RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YDR341CQ05506 607 aaKnown RBP3.4□□□□□ -1.87
XRN1YGL173C CTI6Q08923 506 aa3.4□□□□□ -1.87
XRN1YGL173C APL5Q08951 932 aaKnown RBP3.4□□□□□ -1.87
XRN1YGL173C YJR112W-AQ3E743 109 aa3.4□□□□□ -1.87
XRN1YGL173C CDC24P11433 854 aaPredicted RBP3.4□□□□□ -1.87
XRN1YGL173C URA7P28274 579 aaKnown RBP3.4□□□□□ -1.87
XRN1YGL173C AXL2P38928 823 aa3.4□□□□□ -1.87
XRN1YGL173C XDJ1P39102 459 aa3.4□□□□□ -1.87
XRN1YGL173C RPN14P53196 417 aa3.4□□□□□ -1.87
XRN1YGL173C SPC98P53540 846 aa3.4□□□□□ -1.87
XRN1YGL173C HDA1P53973 706 aa3.4□□□□□ -1.87
XRN1YGL173C SEC39Q12745 709 aa3.4□□□□□ -1.87
XRN1YGL173C PFK2P16862 959 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
XRN1YGL173C NDI1P32340 513 aa3.39□□□□□ -1.87
XRN1YGL173C MRE11P32829 692 aa3.39□□□□□ -1.87
XRN1YGL173C OTU2P38747 307 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C UTP7P40055 554 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C DPH1P40487 425 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C URB2P47108 1174 aa3.39□□□□□ -1.87
XRN1YGL173C ASE1P50275 885 aa3.39□□□□□ -1.87
XRN1YGL173C MLC1P53141 149 aa3.39□□□□□ -1.87
XRN1YGL173C YNR071CP53757 342 aa3.39□□□□□ -1.87
XRN1YGL173C SQS1P53866 767 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C ATG4P53867 494 aa3.39□□□□□ -1.87
XRN1YGL173C CLU1Q03690 1277 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C SOV1Q04748 898 aa3.39□□□□□ -1.87
XRN1YGL173C VTA1Q06263 330 aa3.39□□□□□ -1.87
XRN1YGL173C RIX7Q07844 837 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C YOR223WQ12015 292 aa3.39□□□□□ -1.87
XRN1YGL173C DIF1O13577 133 aa3.39□□□□□ -1.87
XRN1YGL173C NAT1P12945 854 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C DOT6P40059 670 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C SPO1P53541 631 aa3.39□□□□□ -1.87
XRN1YGL173C YKR011CQ02209 353 aa3.39□□□□□ -1.87
XRN1YGL173C TY1A-DR2Q03964 440 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C IRC3Q06683 689 aa3.39□□□□□ -1.87
XRN1YGL173C SYT1Q06836 1226 aa3.39□□□□□ -1.87
XRN1YGL173C ELG1Q12050 791 aa3.39□□□□□ -1.87
XRN1YGL173C SAM35P14693 329 aa3.39□□□□□ -1.87
XRN1YGL173C CLB1P24868 471 aa3.39□□□□□ -1.87
XRN1YGL173C MLS1P30952 554 aa3.39□□□□□ -1.87
XRN1YGL173C UIP3P39547 235 aa3.39□□□□□ -1.87
XRN1YGL173C SEC28P40509 296 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C LYS4P49367 693 aaPredicted RBP3.39□□□□□ -1.87
XRN1YGL173C YGR045CP53229 120 aa3.39□□□□□ -1.87
XRN1YGL173C NCE103P53615 221 aa3.39□□□□□ -1.87
XRN1YGL173C PEX25Q02969 394 aa3.39□□□□□ -1.87
XRN1YGL173C PSK1P31374 1356 aa3.39□□□□□ -1.87
XRN1YGL173C RPS21AP0C0V8 87 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C AMS1P22855 1083 aa3.39□□□□□ -1.87
XRN1YGL173C SLC1P33333 303 aa3.39□□□□□ -1.87
XRN1YGL173C VID24P38263 362 aa3.39□□□□□ -1.87
XRN1YGL173C SDP1P40479 209 aa3.39□□□□□ -1.87
XRN1YGL173C VHR1P40522 640 aa3.39□□□□□ -1.87
XRN1YGL173C DOT5P40553 215 aa3.39□□□□□ -1.87
XRN1YGL173C INA22P40576 216 aa3.39□□□□□ -1.87
XRN1YGL173C BAP3P41815 604 aa3.39□□□□□ -1.87
XRN1YGL173C ARG5,6Q01217 863 aa3.39□□□□□ -1.87
XRN1YGL173C AVO1Q08236 1176 aa3.39□□□□□ -1.87
XRN1YGL173C RTC5Q12108 567 aaKnown RBP3.39□□□□□ -1.87
XRN1YGL173C PHR1P05066 565 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
XRN1YGL173C SAN1P22470 610 aa3.38□□□□□ -1.87
XRN1YGL173C GEX1P25596 615 aa3.38□□□□□ -1.87
XRN1YGL173C FAT1P38225 669 aa3.38□□□□□ -1.87
XRN1YGL173C THI6P41835 540 aa3.38□□□□□ -1.87
XRN1YGL173C LSB6P42951 607 aa3.38□□□□□ -1.87
XRN1YGL173C RMT2Q03305 412 aa3.38□□□□□ -1.87
XRN1YGL173C SEG1Q04279 960 aa3.38□□□□□ -1.87
XRN1YGL173C PSR1Q07800 427 aa3.38□□□□□ -1.87
XRN1YGL173C KEL3Q08979 651 aaPredicted RBP3.38□□□□□ -1.87
XRN1YGL173C MET32Q12041 191 aa3.38□□□□□ -1.87
XRN1YGL173C FIG2P25653 1609 aa3.38□□□□□ -1.87
XRN1YGL173C RPS17AP02407 136 aaKnown RBP3.38□□□□□ -1.87
XRN1YGL173C RAD18P10862 487 aa3.38□□□□□ -1.87
XRN1YGL173C RPS17BP14127 136 aaKnown RBP3.38□□□□□ -1.87
XRN1YGL173C SAC7P17121 654 aa3.38□□□□□ -1.87
XRN1YGL173C PRD1P25375 712 aa3.38□□□□□ -1.87
XRN1YGL173C ECM32P32644 1121 aaKnown RBP3.38□□□□□ -1.87
XRN1YGL173C TYE7P33122 291 aaPredicted RBP3.38□□□□□ -1.87
XRN1YGL173C YRO2P38079 344 aa3.38□□□□□ -1.87
XRN1YGL173C YBR259WP38338 688 aa3.38□□□□□ -1.87
XRN1YGL173C GSM1P42950 618 aa3.38□□□□□ -1.87
XRN1YGL173C CHA4P43634 648 aa3.38□□□□□ -1.87
XRN1YGL173C HST1P53685 503 aa3.38□□□□□ -1.87
XRN1YGL173C RNH1Q04740 348 aa3.38□□□□□ -1.87
XRN1YGL173C FRE5Q08908 694 aa3.38□□□□□ -1.87
XRN1YGL173C RTN2Q12443 393 aa3.38□□□□□ -1.87
XRN1YGL173C DUR1,2P32528 1835 aaKnown RBP3.38□□□□□ -1.87
XRN1YGL173C HSF1P10961 833 aa3.38□□□□□ -1.87
XRN1YGL173C SMF1P38925 575 aa3.38□□□□□ -1.87
XRN1YGL173C YIL092WP40497 633 aa3.38□□□□□ -1.87
XRN1YGL173C NAS2P40555 220 aa3.38□□□□□ -1.87
XRN1YGL173C BTN2P53286 410 aa3.38□□□□□ -1.87
XRN1YGL173C RPT4P53549 437 aaKnown RBP3.38□□□□□ -1.87
XRN1YGL173C TLG1Q03322 224 aa3.38□□□□□ -1.87
XRN1YGL173C CDA1Q06702 301 aa3.38□□□□□ -1.87
XRN1YGL173C SMF3Q12078 473 aaPredicted RBP3.38□□□□□ -1.87
XRN1YGL173C RRG1Q12167 365 aaPredicted RBP3.38□□□□□ -1.87
XRN1YGL173C YIL002W-AQ3E7Z5 69 aa3.38□□□□□ -1.87
XRN1YGL173C RSF2P46974 1380 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms