RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MRC1P25588 1096 aa3.12□□□□□ -1.91
SMB1YER029C DSS4P32601 143 aa3.12□□□□□ -1.91
SMB1YER029C LOT5P34234 306 aa3.12□□□□□ -1.91
SMB1YER029C EMP65P40085 556 aa3.12□□□□□ -1.91
SMB1YER029C PUS4P48567 403 aaKnown RBP3.12□□□□□ -1.91
SMB1YER029C SLD3P53135 668 aa3.12□□□□□ -1.91
SMB1YER029C GIS2P53849 153 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91 RIP-Chip
SMB1YER029C FRE7Q12333 620 aa3.12□□□□□ -1.91
SMB1YER029C SEC3P33332 1336 aaKnown RBP3.12□□□□□ -1.91
SMB1YER029C NOP1P15646 327 aaKnown RBP3.11□□□□□ -1.91
SMB1YER029C YJU2P28320 278 aaPredicted RBP3.11□□□□□ -1.91
SMB1YER029C SSP120P39931 234 aaKnown RBP3.11□□□□□ -1.91
SMB1YER029C STL1P39932 569 aa3.11□□□□□ -1.91
SMB1YER029C TDA10P42938 290 aa3.11□□□□□ -1.91
SMB1YER029C BST1P43571 1029 aa3.11□□□□□ -1.91
SMB1YER029C PHM6Q05637 104 aa3.11□□□□□ -1.91
SMB1YER029C Q0010Q9ZZX9 128 aa3.11□□□□□ -1.91
SMB1YER029C AAC1P04710 309 aa3.1□□□□□ -1.91
SMB1YER029C HEM1P09950 548 aaPredicted RBP3.1□□□□□ -1.91
SMB1YER029C SSB1P11484 613 aaKnown RBP3.1□□□□□ -1.91
SMB1YER029C GSY2P27472 705 aa3.1□□□□□ -1.91
SMB1YER029C CDC5P32562 705 aa3.1□□□□□ -1.91
SMB1YER029C SSB2P40150 613 aaKnown RBP3.1□□□□□ -1.91
SMB1YER029C PSA1P41940 361 aaKnown RBP3.1□□□□□ -1.91
SMB1YER029C PEX14P53112 341 aa3.1□□□□□ -1.91
SMB1YER029C HOL1P53389 586 aa3.1□□□□□ -1.91
SMB1YER029C TGS1Q12052 315 aa3.1□□□□□ -1.91
SMB1YER029C PSF3Q12146 194 aa3.1□□□□□ -1.91
SMB1YER029C YMR084WA2P2R3 262 aa3.09□□□□□ -1.91
SMB1YER029C KAR1P11927 433 aa3.09□□□□□ -1.91
SMB1YER029C CBP3P21560 335 aa3.09□□□□□ -1.91
SMB1YER029C PET309P32522 965 aaPredicted RBP3.09□□□□□ -1.91
SMB1YER029C RPC34P32910 317 aa3.09□□□□□ -1.91
SMB1YER029C SDH8P38345 138 aa3.09□□□□□ -1.91
SMB1YER029C YIL092WP40497 633 aa3.09□□□□□ -1.91
SMB1YER029C GSM1P42950 618 aa3.09□□□□□ -1.91
SMB1YER029C IRC8P47046 822 aa3.09□□□□□ -1.91
SMB1YER029C COS12P53053 380 aa3.09□□□□□ -1.91
SMB1YER029C FOL1P53848 824 aa3.09□□□□□ -1.91
SMB1YER029C YNL034WP53963 612 aa3.09□□□□□ -1.91
SMB1YER029C TGL2P54857 326 aa3.09□□□□□ -1.91
SMB1YER029C DBP10Q12389 995 aaKnown RBP3.09□□□□□ -1.91
SMB1YER029C STB5P38699 743 aa3.08□□□□□ -1.92
SMB1YER029C EXO1P39875 702 aa3.08□□□□□ -1.92
SMB1YER029C IMA5P40884 581 aa3.08□□□□□ -1.92
SMB1YER029C SAE2P46946 345 aa3.08□□□□□ -1.92
SMB1YER029C YLR111WQ12528 110 aa3.08□□□□□ -1.92
SMB1YER029C SEC12P11655 471 aa3.07□□□□□ -1.92
SMB1YER029C YPK1P12688 680 aaKnown RBP3.07□□□□□ -1.92
SMB1YER029C AMD2P22580 549 aa3.07□□□□□ -1.92
SMB1YER029C PHO3P24031 467 aa3.07□□□□□ -1.92
SMB1YER029C GDA1P32621 518 aa3.07□□□□□ -1.92
SMB1YER029C VPS8P39702 1274 aa3.07□□□□□ -1.92
SMB1YER029C YJL043WP47053 257 aa3.07□□□□□ -1.92
SMB1YER029C CNM67P53865 581 aaKnown RBP3.07□□□□□ -1.92
SMB1YER029C CEG1Q01159 459 aaPredicted RBP3.07□□□□□ -1.92
SMB1YER029C TRS31Q03337 283 aa3.07□□□□□ -1.92
SMB1YER029C WAR1Q03631 944 aa3.07□□□□□ -1.92
SMB1YER029C GFD1Q04839 188 aaKnown RBP3.07□□□□□ -1.92
SMB1YER029C TRI1Q05024 226 aa3.07□□□□□ -1.92
SMB1YER029C HRD3Q05787 833 aa3.07□□□□□ -1.92
SMB1YER029C SPN1Q06505 410 aaPredicted RBP3.07□□□□□ -1.92
SMB1YER029C BSP1Q06604 576 aa3.07□□□□□ -1.92
SMB1YER029C CRT10Q08226 957 aa3.07□□□□□ -1.92
SMB1YER029C HOS1Q12214 470 aa3.07□□□□□ -1.92
SMB1YER029C ADH4P10127 382 aa3.06□□□□□ -1.92
SMB1YER029C BET2P20133 325 aa3.06□□□□□ -1.92
SMB1YER029C YCR061WP25639 631 aa3.06□□□□□ -1.92
SMB1YER029C ECM32P32644 1121 aaKnown RBP3.06□□□□□ -1.92
SMB1YER029C TGL1P34163 548 aa3.06□□□□□ -1.92
SMB1YER029C SCS2P40075 244 aaKnown RBP3.06□□□□□ -1.92
SMB1YER029C OPT1P40897 799 aa3.06□□□□□ -1.92
SMB1YER029C MDR1P53258 950 aa3.06□□□□□ -1.92
SMB1YER029C YML119WQ03208 357 aa3.06□□□□□ -1.92
SMB1YER029C RAD33Q04231 177 aa3.06□□□□□ -1.92
SMB1YER029C ENT2Q05785 613 aa3.06□□□□□ -1.92
SMB1YER029C CYK3Q07533 885 aa3.06□□□□□ -1.92
SMB1YER029C NEW1Q08972 1196 aaKnown RBP3.06□□□□□ -1.92
SMB1YER029C NUR1Q12066 484 aa3.06□□□□□ -1.92
SMB1YER029C RDL1Q12305 139 aaKnown RBP3.06□□□□□ -1.92
SMB1YER029C CHO2P05374 869 aaKnown RBP3.05□□□□□ -1.92
SMB1YER029C RRP43P25359 394 aaPredicted RBP3.05□□□□□ -1.92
SMB1YER029C PRE2P30656 287 aaKnown RBP3.05□□□□□ -1.92
SMB1YER029C BEM3P32873 1128 aa3.05□□□□□ -1.92
SMB1YER029C YLF2P38746 405 aa3.05□□□□□ -1.92
SMB1YER029C ARO9P38840 513 aaPredicted RBP3.05□□□□□ -1.92
SMB1YER029C POL31P46957 487 aa3.05□□□□□ -1.92
SMB1YER029C ACS1Q01574 713 aa3.05□□□□□ -1.92
SMB1YER029C RSC9Q03124 581 aa3.05□□□□□ -1.92
SMB1YER029C LCB4Q12246 624 aa3.05□□□□□ -1.92
SMB1YER029C AHA1Q12449 350 aaKnown RBP3.05□□□□□ -1.92
SMB1YER029C VAS1P07806 1104 aaKnown RBP3.04□□□□□ -1.92
SMB1YER029C FRD1P32614 470 aaKnown RBP3.04□□□□□ -1.92
SMB1YER029C APD1P38281 316 aa3.04□□□□□ -1.92
SMB1YER029C ATP23P53722 227 aa3.04□□□□□ -1.92
SMB1YER029C ORM2Q06144 216 aa3.04□□□□□ -1.92
SMB1YER029C MAK32P23060 363 aa3.03□□□□□ -1.92
SMB1YER029C MRPL9P31334 269 aa3.03□□□□□ -1.92
SMB1YER029C SWD1P39706 426 aa3.03□□□□□ -1.92
SMB1YER029C NMD5P46970 1048 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms