RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W MRI1Q06489 411 aaKnown RBP1.89□□□□□ -2.11
TRM3YDL112W RRD2Q12461 358 aa1.89□□□□□ -2.11
TRM3YDL112W YOR111WQ99210 232 aa1.89□□□□□ -2.11
TRM3YDL112W APE1P14904 514 aa1.88□□□□□ -2.11
TRM3YDL112W MCM3P24279 971 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W FUN30P31380 1131 aa1.88□□□□□ -2.11
TRM3YDL112W SPC29P33419 253 aa1.88□□□□□ -2.11
TRM3YDL112W SAS3P34218 831 aa1.88□□□□□ -2.11
TRM3YDL112W KDX1P36005 433 aa1.88□□□□□ -2.11
TRM3YDL112W NDT80P38830 627 aa1.88□□□□□ -2.11
TRM3YDL112W VHR1P40522 640 aa1.88□□□□□ -2.11
TRM3YDL112W NOG2P53742 486 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W YNL134CP53912 376 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W HDA1P53973 706 aa1.88□□□□□ -2.11
TRM3YDL112W WHI2P12611 486 aa1.88□□□□□ -2.11
TRM3YDL112W SEC21P32074 935 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W COT1P32798 439 aa1.88□□□□□ -2.11
TRM3YDL112W CBR1P38626 284 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W THI6P41835 540 aa1.88□□□□□ -2.11
TRM3YDL112W SEC5P89102 971 aa1.88□□□□□ -2.11
TRM3YDL112W YLR407WQ06070 228 aa1.88□□□□□ -2.11
TRM3YDL112W PEX19Q07418 342 aa1.88□□□□□ -2.11
TRM3YDL112W GUP2Q08929 609 aa1.88□□□□□ -2.11
TRM3YDL112W SRD1P09007 221 aa1.88□□□□□ -2.11
TRM3YDL112W BET2P20133 325 aa1.88□□□□□ -2.11
TRM3YDL112W HCM1P25364 564 aa1.88□□□□□ -2.11
TRM3YDL112W YKR051WP36142 418 aa1.88□□□□□ -2.11
TRM3YDL112W DRE2P36152 348 aa1.88□□□□□ -2.11
TRM3YDL112W TAT2P38967 592 aa1.88□□□□□ -2.11
TRM3YDL112W PLB1P39105 664 aa1.88□□□□□ -2.11
TRM3YDL112W ALT2P52892 507 aa1.88□□□□□ -2.11
TRM3YDL112W CUE3P53137 624 aaKnown RBP1.88□□□□□ -2.11
TRM3YDL112W ADA2Q02336 434 aa1.88□□□□□ -2.11
TRM3YDL112W CLN3P13365 580 aa1.87□□□□□ -2.11
TRM3YDL112W PUB1P32588 453 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
TRM3YDL112W STE13P33894 931 aa1.87□□□□□ -2.11
TRM3YDL112W YHR078WP38799 552 aa1.87□□□□□ -2.11
TRM3YDL112W DUN1P39009 513 aa1.87□□□□□ -2.11
TRM3YDL112W BUD6P41697 788 aa1.87□□□□□ -2.11
TRM3YDL112W LAM5P43560 674 aa1.87□□□□□ -2.11
TRM3YDL112W YJR096WP47137 282 aa1.87□□□□□ -2.11
TRM3YDL112W BNI5P53890 448 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W CSM3Q04659 317 aa1.87□□□□□ -2.11
TRM3YDL112W NSE1Q07913 336 aa1.87□□□□□ -2.11
TRM3YDL112W PSK2Q08217 1101 aa1.87□□□□□ -2.11
TRM3YDL112W TIP41Q12199 356 aa1.87□□□□□ -2.11
TRM3YDL112W RPL40AP0CH08 128 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W RPL40BP0CH09 128 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W SWI4P25302 1093 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W ADK2P26364 225 aa1.87□□□□□ -2.11
TRM3YDL112W PPZ1P26570 692 aa1.87□□□□□ -2.11
TRM3YDL112W EMC3P36039 253 aa1.87□□□□□ -2.11
TRM3YDL112W YHL017WP38745 532 aa1.87□□□□□ -2.11
TRM3YDL112W PCI8P40512 444 aa1.87□□□□□ -2.11
TRM3YDL112W ENT3P47160 408 aa1.87□□□□□ -2.11
TRM3YDL112W PSP1P50896 841 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W UME1Q03010 460 aa1.87□□□□□ -2.11
TRM3YDL112W CRD1Q07560 283 aa1.87□□□□□ -2.11
TRM3YDL112W TMA17Q12513 150 aa1.87□□□□□ -2.11
TRM3YDL112W MPD2Q99316 277 aa1.87□□□□□ -2.11
TRM3YDL112W FOB1O13329 566 aa1.87□□□□□ -2.11
TRM3YDL112W VAS1P07806 1104 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W KAR1P11927 433 aa1.87□□□□□ -2.11
TRM3YDL112W THR4P16120 514 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W ALG1P16661 449 aa1.87□□□□□ -2.11
TRM3YDL112W SKG6P32900 734 aaPredicted RBP1.87□□□□□ -2.11
TRM3YDL112W MEF2P39677 819 aa1.87□□□□□ -2.11
TRM3YDL112W RPN3P40016 523 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W YER186CP40101 306 aa1.87□□□□□ -2.11
TRM3YDL112W CTR1P49573 406 aa1.87□□□□□ -2.11
TRM3YDL112W PBP1P53297 722 aaKnown RBP1.87□□□□□ -2.11
TRM3YDL112W YGR283CP53336 341 aaPredicted RBP1.87□□□□□ -2.11
TRM3YDL112W NOP13P53883 403 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
TRM3YDL112W NHX1Q04121 633 aa1.87□□□□□ -2.11
TRM3YDL112W DNL4Q08387 944 aaPredicted RBP1.87□□□□□ -2.11
TRM3YDL112W ECM3Q99252 613 aa1.87□□□□□ -2.11
TRM3YDL112W HIS5P07172 385 aa1.87□□□□□ -2.11
TRM3YDL112W PGS1P25578 521 aa1.87□□□□□ -2.11
TRM3YDL112W YHR054CP38780 354 aa1.87□□□□□ -2.11
TRM3YDL112W SFB3P38810 929 aa1.87□□□□□ -2.11
TRM3YDL112W FMO1P38866 432 aa1.87□□□□□ -2.11
TRM3YDL112W DAS1P47005 663 aa1.87□□□□□ -2.11
TRM3YDL112W MNP1P53163 194 aaPredicted RBP1.87□□□□□ -2.11
TRM3YDL112W COX4P04037 155 aa1.86□□□□□ -2.11
TRM3YDL112W SNF1P06782 633 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W EAF5P39995 279 aa1.86□□□□□ -2.11
TRM3YDL112W CUL3P53202 744 aa1.86□□□□□ -2.11
TRM3YDL112W YNR061CP53747 219 aa1.86□□□□□ -2.11
TRM3YDL112W PNG1Q02890 363 aa1.86□□□□□ -2.11
TRM3YDL112W MFB1Q04922 465 aa1.86□□□□□ -2.11
TRM3YDL112W STP4Q07351 490 aa1.86□□□□□ -2.11
TRM3YDL112W IES4Q08561 116 aa1.86□□□□□ -2.11
TRM3YDL112W NPC2Q12408 173 aa1.86□□□□□ -2.11
TRM3YDL112W PCK1P10963 549 aa1.86□□□□□ -2.11
TRM3YDL112W RSA4P25382 515 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W PUP3P25451 205 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W MND2P40577 368 aa1.86□□□□□ -2.11
TRM3YDL112W NUP84P52891 726 aa1.86□□□□□ -2.11
TRM3YDL112W RTC4P53850 401 aa1.86□□□□□ -2.11
TRM3YDL112W YLR224WQ05947 369 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms