RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM12	YDR047W	YLR053C	Q12026	108 aa		11.16	□□□□□ -0.62
HEM12	YDR047W	HRT3	Q12347	344 aa		11.16	□□□□□ -0.62
HEM12	YDR047W	APM4	Q99186	491 aa		11.16	□□□□□ -0.62
HEM12	YDR047W	MSD1	P15179	658 aa	Known RBP	11.15	□□□□□ -0.62
HEM12	YDR047W	YIH1	P25637	258 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	ADK2	P26364	225 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	URA10	P30402	227 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	GRS1	P38088	690 aa	Known RBP	11.15	□□□□□ -0.62
HEM12	YDR047W	RIM4	P38741	713 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	PPE1	P38796	400 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	LAM1	P38851	1228 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	TFG1	P41895	735 aa	Predicted RBP	11.15	□□□□□ -0.62
HEM12	YDR047W	MAF1	P41910	395 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	YJL132W	P47014	750 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	TAF6	P53040	516 aa		11.15	□□□□□ -0.62
HEM12	YDR047W	SUB1	P54000	292 aa	Known RBP	11.15	□□□□□ -0.62
HEM12	YDR047W	ATP1	P07251	545 aa	Known RBP	11.14	□□□□□ -0.63
HEM12	YDR047W	DSS4	P32601	143 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	PEX5	P35056	612 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	YAT2	P40017	923 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	FOL2	P51601	243 aa	Known RBP	11.14	□□□□□ -0.63
HEM12	YDR047W	NUT1	P53114	1132 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	BIO4	P53630	237 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	MTD1	Q02046	320 aa	Known RBP	11.14	□□□□□ -0.63
HEM12	YDR047W	SPP1	Q03012	353 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	ADI1	Q03677	179 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	ARA2	Q04212	335 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	GRX8	Q05926	109 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	PMT7	Q06644	662 aa		11.14	□□□□□ -0.63
HEM12	YDR047W	LEA1	Q08963	238 aa	Predicted RBP	11.14	□□□□□ -0.63
HEM12	YDR047W	MET16	P18408	261 aa	Predicted RBP	11.13	□□□□□ -0.63
HEM12	YDR047W	PMI40	P29952	429 aa	Known RBP	11.13	□□□□□ -0.63
HEM12	YDR047W	PEP7	P32609	515 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	UTR2	P32623	467 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	AIM26	P32858	118 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	HSP78	P33416	811 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	YBR056W	P38081	501 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	HSM3	P38348	480 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	ATM1	P40416	690 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	OPT1	P40897	799 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	EMW1	P42842	904 aa	Known RBP	11.13	□□□□□ -0.63
HEM12	YDR047W	YJL107C	P42947	387 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	BUD22	Q04347	519 aa	Known RBP	11.13	□□□□□ -0.63
HEM12	YDR047W	YML083C	Q04526	418 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	YDR338C	Q05497	695 aa		11.13	□□□□□ -0.63
HEM12	YDR047W	PMR1	P13586	950 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	AMS1	P22855	1083 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	GID7	P25569	745 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	MRE11	P32829	692 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	OAF1	P39720	1047 aa	Predicted RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	SSP120	P39931	234 aa	Known RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	YEL028W	P39989	153 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	DPH1	P40487	425 aa	Known RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	RPS10B	P46784	105 aa	Known RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	VPS25	P47142	202 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	TEP1	P53916	434 aa		11.12	□□□□□ -0.63
HEM12	YDR047W	SLU7	Q02775	382 aa	Known RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	RPS10A	Q08745	105 aa	Predicted RBP	11.12	□□□□□ -0.63
HEM12	YDR047W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	11.12	□□□□□ -0.63	not detected
HEM12	YDR047W	HIS1	P00498	297 aa	Known RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	HSP60	P19882	572 aa	Known RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	BAS1	P22035	811 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	ARG1	P22768	420 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	AAD3	P25612	363 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	HEM12	P32347	362 aa	Predicted RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	COY1	P34237	679 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	EDC3	P39998	551 aa	Known RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	PFK26	P40433	827 aa	Known RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	YFL012W	P43580	148 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	UBX4	P54730	416 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	CEG1	Q01159	459 aa	Predicted RBP	11.11	□□□□□ -0.63
HEM12	YDR047W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	11.11	□□□□□ -0.63	not detected
HEM12	YDR047W	SLP1	Q12232	587 aa		11.11	□□□□□ -0.63
HEM12	YDR047W	PRP4	P20053	465 aa	Known RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	ADY2	P25613	283 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	FUI1	P38196	639 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	SIF2	P38262	535 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	YFL040W	P43562	540 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	PAN2	P53010	1115 aa	Predicted RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	COP1	P53622	1201 aa	Known RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	HST2	P53686	357 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	YNL144C	P53907	740 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	ENT5	Q03769	411 aa	Known RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	SPC24	Q04477	213 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	ARP9	Q05123	467 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	ECM22	Q05958	814 aa	Predicted RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	MRI1	Q06489	411 aa	Known RBP	11.1	□□□□□ -0.63
HEM12	YDR047W	SAM3	Q08986	587 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	SVS1	Q12254	260 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	SPE4	Q12455	300 aa		11.1	□□□□□ -0.63
HEM12	YDR047W	CAD1	P24813	409 aa	Known RBP	11.09	□□□□□ -0.63
HEM12	YDR047W	NDI1	P32340	513 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	SMI1	P32566	505 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	TSA1	P34760	196 aa	Known RBP	11.09	□□□□□ -0.63
HEM12	YDR047W	FIR1	P40020	876 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	CNN1	P43618	361 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	RTT101	P47050	842 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	MRX6	P48564	524 aa		11.09	□□□□□ -0.63
HEM12	YDR047W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	11.09	□□□□□ -0.63	not detected
HEM12	YDR047W	RCF2	P53721	224 aa		11.09	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms