RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	PRP28	P23394	588 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	ERG4	P25340	473 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	CWH43	P25618	953 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	MVD1	P32377	396 aa	Known RBP	4.88	□□□□□ -1.63
SHE1	YBL031W	MTC7	P32633	139 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	YLF2	P38746	405 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	REV7	P38927	245 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	YJL163C	P46996	555 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	UBC11	P52492	156 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	YGR021W	P53212	290 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	HEF3	P53978	1044 aa	Known RBP	4.88	□□□□□ -1.63
SHE1	YBL031W	RNT1	Q02555	471 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	FDC1	Q03034	503 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	TRI1	Q05024	226 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	ADY4	Q05955	493 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	BRE1	Q07457	700 aa	Known RBP	4.88	□□□□□ -1.63
SHE1	YBL031W	PSR2	Q07949	397 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	FRE5	Q08908	694 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	AIM41	Q12032	185 aa		4.88	□□□□□ -1.63
SHE1	YBL031W	DAL5	P15365	543 aa		4.87	□□□□□ -1.63
SHE1	YBL031W	HRR25	P29295	494 aa	Known RBP	4.87	□□□□□ -1.63
SHE1	YBL031W	DEF1	P35732	738 aa	Known RBP	4.87	□□□□□ -1.63
SHE1	YBL031W	FMP52	P40008	231 aa		4.87	□□□□□ -1.63
SHE1	YBL031W	YAP1802	P53309	568 aa		4.87	□□□□□ -1.63
SHE1	YBL031W	TEP1	P53916	434 aa		4.87	□□□□□ -1.63
SHE1	YBL031W	SIR3	P06701	978 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	VAS1	P07806	1104 aa	Known RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	FEN2	P25621	512 aa	Known RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	NTH1	P32356	751 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	BCS1	P32839	456 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	SWD1	P39706	426 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	ACA1	P39970	489 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	SCS2	P40075	244 aa	Known RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	SAP185	P40856	1058 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	MAD2	P40958	196 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	DSD1	P53095	428 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	KIN4	Q01919	800 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	HIM1	Q06674	414 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	YCG1	Q06680	1035 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	RTK1	Q12100	620 aa	Predicted RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	CHS5	Q12114	671 aa	Known RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	YKL033W-A	Q86ZR7	236 aa		4.86	□□□□□ -1.63
SHE1	YBL031W	ADE6	P38972	1358 aa	Known RBP	4.86	□□□□□ -1.63
SHE1	YBL031W	PPR1	P07272	904 aa	Predicted RBP	4.85	□□□□□ -1.63
SHE1	YBL031W	RPS19A	P07280	144 aa	Known RBP	4.85	□□□□□ -1.63
SHE1	YBL031W	RPS19B	P07281	144 aa	Predicted RBP	4.85	□□□□□ -1.63
SHE1	YBL031W	TRX2	P22803	104 aa	Known RBP	4.85	□□□□□ -1.63
SHE1	YBL031W	COS111	P38308	924 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	YIL077C	P40508	320 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	YNR071C	P53757	342 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	YFT2	Q06676	274 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	RTT109	Q07794	436 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	IRC13	Q08630	104 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	HOS1	Q12214	470 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	RAD50	P12753	1312 aa		4.85	□□□□□ -1.63
SHE1	YBL031W	ALG7	P07286	448 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	RPS24A	P0CX31	135 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	RPS24B	P0CX32	135 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	ADH4	P10127	382 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	CBP3	P21560	335 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	ROX1	P25042	368 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	HIS7	P33734	552 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	EBP2	P36049	427 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	CHS7	P38843	316 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	FUN12	P39730	1002 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	FTR1	P40088	404 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	TAH11	P47112	604 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	PAN2	P53010	1115 aa	Predicted RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	TEL2	P53038	688 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	MDR1	P53258	950 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	EIS1	Q05050	843 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	TRM13	Q12383	476 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	DBP10	Q12389	995 aa	Known RBP	4.84	□□□□□ -1.63
SHE1	YBL031W	ZRT2	Q12436	422 aa		4.84	□□□□□ -1.63
SHE1	YBL031W	PCT1	P13259	424 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	TUP1	P16649	713 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	TPM1	P17536	199 aa	Known RBP	4.83	□□□□□ -1.64
SHE1	YBL031W	MSM1	P22438	575 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	MSH1	P25846	959 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	SWE1	P32944	819 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	APM3	P38153	483 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	CDS1	P38221	457 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	YNG2	P38806	282 aa	Known RBP	4.83	□□□□□ -1.64
SHE1	YBL031W	CRG1	P38892	291 aa	RIP-Chip data	4.83	□□□□□ -1.64	not detected
SHE1	YBL031W	IMA5	P40884	581 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	RFX1	P48743	811 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	FHN1	P53279	174 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	YLR040C	Q07988	224 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	DIN7	Q12086	430 aa		4.83	□□□□□ -1.64
SHE1	YBL031W	MLP1	Q02455	1875 aa	Known RBP	4.83	□□□□□ -1.64
SHE1	YBL031W	AUS1	Q08409	1394 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	URA3	P03962	267 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	SEC12	P11655	471 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	ABF1	P14164	731 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	ARG1	P22768	420 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	PHO11	P35842	467 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	RMA1	P36001	430 aa	Known RBP	4.82	□□□□□ -1.64
SHE1	YBL031W	PHO12	P38693	467 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	SFB3	P38810	929 aa		4.82	□□□□□ -1.64
SHE1	YBL031W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms