RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP3	YGL078C	HCR1	Q05775	265 aa	Known RBP	4.24	□□□□□ -1.73
DBP3	YGL078C	YLR177W	Q06251	628 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	ATG17	Q06410	417 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	TSR2	Q06672	205 aa	Known RBP	4.24	□□□□□ -1.73
DBP3	YGL078C	VAM6	Q07468	1049 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	PSR1	Q07800	427 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	TAF10	Q12030	206 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	MSH5	Q12175	901 aa		4.24	□□□□□ -1.73
DBP3	YGL078C	CAD1	P24813	409 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	MEF1	P25039	761 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	SRB4	P32569	687 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	GRX4	P32642	244 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	RPC34	P32910	317 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
DBP3	YGL078C	RFT1	P38206	574 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	YHL017W	P38745	532 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	YLF2	P38746	405 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	RPN10	P38886	268 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	SPC72	P39723	622 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	MAM1	P40065	302 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	SCS2	P40075	244 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	FMS1	P50264	508 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	COP1	P53622	1201 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	HFD1	Q04458	532 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	ESC8	Q08119	714 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	GPN2	Q08726	347 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	GUP2	Q08929	609 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	SWM1	Q12379	170 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	DUR1,2	P32528	1835 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	REP1	P03871	373 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	YJU2	P28320	278 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	GCD7	P32502	381 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	STE14	P32584	239 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	KDX1	P36005	433 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	MAL33	P38157	468 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	EFM2	P38347	419 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	REV7	P38927	245 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	CAF16	P43569	289 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	TY4A-J	P47023	414 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	TMA22	P47089	198 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	BRO1	P48582	844 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	BOP3	P53958	396 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	YDR341C	Q05506	607 aa	Known RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	FUS2	Q05670	677 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	CRR1	Q05790	422 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	YLH47	Q06493	454 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	DNL4	Q08387	944 aa	Predicted RBP	4.23	□□□□□ -1.73
DBP3	YGL078C	YBR182C-A	Q8TGU6	64 aa		4.23	□□□□□ -1.73
DBP3	YGL078C	YPR089W	O13585	888 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	RPL22A	P05749	121 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	SRD1	P09007	221 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	ADH4	P10127	382 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	PRP4	P20053	465 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	ITR2	P30606	609 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	SIN4	P32259	974 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	MCD4	P36051	919 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	DBP7	P36120	742 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	AAP1	P37898	856 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	PSY4	P38193	441 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	FZO1	P38297	855 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	SMF1	P38925	575 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	PZF1	P39933	429 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	TIF4631	P39935	952 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	MET18	P40469	1032 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	LAM5	P43560	674 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	VTC2	P43585	828 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	SSY5	P47002	699 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	EXG2	P52911	562 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	PCL10	P53124	433 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	SQS1	P53866	767 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	SNP1	Q00916	300 aa	Predicted RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	GFD1	Q04839	188 aa	Known RBP	4.22	□□□□□ -1.73
DBP3	YGL078C	RIM20	Q12033	661 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	SCM3	Q12334	223 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	APC2	Q12440	853 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	RMP1	Q12530	201 aa		4.22	□□□□□ -1.73
DBP3	YGL078C	NUP188	P52593	1655 aa	Known RBP	4.21	□□□□□ -1.73
DBP3	YGL078C	LPD1	P09624	499 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	RAD18	P10862	487 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	ADE2	P21264	571 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	KAR4	P25583	335 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	CTS1	P29029	562 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	NGG1	P32494	702 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	SSE1	P32589	693 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	KES1	P35844	434 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	YKL222C	P35995	705 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	SHM2	P37291	469 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	SAK1	P38990	1142 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	STB2	P46679	850 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	FYV8	P46949	817 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	NOP9	P47077	666 aa	Known RBP	4.21	□□□□□ -1.74
DBP3	YGL078C	HXT16	P47185	567 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	THI21	Q08975	551 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	DCS2	Q12123	353 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	GPR1	Q12361	961 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	RTP1	Q12751	981 aa		4.21	□□□□□ -1.74
DBP3	YGL078C	PET494	P07390	489 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 113.5 ms