P25366 362 aa2.15□□□□□ -2.07
RTT101YJL047C LOT5P34234 306 aa2.15□□□□□ -2.07
RTT101YJL047C YKR075CP36155 307 aa2.15□□□□□ -2.07
RTT101YJL047C POA1P38218 177 aa2.15□□□□□ -2.07
RTT101YJL047C YHR131CP38835 850 aa2.15□□□□□ -2.07
RTT101YJL047C SMF1P38925 575 aa2.15□□□□□ -2.07
RTT101YJL047C FLC2P39719 783 aa2.15□□□□□ -2.07
RTT101YJL047C SSP120P39931 234 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C RPN3P40016 523 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C MRX1P40050 688 aa2.15□□□□□ -2.07
RTT101YJL047C RAD17P48581 401 aa2.15□□□□□ -2.07
RTT101YJL047C SHE4P51534 789 aa2.15□□□□□ -2.07
RTT101YJL047C SHE10P53075 577 aa2.15□□□□□ -2.07
RTT101YJL047C COG1P53079 417 aa2.15□□□□□ -2.07
RTT101YJL047C EOS1P53938 366 aa2.15□□□□□ -2.07
RTT101YJL047C GPD1Q00055 391 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C REG1Q00816 1014 aa2.15□□□□□ -2.07
RTT101YJL047C AVO1Q08236 1176 aa2.15□□□□□ -2.07
RTT101YJL047C YPL277CQ08989 487 aa2.15□□□□□ -2.07
RTT101YJL047C MDY2Q12285 212 aa2.15□□□□□ -2.07
RTT101YJL047C ATG11Q12527 1178 aa2.15□□□□□ -2.07
RTT101YJL047C CET1O13297 549 aaPredicted RBP2.15□□□□□ -2.07
RTT101YJL047C RPS9AO13516 197 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C YLR302CO13544 120 aa2.15□□□□□ -2.07
RTT101YJL047C CDC19P00549 500 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C DAP2P18962 818 aa2.15□□□□□ -2.07
RTT101YJL047C TRK2P28584 889 aa2.15□□□□□ -2.07
RTT101YJL047C MSP1P28737 362 aa2.15□□□□□ -2.07
RTT101YJL047C NIP1P32497 812 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C VPS17P32913 551 aa2.15□□□□□ -2.07
RTT101YJL047C RMA1P36001 430 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C TAF5P38129 798 aa2.15□□□□□ -2.07
RTT101YJL047C HSM3P38348 480 aa2.15□□□□□ -2.07
RTT101YJL047C YHR033WP38690 423 aa2.15□□□□□ -2.07
RTT101YJL047C VMA13P41807 478 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C SSU1P41930 458 aa2.15□□□□□ -2.07
RTT101YJL047C CCT7P42943 550 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C EXG2P52911 562 aa2.15□□□□□ -2.07
RTT101YJL047C LCL3P53153 274 aa2.15□□□□□ -2.07
RTT101YJL047C CUL3P53202 744 aa2.15□□□□□ -2.07
RTT101YJL047C TAM41P53230 385 aa2.15□□□□□ -2.07
RTT101YJL047C TOF2Q02208 771 aa2.15□□□□□ -2.07
RTT101YJL047C YKR011CQ02209 353 aa2.15□□□□□ -2.07
RTT101YJL047C YMR210WQ03649 449 aa2.15□□□□□ -2.07
RTT101YJL047C YAP6Q03935 383 aa2.15□□□□□ -2.07
RTT101YJL047C VBA4Q04602 768 aaKnown RBP2.15□□□□□ -2.07
RTT101YJL047C STP3Q05937 343 aa2.15□□□□□ -2.07
RTT101YJL047C YDL176WQ12027 708 aa2.15□□□□□ -2.07
RTT101YJL047C YLR358CO13565 187 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-LR1P0C2J4 438 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-FP0CX61 438 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-GR2P0CX62 438 aa2.14□□□□□ -2.07
RTT101YJL047C PCK1P10963 549 aa2.14□□□□□ -2.07
RTT101YJL047C BIK1P11709 440 aa2.14□□□□□ -2.07
RTT101YJL047C TY2A-CP25383 438 aa2.14□□□□□ -2.07
RTT101YJL047C SPB1P25582 841 aaPredicted RBP2.14□□□□□ -2.07
RTT101YJL047C CWH43P25618 953 aa2.14□□□□□ -2.07
RTT101YJL047C YEL043WP32618 956 aa2.14□□□□□ -2.07
RTT101YJL047C NIP100P33420 868 aa2.14□□□□□ -2.07
RTT101YJL047C LRG1P35688 1017 aa2.14□□□□□ -2.07
RTT101YJL047C MRPL36P36531 177 aa2.14□□□□□ -2.07
RTT101YJL047C MIP6P38760 659 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms