RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C DSE1P40077 573 aa3.67□□□□□ -1.82
SSM4YIL030C CCT7P42943 550 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C PIP2P52960 996 aa3.67□□□□□ -1.82
SSM4YIL030C ERP6P53198 216 aa3.67□□□□□ -1.82
SSM4YIL030C YMR074CQ04773 145 aa3.67□□□□□ -1.82
SSM4YIL030C ADE13Q05911 482 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C GRX8Q05926 109 aa3.67□□□□□ -1.82
SSM4YIL030C ECM30Q06673 1274 aa3.67□□□□□ -1.82
SSM4YIL030C IES4Q08561 116 aa3.67□□□□□ -1.82
SSM4YIL030C VPS54Q12071 889 aa3.67□□□□□ -1.82
SSM4YIL030C SLX4Q12098 748 aa3.67□□□□□ -1.82
SSM4YIL030C BSC1Q12140 328 aa3.67□□□□□ -1.82
SSM4YIL030C RTN2Q12443 393 aa3.67□□□□□ -1.82
SSM4YIL030C TOM1Q03280 3268 aa3.67□□□□□ -1.82
SSM4YIL030C COX4P04037 155 aa3.67□□□□□ -1.82
SSM4YIL030C TPK1P06244 397 aa3.67□□□□□ -1.82
SSM4YIL030C RPS4AP0CX35 261 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C RPS4BP0CX36 261 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C SLM5P25345 492 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C STE14P32584 239 aa3.67□□□□□ -1.82
SSM4YIL030C SEC6P32844 805 aa3.67□□□□□ -1.82
SSM4YIL030C PRP40P33203 583 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C SAS3P34218 831 aa3.67□□□□□ -1.82
SSM4YIL030C NUP120P35729 1037 aa3.67□□□□□ -1.82
SSM4YIL030C ROT2P38138 954 aa3.67□□□□□ -1.82
SSM4YIL030C FUI1P38196 639 aa3.67□□□□□ -1.82
SSM4YIL030C IST2P38250 946 aa3.67□□□□□ -1.82
SSM4YIL030C MEF2P39677 819 aa3.67□□□□□ -1.82
SSM4YIL030C SAH1P39954 449 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C CAB2P40506 365 aa3.67□□□□□ -1.82
SSM4YIL030C TAF1P46677 1066 aa3.67□□□□□ -1.82
SSM4YIL030C CPR7P47103 393 aa3.67□□□□□ -1.82
SSM4YIL030C ASN2P49090 572 aaKnown RBP3.67□□□□□ -1.82
SSM4YIL030C NOP19P53317 196 aaPredicted RBP3.67□□□□□ -1.82
SSM4YIL030C TEF1P02994 458 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C PRT1P06103 763 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C KIN82P25341 720 aa3.66□□□□□ -1.82
SSM4YIL030C DMC1P25453 334 aa3.66□□□□□ -1.82
SSM4YIL030C GIP1P38229 639 aa3.66□□□□□ -1.82
SSM4YIL030C TDA11P38854 504 aa3.66□□□□□ -1.82
SSM4YIL030C FAA2P39518 744 aa3.66□□□□□ -1.82
SSM4YIL030C NBP35P52920 328 aa3.66□□□□□ -1.82
SSM4YIL030C DRN1P53255 507 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C TOF2Q02208 771 aa3.66□□□□□ -1.82
SSM4YIL030C GRX3Q03835 250 aa3.66□□□□□ -1.82
SSM4YIL030C PHO92Q06390 306 aa3.66□□□□□ -1.82
SSM4YIL030C ASA1Q06822 443 aa3.66□□□□□ -1.82
SSM4YIL030C AAT2P23542 418 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C DBR1P24309 405 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C ADP1P25371 1049 aa3.66□□□□□ -1.82
SSM4YIL030C POL4P25615 582 aa3.66□□□□□ -1.82
SSM4YIL030C SAC6P32599 642 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C PPQ1P32945 549 aa3.66□□□□□ -1.82
SSM4YIL030C RPT1P33299 467 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C TIF3P34167 436 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C SUL1P38359 859 aa3.66□□□□□ -1.82
SSM4YIL030C KEL1P38853 1164 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C SSP120P39931 234 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C GCD14P46959 383 aaPredicted RBP3.66□□□□□ -1.82
SSM4YIL030C CLA4P48562 842 aa3.66□□□□□ -1.82
SSM4YIL030C RFX1P48743 811 aa3.66□□□□□ -1.82
SSM4YIL030C BNI5P53890 448 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C TMA20P89886 181 aaPredicted RBP3.66□□□□□ -1.82
SSM4YIL030C ATP25Q03153 612 aa3.66□□□□□ -1.82
SSM4YIL030C ACL4Q03771 387 aa3.66□□□□□ -1.82
SSM4YIL030C YDR131CQ03899 556 aa3.66□□□□□ -1.82
SSM4YIL030C HFD1Q04458 532 aa3.66□□□□□ -1.82
SSM4YIL030C TRM10Q12400 293 aa3.66□□□□□ -1.82
SSM4YIL030C COR1P07256 457 aa3.66□□□□□ -1.82
SSM4YIL030C CBF2P32504 956 aa3.66□□□□□ -1.82
SSM4YIL030C CEM1P39525 442 aa3.66□□□□□ -1.82
SSM4YIL030C ACO2P39533 789 aa3.66□□□□□ -1.82
SSM4YIL030C KRE29P40026 464 aa3.66□□□□□ -1.82
SSM4YIL030C BNA3P47039 444 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C GPI8P49018 411 aa3.66□□□□□ -1.82
SSM4YIL030C ASI2P53895 289 aa3.66□□□□□ -1.82
SSM4YIL030C UTP4Q06679 776 aaKnown RBP3.66□□□□□ -1.82
SSM4YIL030C VAM6Q07468 1049 aa3.66□□□□□ -1.82
SSM4YIL030C SMC5Q08204 1093 aa3.66□□□□□ -1.82
SSM4YIL030C SIA1Q12212 622 aa3.66□□□□□ -1.82
SSM4YIL030C SSC1P0CS90 654 aaKnown RBP3.65□□□□□ -1.82
SSM4YIL030C THR1P17423 357 aaKnown RBP3.65□□□□□ -1.82
SSM4YIL030C PAT1P25644 796 aaKnown RBP3.65□□□□□ -1.82
SSM4YIL030C EFT1P32324 842 aaKnown RBP3.65□□□□□ -1.82
SSM4YIL030C MUD1P32605 298 aaKnown RBP3.65□□□□□ -1.82
SSM4YIL030C NTR2P36118 322 aaPredicted RBP3.65□□□□□ -1.82
SSM4YIL030C ATG12P38316 186 aa3.65□□□□□ -1.82
SSM4YIL030C YAP1801P38856 637 aa3.65□□□□□ -1.82
SSM4YIL030C ALP1P38971 573 aa3.65□□□□□ -1.82
SSM4YIL030C ECM10P39987 644 aa3.65□□□□□ -1.82
SSM4YIL030C RMR1P53060 241 aa3.65□□□□□ -1.82
SSM4YIL030C TRS130Q03660 1102 aa3.65□□□□□ -1.82
SSM4YIL030C IVY1Q04934 453 aa3.65□□□□□ -1.82
SSM4YIL030C PSR2Q07949 397 aa3.65□□□□□ -1.82
SSM4YIL030C YPR202WQ08993 238 aa3.65□□□□□ -1.82
SSM4YIL030C HER1Q12276 1246 aa3.65□□□□□ -1.82
SSM4YIL030C RIB3Q99258 208 aa3.65□□□□□ -1.82
SSM4YIL030C PWP1P21304 576 aaKnown RBP3.65□□□□□ -1.83
SSM4YIL030C RIB7P33312 244 aa3.65□□□□□ -1.83
SSM4YIL030C RPC37P36121 282 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms