RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	ASP3-1	P0CZ17	362 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	MSB1	P21339	1137 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	GID7	P25569	745 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	RPL5	P26321	297 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	ZIP1	P31111	875 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	APE4	P38821	490 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	NMD3	P38861	518 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	BNA3	P47039	444 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	NOP9	P47077	666 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	RTA1	P53047	317 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	NUT1	P53114	1132 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	YGR117C	P53270	476 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	PRO2	P54885	456 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	REX2	P54964	269 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	NAN1	Q02931	896 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	TVP15	Q03860	143 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	ENT4	Q07872	247 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	IMA2	Q08295	589 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	CUE5	Q08412	411 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	MET7	Q08645	548 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	CHS5	Q12114	671 aa	Known RBP	4.36	□□□□□ -1.71
RPG1	YBR079C	NTO1	Q12311	748 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	ERP3	Q12403	225 aa		4.36	□□□□□ -1.71
RPG1	YBR079C	SUI3	P09064	285 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	GPA2	P10823	449 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	MSS116	P15424	664 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	PRP6	P19735	899 aa	Predicted RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	URA10	P30402	227 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	VPH2	P32341	215 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	HEM12	P32347	362 aa	Predicted RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	HSP78	P33416	811 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SRB2	P34162	210 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	NUP60	P39705	539 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	TGL3	P40308	642 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	NUP84	P52891	726 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SXM1	Q04175	944 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	ATG20	Q07528	640 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	MCH5	Q08777	521 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SNX3	Q08826	162 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	IOC2	Q12072	812 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SPT16	P32558	1035 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	UTR2	P32623	467 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SKG6	P32900	734 aa	Predicted RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	MRP4	P32902	394 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	GEM1	P39722	662 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	YEL025C	P39991	1188 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	GTT3	P39996	337 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	FMP32	P43557	207 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	RSC8	P43609	557 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	MNP1	P53163	194 aa	Predicted RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	YGR127W	P53275	312 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	LSC1	P53598	329 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	ATG17	Q06410	417 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	YLL056C	Q12177	298 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	YMR030W-A	Q3E760	96 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	RGS2	Q99188	309 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	AI5_ALPHA	Q9ZZX1	630 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	YLR278C	Q05854	1341 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	VMA2	P16140	517 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	DAL1	P32375	460 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	KAR9	P32526	644 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	FRE1	P32791	686 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	MMS4	P38257	691 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	HMF1	P40037	129 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	VMA13	P41807	478 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	ULI1	P43604	169 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	TEL2	P53038	688 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SHE10	P53075	577 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	CSN9	Q03981	162 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	YDR179W-A	Q03983	463 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	DOT1	Q04089	582 aa	Known RBP	4.35	□□□□□ -1.71
RPG1	YBR079C	CDD1	Q06549	142 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	TAF3	Q12297	353 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	LDB17	Q12342	491 aa		4.35	□□□□□ -1.71
RPG1	YBR079C	SEC63	P14906	663 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	YCL068C	P25593	260 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	VBA3	P25594	458 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	NUF2	P33895	451 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	PTC1	P35182	281 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	ASK1	P35734	292 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	VBA5	P36172	582 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	AGP2	P38090	596 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	SPR3	P41901	512 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	ALT1	P52893	592 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	MND1	P53102	219 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	YTP1	P53584	459 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	SQS1	P53866	767 aa	Known RBP	4.34	□□□□□ -1.71
RPG1	YBR079C	CWC21	Q03375	135 aa	Known RBP	4.34	□□□□□ -1.71
RPG1	YBR079C	SPC2	Q04969	178 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	THI21	Q08975	551 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	RRP36	Q12481	300 aa	Predicted RBP	4.34	□□□□□ -1.71
RPG1	YBR079C	CSR2	Q12734	1121 aa		4.34	□□□□□ -1.71
RPG1	YBR079C	STE2	D6VTK4	431 aa		4.34	□□□□□ -1.72
RPG1	YBR079C	ERG20	P08524	352 aa	Known RBP	4.34	□□□□□ -1.72
RPG1	YBR079C	ATR1	P13090	542 aa		4.34	□□□□□ -1.72
RPG1	YBR079C	PUT4	P15380	627 aa		4.34	□□□□□ -1.72
RPG1	YBR079C	DPB2	P24482	689 aa	Predicted RBP	4.34	□□□□□ -1.72
RPG1	YBR079C	CDC3	P32457	520 aa	Known RBP	4.34	□□□□□ -1.72
RPG1	YBR079C	NGG1	P32494	702 aa		4.34	□□□□□ -1.72
RPG1	YBR079C	GLC3	P32775	704 aa		4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms