RNA–Protein interactions for RNA: YER032W

FIR1, Transcript of Protein involved in 3' mRNA processing, yeast

Gene FIR1, Length 2,631 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIR1	YER032W	GRR1	P24814	1151 aa		2.74	□□□□□ -1.97
FIR1	YER032W	EFT1	P32324	842 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	MRP20	P32387	263 aa		2.74	□□□□□ -1.97
FIR1	YER032W	FRD1	P32614	470 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	SRO77	P38163	1010 aa		2.74	□□□□□ -1.97
FIR1	YER032W	LYS9	P38999	446 aa		2.74	□□□□□ -1.97
FIR1	YER032W	PSD1	P39006	500 aa		2.74	□□□□□ -1.97
FIR1	YER032W	CAB2	P40506	365 aa		2.74	□□□□□ -1.97
FIR1	YER032W	LAM5	P43560	674 aa		2.74	□□□□□ -1.97
FIR1	YER032W	BST1	P43571	1029 aa		2.74	□□□□□ -1.97
FIR1	YER032W	AIP1	P46680	615 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	TEL2	P53038	688 aa		2.74	□□□□□ -1.97
FIR1	YER032W	PUS2	P53167	370 aa		2.74	□□□□□ -1.97
FIR1	YER032W	YGR045C	P53229	120 aa		2.74	□□□□□ -1.97
FIR1	YER032W	RRN5	Q02983	363 aa		2.74	□□□□□ -1.97
FIR1	YER032W	NGL3	Q03210	505 aa		2.74	□□□□□ -1.97
FIR1	YER032W	YMR074C	Q04773	145 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SPH1	Q06160	661 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SKG3	Q06315	1026 aa		2.74	□□□□□ -1.97
FIR1	YER032W	CRD1	Q07560	283 aa		2.74	□□□□□ -1.97
FIR1	YER032W	ENT4	Q07872	247 aa		2.74	□□□□□ -1.97
FIR1	YER032W	BMS1	Q08965	1183 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	HOS1	Q12214	470 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SEC39	Q12745	709 aa		2.74	□□□□□ -1.97
FIR1	YER032W	OM45	P16547	393 aa		2.74	□□□□□ -1.97
FIR1	YER032W	HNM1	P19807	563 aa		2.74	□□□□□ -1.97
FIR1	YER032W	YCK1	P23291	538 aa		2.74	□□□□□ -1.97
FIR1	YER032W	PHO84	P25297	587 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	CAP1	P28495	268 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	YEL043W	P32618	956 aa		2.74	□□□□□ -1.97
FIR1	YER032W	VPS17	P32913	551 aa		2.74	□□□□□ -1.97
FIR1	YER032W	UBP11	P36026	717 aa		2.74	□□□□□ -1.97
FIR1	YER032W	MIC60	P36112	540 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SMF1	P38925	575 aa		2.74	□□□□□ -1.97
FIR1	YER032W	PFK26	P40433	827 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	RRT14	P40470	206 aa		2.74	□□□□□ -1.97
FIR1	YER032W	EFM4	P40516	257 aa		2.74	□□□□□ -1.97
FIR1	YER032W	IST3	P40565	148 aa	Predicted RBP	2.74	□□□□□ -1.97
FIR1	YER032W	MKT1	P40850	830 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	BRE2	P43132	505 aa		2.74	□□□□□ -1.97
FIR1	YER032W	YFL054C	P43549	646 aa		2.74	□□□□□ -1.97
FIR1	YER032W	AGX1	P43567	385 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SNF12	P53628	566 aa		2.74	□□□□□ -1.97
FIR1	YER032W	YAP6	Q03935	383 aa		2.74	□□□□□ -1.97
FIR1	YER032W	RAD30	Q04049	632 aa		2.74	□□□□□ -1.97
FIR1	YER032W	MGR3	Q04472	501 aa		2.74	□□□□□ -1.97
FIR1	YER032W	RCO1	Q04779	684 aa		2.74	□□□□□ -1.97
FIR1	YER032W	ECM22	Q05958	814 aa	Predicted RBP	2.74	□□□□□ -1.97
FIR1	YER032W	LUC7	Q07508	261 aa	Predicted RBP	2.74	□□□□□ -1.97
FIR1	YER032W	RIM20	Q12033	661 aa		2.74	□□□□□ -1.97
FIR1	YER032W	SPE3	Q12074	293 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	RTC5	Q12108	567 aa	Known RBP	2.74	□□□□□ -1.97
FIR1	YER032W	GPM3	Q12326	303 aa		2.74	□□□□□ -1.97
FIR1	YER032W	ATG11	Q12527	1178 aa		2.74	□□□□□ -1.97
FIR1	YER032W	RPB2	P08518	1224 aa	Known RBP	2.73	□□□□□ -1.97
FIR1	YER032W	KAR3	P17119	729 aa		2.73	□□□□□ -1.97
FIR1	YER032W	SDH2	P21801	266 aa		2.73	□□□□□ -1.97
FIR1	YER032W	ARP2	P32381	391 aa	Known RBP	2.73	□□□□□ -1.97
FIR1	YER032W	TYE7	P33122	291 aa	Predicted RBP	2.73	□□□□□ -1.97
FIR1	YER032W	DAD2	P36162	133 aa		2.73	□□□□□ -1.97
FIR1	YER032W	AKL1	P38080	1108 aa	Known RBP	2.73	□□□□□ -1.97
FIR1	YER032W	HSM3	P38348	480 aa		2.73	□□□□□ -1.97
FIR1	YER032W	MEF2	P39677	819 aa		2.73	□□□□□ -1.97
FIR1	YER032W	FMP10	P40098	244 aa		2.73	□□□□□ -1.97
FIR1	YER032W	OSW5	P40219	148 aa		2.73	□□□□□ -1.97
FIR1	YER032W	YJL045W	P47052	634 aa		2.73	□□□□□ -1.97
FIR1	YER032W	NUP84	P52891	726 aa		2.73	□□□□□ -1.97
FIR1	YER032W	MTC3	P53077	123 aa		2.73	□□□□□ -1.97
FIR1	YER032W	COG1	P53079	417 aa		2.73	□□□□□ -1.97
FIR1	YER032W	SQS1	P53866	767 aa	Known RBP	2.73	□□□□□ -1.97
FIR1	YER032W	HDA1	P53973	706 aa		2.73	□□□□□ -1.97
FIR1	YER032W	YKR011C	Q02209	353 aa		2.73	□□□□□ -1.97
FIR1	YER032W	VTC3	Q02725	835 aa		2.73	□□□□□ -1.97
FIR1	YER032W	ATG21	Q02887	496 aa		2.73	□□□□□ -1.97
FIR1	YER032W	YLR456W	Q06199	204 aa		2.73	□□□□□ -1.97
FIR1	YER032W	PCH2	P38126	564 aa		2.73	□□□□□ -1.97
FIR1	YER032W	REG2	P38232	338 aa		2.73	□□□□□ -1.97
FIR1	YER032W	MSC7	P38694	644 aa		2.73	□□□□□ -1.97
FIR1	YER032W	YHR097C	P38809	366 aa	Known RBP	2.73	□□□□□ -1.97
FIR1	YER032W	MET18	P40469	1032 aa		2.73	□□□□□ -1.97
FIR1	YER032W	NAS2	P40555	220 aa		2.73	□□□□□ -1.97
FIR1	YER032W	EXG2	P52911	562 aa		2.73	□□□□□ -1.97
FIR1	YER032W	TNA1	P53322	534 aa		2.73	□□□□□ -1.97
FIR1	YER032W	RIA1	P53893	1110 aa		2.73	□□□□□ -1.97
FIR1	YER032W	ARP5	P53946	755 aa		2.73	□□□□□ -1.97
FIR1	YER032W	YPS7	Q06325	596 aa		2.73	□□□□□ -1.97
FIR1	YER032W	MET32	Q12041	191 aa		2.73	□□□□□ -1.97
FIR1	YER032W	PSY3	Q12318	242 aa		2.73	□□□□□ -1.97
FIR1	YER032W	TY2A-LR1	P0C2J4	438 aa		2.72	□□□□□ -1.97
FIR1	YER032W	TY2A-F	P0CX61	438 aa		2.72	□□□□□ -1.97
FIR1	YER032W	TY2A-GR2	P0CX62	438 aa		2.72	□□□□□ -1.97
FIR1	YER032W	RNA1	P11745	407 aa	Known RBP	2.72	□□□□□ -1.97
FIR1	YER032W	STE12	P13574	688 aa		2.72	□□□□□ -1.97
FIR1	YER032W	RRP43	P25359	394 aa	Predicted RBP	2.72	□□□□□ -1.97
FIR1	YER032W	TY2A-C	P25383	438 aa		2.72	□□□□□ -1.97
FIR1	YER032W	CWH43	P25618	953 aa		2.72	□□□□□ -1.97
FIR1	YER032W	YCR051W	P25631	222 aa		2.72	□□□□□ -1.97
FIR1	YER032W	NTG1	P31378	399 aa		2.72	□□□□□ -1.97
FIR1	YER032W	SUR1	P33300	382 aa		2.72	□□□□□ -1.97
FIR1	YER032W	APN2	P38207	520 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms