RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	HSP82	P02829	709 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	RPL40A	P0CH08	128 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	RPL40B	P0CH09	128 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	HMG1	P12683	1054 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	AEP2	P22136	580 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	PDE1	P22434	369 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	HCM1	P25364	564 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	MRS6	P32864	603 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	SKG6	P32900	734 aa	Predicted RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	NIC96	P34077	839 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	STO1	P34160	861 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	MPE1	P35728	441 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	TRZ1	P36159	838 aa	Predicted RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	KTR4	P38131	464 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	CKB2	P38930	258 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	NIT2	P47016	307 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	TY4A-J	P47023	414 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	CTF18	P49956	741 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	ORC5	P50874	479 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	TAM41	P53230	385 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	YGR283C	P53336	341 aa	Predicted RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	CBK1	P53894	756 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	SLG1	P54867	378 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	LEE1	Q02799	301 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	SRP1	Q02821	542 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	SNU56	Q03782	492 aa	Known RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	SHS1	Q07657	551 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	AVO1	Q08236	1176 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	YTM1	Q12024	460 aa	Predicted RBP	4.54	□□□□□ -1.68
DPB4	YDR121W	OSW2	Q12202	724 aa		4.54	□□□□□ -1.68
DPB4	YDR121W	RPS14A	P06367	137 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	HIS5	P07172	385 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	FRS2	P15625	503 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	ALG1	P16661	449 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	PFK1	P16861	987 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	NAR1	P23503	491 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	SGF29	P25554	259 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	PEX34	P25584	144 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	PRR1	P28708	518 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	KIP1	P28742	1111 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	CYS3	P31373	394 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	YSC83	P32792	385 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	REC104	P33323	182 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	ALG14	P38242	237 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	YHL017W	P38745	532 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	QNS1	P38795	714 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	RPS14B	P39516	138 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	CAF16	P43569	289 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	DUG1	P43616	481 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	YGR130C	P53278	816 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	ELA1	P53861	379 aa	Predicted RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	ADA2	Q02336	434 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	VTC3	Q02725	835 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	CWC21	Q03375	135 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	NSE5	Q03718	556 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	YHM2	Q04013	314 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	HRQ1	Q05549	1077 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	RSA3	Q05942	220 aa	Known RBP	4.53	□□□□□ -1.68
DPB4	YDR121W	APM4	Q99186	491 aa		4.53	□□□□□ -1.68
DPB4	YDR121W	APA1	P16550	321 aa	Known RBP	4.52	□□□□□ -1.69
DPB4	YDR121W	RPC53	P25441	422 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	PTP2	P29461	750 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	NAM7	P30771	971 aa	Known RBP	4.52	□□□□□ -1.69
DPB4	YDR121W	PRO1	P32264	428 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	HOG1	P32485	435 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	RPN12	P32496	274 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	VPH1	P32563	840 aa	Known RBP	4.52	□□□□□ -1.69
DPB4	YDR121W	EMC3	P36039	253 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	MNN4	P36044	1178 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	MMS4	P38257	691 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	HSE1	P38753	452 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	TED1	P40533	473 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	LEM3	P42838	414 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	YGR045C	P53229	120 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	TOF1	P53840	1238 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	STP1	Q00947	519 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	EIS1	Q05050	843 aa	Known RBP	4.52	□□□□□ -1.69
DPB4	YDR121W	ENT2	Q05785	613 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	ATG33	Q06485	197 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	YDL057W	Q07379	328 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	PEX19	Q07418	342 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	NSE1	Q07913	336 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	ENV7	Q12003	364 aa		4.52	□□□□□ -1.69
DPB4	YDR121W	MSB2	P32334	1306 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	GAL80	P04387	435 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	ERS1	P17261	260 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	CKA2	P19454	339 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	ECM32	P32644	1121 aa	Known RBP	4.51	□□□□□ -1.69
DPB4	YDR121W	TRM2	P33753	639 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	YKL151C	P36059	337 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	POL12	P38121	705 aa	Predicted RBP	4.51	□□□□□ -1.69
DPB4	YDR121W	DUG2	P38149	878 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	EXO84	P38261	753 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	SIF2	P38262	535 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	NMD3	P38861	518 aa	Known RBP	4.51	□□□□□ -1.69
DPB4	YDR121W	UBP5	P39944	805 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	GZF3	P42944	551 aa	Known RBP	4.51	□□□□□ -1.69
DPB4	YDR121W	YFL054C	P43549	646 aa		4.51	□□□□□ -1.69
DPB4	YDR121W	CCM1	P48237	864 aa	Predicted RBP	4.51	□□□□□ -1.69
DPB4	YDR121W	ASN1	P49089	572 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms