RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TY1B-DR1Q03855 1755 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-DR3Q07791 1770 aaKnown RBP3.31□□□□□ -1.88
SSF2YDR312W RTK1Q12100 620 aaPredicted RBP3.31□□□□□ -1.88
SSF2YDR312W TY2B-OR1Q12113 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-DR1Q12472 1770 aa3.31□□□□□ -1.88
SSF2YDR312W TY2B-OR2Q12501 1770 aa3.31□□□□□ -1.88
SSF2YDR312W NUP170P38181 1502 aa3.3□□□□□ -1.88
SSF2YDR312W NUP1P20676 1076 aa3.3□□□□□ -1.88
SSF2YDR312W AAD3P25612 363 aa3.3□□□□□ -1.88
SSF2YDR312W TMT1P32643 299 aa3.3□□□□□ -1.88
SSF2YDR312W PIH1P38768 344 aa3.3□□□□□ -1.88
SSF2YDR312W YEL025CP39991 1188 aa3.3□□□□□ -1.88
SSF2YDR312W LTP1P40347 161 aa3.3□□□□□ -1.88
SSF2YDR312W GLO1P50107 326 aa3.3□□□□□ -1.88
SSF2YDR312W MNT2P53059 558 aa3.3□□□□□ -1.88
SSF2YDR312W HOL1P53389 586 aa3.3□□□□□ -1.88
SSF2YDR312W CEF1Q03654 590 aaPredicted RBP3.3□□□□□ -1.88
SSF2YDR312W SND1Q04007 877 aa3.3□□□□□ -1.88
SSF2YDR312W YAP7Q08182 245 aa3.3□□□□□ -1.88
SSF2YDR312W SLX4Q12098 748 aa3.3□□□□□ -1.88
SSF2YDR312W VPS5Q92331 675 aa3.3□□□□□ -1.88
SSF2YDR312W LEU2P04173 364 aaPredicted RBP3.29□□□□□ -1.88
SSF2YDR312W APN1P22936 367 aa3.29□□□□□ -1.88
SSF2YDR312W PTP1P25044 335 aa3.29□□□□□ -1.88
SSF2YDR312W CWH43P25618 953 aa3.29□□□□□ -1.88
SSF2YDR312W HOT13P36078 116 aa3.29□□□□□ -1.88
SSF2YDR312W RIM4P38741 713 aa3.29□□□□□ -1.88
SSF2YDR312W STL1P39932 569 aa3.29□□□□□ -1.88
SSF2YDR312W YIL092WP40497 633 aa3.29□□□□□ -1.88
SSF2YDR312W MAD2P40958 196 aa3.29□□□□□ -1.88
SSF2YDR312W YIP4P53093 235 aa3.29□□□□□ -1.88
SSF2YDR312W PEX8P53248 589 aa3.29□□□□□ -1.88
SSF2YDR312W MFM1Q02783 413 aa3.29□□□□□ -1.88
SSF2YDR312W DIN7Q12086 430 aa3.29□□□□□ -1.88
SSF2YDR312W ZPS1Q12512 249 aa3.29□□□□□ -1.88
SSF2YDR312W AI5_ALPHAQ9ZZX1 630 aa3.29□□□□□ -1.88
SSF2YDR312W SPP41P38904 1435 aa3.29□□□□□ -1.88
SSF2YDR312W SNT2P53127 1403 aa3.29□□□□□ -1.88
SSF2YDR312W PCK1P10963 549 aa3.28□□□□□ -1.88
SSF2YDR312W PMA2P19657 947 aa3.28□□□□□ -1.88
SSF2YDR312W HOP1P20050 605 aa3.28□□□□□ -1.88
SSF2YDR312W VPS33P20795 691 aa3.28□□□□□ -1.88
SSF2YDR312W ARG1P22768 420 aa3.28□□□□□ -1.88
SSF2YDR312W MBR1P23493 339 aa3.28□□□□□ -1.88
SSF2YDR312W CNE1P27825 502 aa3.28□□□□□ -1.88
SSF2YDR312W DHR2P36009 735 aaPredicted RBP3.28□□□□□ -1.88
SSF2YDR312W YJL193WP39542 402 aa3.28□□□□□ -1.88
SSF2YDR312W XBP1P40489 647 aa3.28□□□□□ -1.88
SSF2YDR312W MDR1P53258 950 aa3.28□□□□□ -1.88
SSF2YDR312W MPD2Q99316 277 aa3.28□□□□□ -1.88
SSF2YDR312W TSC11P40061 1430 aa3.28□□□□□ -1.88
SSF2YDR312W TUF1P02992 437 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W URA3P03962 267 aa3.27□□□□□ -1.89
SSF2YDR312W CPA2P03965 1118 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W NET1P47035 1189 aa3.27□□□□□ -1.89
SSF2YDR312W PIP2P52960 996 aa3.27□□□□□ -1.89
SSF2YDR312W BUD17P53727 317 aa3.27□□□□□ -1.89
SSF2YDR312W YNR071CP53757 342 aa3.27□□□□□ -1.89
SSF2YDR312W SEC5P89102 971 aa3.27□□□□□ -1.89
SSF2YDR312W RPS15Q01855 142 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W MAK10Q02197 733 aa3.27□□□□□ -1.89
SSF2YDR312W YDL073WQ07454 984 aa3.27□□□□□ -1.89
SSF2YDR312W YPL216WQ08964 1102 aa3.27□□□□□ -1.89
SSF2YDR312W NUR1Q12066 484 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-HO13535 1793 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-DR5P0C2I2 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-DR6P0C2I3 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-LR2P0C2I5 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-LR3P0C2I6 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W TY1B-PR1P0C2I9 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W TY1B-PR2P0C2J0 1756 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-PR3P0C2J1 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W TY1B-JR1P47098 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-ML2Q03434 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W TY1B-ER1Q03612 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-ML1Q04711 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W TY1B-GR2Q12269 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-OLQ12273 1755 aa3.27□□□□□ -1.89
SSF2YDR312W TY1B-PLQ12414 1755 aaKnown RBP3.27□□□□□ -1.89
SSF2YDR312W RPL7AP05737 244 aaKnown RBP3.26□□□□□ -1.89
SSF2YDR312W CAP1P28495 268 aaKnown RBP3.26□□□□□ -1.89
SSF2YDR312W SCS2P40075 244 aaKnown RBP3.26□□□□□ -1.89
SSF2YDR312W ATG36P46983 293 aa3.26□□□□□ -1.89
SSF2YDR312W COQ6P53318 479 aa3.26□□□□□ -1.89
SSF2YDR312W RPL7BQ12213 244 aaKnown RBP3.26□□□□□ -1.89
SSF2YDR312W HOS1Q12214 470 aa3.26□□□□□ -1.89
SSF2YDR312W NTE1Q04958 1679 aa3.26□□□□□ -1.89
SSF2YDR312W PDR15Q04182 1529 aaKnown RBP3.26□□□□□ -1.89
SSF2YDR312W WHI2P12611 486 aa3.25□□□□□ -1.89
SSF2YDR312W PHO3P24031 467 aa3.25□□□□□ -1.89
SSF2YDR312W PET309P32522 965 aaPredicted RBP3.25□□□□□ -1.89
SSF2YDR312W DSS4P32601 143 aa3.25□□□□□ -1.89
SSF2YDR312W GRX7P38068 203 aa3.25□□□□□ -1.89
SSF2YDR312W YAP3P38749 330 aa3.25□□□□□ -1.89
SSF2YDR312W GAT1P43574 510 aa3.25□□□□□ -1.89
SSF2YDR312W CNM67P53865 581 aaKnown RBP3.25□□□□□ -1.89
SSF2YDR312W USA1Q03714 838 aa3.25□□□□□ -1.89
SSF2YDR312W PSF3Q12146 194 aa3.25□□□□□ -1.89
SSF2YDR312W DBP10Q12389 995 aaKnown RBP3.25□□□□□ -1.89
SSF2YDR312W TMA7Q3E764 64 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms