RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C PIN4P34217 668 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
PXR1YGR280C APM3P38153 483 aa4.54□□□□□ -1.68
PXR1YGR280C SMF1P38925 575 aa4.54□□□□□ -1.68
PXR1YGR280C FTR1P40088 404 aa4.54□□□□□ -1.68
PXR1YGR280C NUP82P40368 713 aa4.54□□□□□ -1.68
PXR1YGR280C BST1P43571 1029 aa4.54□□□□□ -1.68
PXR1YGR280C HSV2P50079 448 aaPredicted RBP4.54□□□□□ -1.68
PXR1YGR280C HRQ1Q05549 1077 aa4.54□□□□□ -1.68
PXR1YGR280C DIC1Q06143 298 aa4.54□□□□□ -1.68
PXR1YGR280C YCS4Q06156 1176 aa4.54□□□□□ -1.68
PXR1YGR280C NKP2Q06162 153 aa4.54□□□□□ -1.68
PXR1YGR280C PEX15Q08215 383 aa4.54□□□□□ -1.68
PXR1YGR280C GNT1Q12096 491 aa4.54□□□□□ -1.68
PXR1YGR280C SLX4Q12098 748 aa4.54□□□□□ -1.68
PXR1YGR280C YEL076C-AP0CX16 216 aa4.53□□□□□ -1.68
PXR1YGR280C YLR464WP0CX17 216 aa4.53□□□□□ -1.68
PXR1YGR280C PDC5P16467 563 aaKnown RBP4.53□□□□□ -1.68
PXR1YGR280C DAL81P21657 970 aa4.53□□□□□ -1.68
PXR1YGR280C SEC62P21825 274 aa4.53□□□□□ -1.68
PXR1YGR280C TYE7P33122 291 aaPredicted RBP4.53□□□□□ -1.68
PXR1YGR280C TAF14P35189 244 aa4.53□□□□□ -1.68
PXR1YGR280C OPY1P38271 328 aa4.53□□□□□ -1.68
PXR1YGR280C CTM1P38818 585 aa4.53□□□□□ -1.68
PXR1YGR280C YEL076CP39971 216 aa4.53□□□□□ -1.68
PXR1YGR280C AIM9P40053 627 aaKnown RBP4.53□□□□□ -1.68
PXR1YGR280C LSM4P40070 187 aaKnown RBP4.53□□□□□ -1.68
PXR1YGR280C DSE1P40077 573 aa4.53□□□□□ -1.68
PXR1YGR280C SPG5P42933 373 aa4.53□□□□□ -1.68
PXR1YGR280C YFL066CP43538 392 aa4.53□□□□□ -1.68
PXR1YGR280C DAS1P47005 663 aa4.53□□□□□ -1.68
PXR1YGR280C NBP35P52920 328 aa4.53□□□□□ -1.68
PXR1YGR280C COP1P53622 1201 aaKnown RBP4.53□□□□□ -1.68
PXR1YGR280C ECM23Q02710 187 aa4.53□□□□□ -1.68
PXR1YGR280C SPG3Q04398 127 aaPredicted RBP4.53□□□□□ -1.68
PXR1YGR280C YDR338CQ05497 695 aa4.53□□□□□ -1.68
PXR1YGR280C CUR1Q06469 252 aa4.53□□□□□ -1.68
PXR1YGR280C HDA3Q06623 655 aa4.53□□□□□ -1.68
PXR1YGR280C ATG10Q07879 167 aa4.53□□□□□ -1.68
PXR1YGR280C RCL1Q08096 367 aaPredicted RBP4.53□□□□□ -1.68
PXR1YGR280C GUP2Q08929 609 aa4.53□□□□□ -1.68
PXR1YGR280C WTM2Q12206 467 aa4.53□□□□□ -1.68
PXR1YGR280C NBL1Q3E7Y6 73 aa4.53□□□□□ -1.68
PXR1YGR280C PHO8P11491 566 aa4.52□□□□□ -1.69
PXR1YGR280C STE6P12866 1290 aa4.52□□□□□ -1.69
PXR1YGR280C VPS1P21576 704 aaKnown RBP4.52□□□□□ -1.69
PXR1YGR280C RRN6P32786 894 aa4.52□□□□□ -1.69
PXR1YGR280C SEC6P32844 805 aa4.52□□□□□ -1.69
PXR1YGR280C SLD2P34252 453 aa4.52□□□□□ -1.69
PXR1YGR280C CTP1P38152 299 aa4.52□□□□□ -1.69
PXR1YGR280C DLD3P39976 496 aaKnown RBP4.52□□□□□ -1.69
PXR1YGR280C EMC4P53073 190 aa4.52□□□□□ -1.69
PXR1YGR280C TRM112P53738 135 aaPredicted RBP4.52□□□□□ -1.69
PXR1YGR280C MOT3P54785 490 aaKnown RBP4.52□□□□□ -1.69
PXR1YGR280C DOS2P54858 310 aa4.52□□□□□ -1.69
PXR1YGR280C EGD1Q02642 157 aaKnown RBP4.52□□□□□ -1.69
PXR1YGR280C STP3Q05937 343 aa4.52□□□□□ -1.69
PXR1YGR280C PMT7Q06644 662 aa4.52□□□□□ -1.69
PXR1YGR280C CSR1Q06705 408 aaKnown RBP4.52□□□□□ -1.69
PXR1YGR280C HMI1Q12039 706 aa4.52□□□□□ -1.69
PXR1YGR280C RPP2BP02400 110 aaKnown RBP4.51□□□□□ -1.69
PXR1YGR280C PPH21P23594 369 aa4.51□□□□□ -1.69
PXR1YGR280C KAE1P36132 386 aa4.51□□□□□ -1.69
PXR1YGR280C PPS1P38148 807 aa4.51□□□□□ -1.69
PXR1YGR280C SEA4P38164 1038 aa4.51□□□□□ -1.69
PXR1YGR280C BUD6P41697 788 aa4.51□□□□□ -1.69
PXR1YGR280C GAT1P43574 510 aa4.51□□□□□ -1.69
PXR1YGR280C ADE12P80210 433 aaKnown RBP4.51□□□□□ -1.69
PXR1YGR280C SIL1Q08199 421 aa4.51□□□□□ -1.69
PXR1YGR280C THI72Q08579 599 aa4.51□□□□□ -1.69
PXR1YGR280C ABP140Q08641 628 aaKnown RBP4.51□□□□□ -1.69
PXR1YGR280C PTC5Q12511 572 aa4.51□□□□□ -1.69
PXR1YGR280C CKA2P19454 339 aa4.5□□□□□ -1.69
PXR1YGR280C PRI2P20457 528 aa4.5□□□□□ -1.69
PXR1YGR280C RNR1P21524 888 aaKnown RBP4.5□□□□□ -1.69
PXR1YGR280C MIH1P23748 554 aa4.5□□□□□ -1.69
PXR1YGR280C PUP1P25043 261 aa4.5□□□□□ -1.69
PXR1YGR280C SAT4P25333 603 aaKnown RBP4.5□□□□□ -1.69
PXR1YGR280C RRT12P25381 491 aa4.5□□□□□ -1.69
PXR1YGR280C VBA3P25594 458 aa4.5□□□□□ -1.69
PXR1YGR280C PMT1P33775 817 aa4.5□□□□□ -1.69
PXR1YGR280C YEL1P34225 687 aa4.5□□□□□ -1.69
PXR1YGR280C VBA5P36172 582 aa4.5□□□□□ -1.69
PXR1YGR280C URA8P38627 578 aaPredicted RBP4.5□□□□□ -1.69
PXR1YGR280C CEM1P39525 442 aa4.5□□□□□ -1.69
PXR1YGR280C KRI1P42846 591 aaKnown RBP4.5□□□□□ -1.69
PXR1YGR280C DAK2P43550 591 aa4.5□□□□□ -1.69
PXR1YGR280C PFD1P46988 109 aa4.5□□□□□ -1.69
PXR1YGR280C YGR153WP48238 217 aa4.5□□□□□ -1.69
PXR1YGR280C MNT2P53059 558 aa4.5□□□□□ -1.69
PXR1YGR280C NNF2P53253 936 aa4.5□□□□□ -1.69
PXR1YGR280C ARP5P53946 755 aa4.5□□□□□ -1.69
PXR1YGR280C PEX25Q02969 394 aa4.5□□□□□ -1.69
PXR1YGR280C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
PXR1YGR280C YOR296WQ08748 1289 aa4.5□□□□□ -1.69
PXR1YGR280C YPL277CQ08989 487 aa4.5□□□□□ -1.69
PXR1YGR280C ARP7Q12406 477 aa4.5□□□□□ -1.69
PXR1YGR280C CDC6P09119 513 aa4.49□□□□□ -1.69
PXR1YGR280C PHO87P25360 923 aa4.49□□□□□ -1.69
PXR1YGR280C SBA1P28707 216 aaKnown RBP4.49□□□□□ -1.69
PXR1YGR280C NAB2P32505 525 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 211.7 ms