RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C JJJ2P46997 583 aa5.62□□□□□ -1.51
RFA1YAR007C EMC2P47133 292 aaKnown RBP5.62□□□□□ -1.51
RFA1YAR007C LSC1P53598 329 aaKnown RBP5.62□□□□□ -1.51
RFA1YAR007C YPL062WQ02781 134 aa5.62□□□□□ -1.51
RFA1YAR007C ARP9Q05123 467 aa5.62□□□□□ -1.51
RFA1YAR007C UIP4Q08926 304 aa5.62□□□□□ -1.51
RFA1YAR007C TMA46Q12000 345 aaKnown RBP5.62□□□□□ -1.51
RFA1YAR007C GPM3Q12326 303 aa5.62□□□□□ -1.51
RFA1YAR007C SCM3Q12334 223 aa5.62□□□□□ -1.51
RFA1YAR007C LSO1Q3E827 93 aa5.62□□□□□ -1.51
RFA1YAR007C BRR1Q99177 341 aaPredicted RBP5.62□□□□□ -1.51
RFA1YAR007C PMD1P32634 1753 aa5.61□□□□□ -1.51
RFA1YAR007C TEF1P02994 458 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C PCK1P10963 549 aa5.61□□□□□ -1.51
RFA1YAR007C ADP1P25371 1049 aa5.61□□□□□ -1.51
RFA1YAR007C ITR2P30606 609 aa5.61□□□□□ -1.51
RFA1YAR007C TFB1P32776 642 aa5.61□□□□□ -1.51
RFA1YAR007C RPS0AP32905 252 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C KDX1P36005 433 aa5.61□□□□□ -1.51
RFA1YAR007C SUL1P38359 859 aa5.61□□□□□ -1.51
RFA1YAR007C MSR1P38714 643 aa5.61□□□□□ -1.51
RFA1YAR007C UBP7P40453 1071 aa5.61□□□□□ -1.51
RFA1YAR007C MET18P40469 1032 aa5.61□□□□□ -1.51
RFA1YAR007C SAE2P46946 345 aa5.61□□□□□ -1.51
RFA1YAR007C DIP5P53388 608 aa5.61□□□□□ -1.51
RFA1YAR007C PRO2P54885 456 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C SED5Q01590 340 aa5.61□□□□□ -1.51
RFA1YAR007C FOX2Q02207 900 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C NAN1Q02931 896 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C RNY1Q02933 434 aaKnown RBP5.61□□□□□ -1.51
RFA1YAR007C YML108WQ03759 105 aa5.61□□□□□ -1.51
RFA1YAR007C COQ9Q05779 260 aa5.61□□□□□ -1.51
RFA1YAR007C CDA1Q06702 301 aa5.61□□□□□ -1.51
RFA1YAR007C YDL114WQ07530 308 aa5.61□□□□□ -1.51
RFA1YAR007C YLR278CQ05854 1341 aa5.61□□□□□ -1.51
RFA1YAR007C TIF1P10081 395 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C AFT1P22149 690 aa5.6□□□□□ -1.51
RFA1YAR007C CAD1P24813 409 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C DAL2P25335 343 aa5.6□□□□□ -1.51
RFA1YAR007C SPR1P32603 445 aa5.6□□□□□ -1.51
RFA1YAR007C YBL036CP38197 257 aa5.6□□□□□ -1.51
RFA1YAR007C MUM2P38236 366 aa5.6□□□□□ -1.51
RFA1YAR007C PCA1P38360 1216 aa5.6□□□□□ -1.51
RFA1YAR007C AVT6P40074 448 aa5.6□□□□□ -1.51
RFA1YAR007C PEA2P40091 420 aa5.6□□□□□ -1.51
RFA1YAR007C RRD1P40454 393 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C YJL055WP47044 245 aa5.6□□□□□ -1.51
RFA1YAR007C ATP22P50273 684 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C LSG1P53145 640 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C SYF1Q04048 859 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C ERB1Q04660 807 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C PRM6Q04705 352 aa5.6□□□□□ -1.51
RFA1YAR007C SPC2Q04969 178 aa5.6□□□□□ -1.51
RFA1YAR007C SEC10Q06245 871 aa5.6□□□□□ -1.51
RFA1YAR007C SGO1Q08490 590 aa5.6□□□□□ -1.51
RFA1YAR007C ENV9Q08651 330 aa5.6□□□□□ -1.51
RFA1YAR007C YOR342CQ12182 319 aa5.6□□□□□ -1.51
RFA1YAR007C YDR018CQ12185 396 aa5.6□□□□□ -1.51
RFA1YAR007C BBP1Q12365 385 aa5.6□□□□□ -1.51
RFA1YAR007C RKM4Q12504 494 aa5.6□□□□□ -1.51
RFA1YAR007C TUB3P09734 445 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C PHO8P11491 566 aa5.6□□□□□ -1.51
RFA1YAR007C MCM1P11746 286 aa5.6□□□□□ -1.51
RFA1YAR007C RSR1P13856 272 aa5.6□□□□□ -1.51
RFA1YAR007C URA7P28274 579 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C NTR2P36118 322 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C KAP104P38217 918 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C NDT80P38830 627 aa5.6□□□□□ -1.51
RFA1YAR007C UTP9P38882 575 aaKnown RBP5.6□□□□□ -1.51
RFA1YAR007C PMC1P38929 1173 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C YJL206CP39529 758 aa5.6□□□□□ -1.51
RFA1YAR007C HPM1P40481 377 aa5.6□□□□□ -1.51
RFA1YAR007C DOT5P40553 215 aa5.6□□□□□ -1.51
RFA1YAR007C ALY2P47029 1046 aa5.6□□□□□ -1.51
RFA1YAR007C MRK1P50873 501 aa5.6□□□□□ -1.51
RFA1YAR007C HST2P53686 357 aa5.6□□□□□ -1.51
RFA1YAR007C ARK1P53974 638 aa5.6□□□□□ -1.51
RFA1YAR007C RPA49Q01080 415 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C FIN1Q03898 291 aa5.6□□□□□ -1.51
RFA1YAR007C SMC5Q08204 1093 aa5.6□□□□□ -1.51
RFA1YAR007C YIG1Q08956 461 aa5.6□□□□□ -1.51
RFA1YAR007C RKM1Q08961 583 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C RRP36Q12481 300 aaPredicted RBP5.6□□□□□ -1.51
RFA1YAR007C SNF4P12904 322 aa5.59□□□□□ -1.51
RFA1YAR007C CDC20P26309 610 aa5.59□□□□□ -1.51
RFA1YAR007C KRE2P27809 442 aa5.59□□□□□ -1.51
RFA1YAR007C PTP2P29461 750 aa5.59□□□□□ -1.51
RFA1YAR007C ZIP1P31111 875 aa5.59□□□□□ -1.51
RFA1YAR007C CCR4P31384 837 aaKnown RBP5.59□□□□□ -1.51
RFA1YAR007C ACH1P32316 526 aa5.59□□□□□ -1.51
RFA1YAR007C GDA1P32621 518 aa5.59□□□□□ -1.51
RFA1YAR007C HBS1P32769 611 aaKnown RBP5.59□□□□□ -1.51
RFA1YAR007C AFG2P32794 780 aa5.59□□□□□ -1.51
RFA1YAR007C HSP78P33416 811 aa5.59□□□□□ -1.51
RFA1YAR007C MAE1P36013 669 aaKnown RBP5.59□□□□□ -1.51
RFA1YAR007C GIP1P38229 639 aa5.59□□□□□ -1.51
RFA1YAR007C YHR112CP38716 378 aa5.59□□□□□ -1.51
RFA1YAR007C SSZ1P38788 538 aaKnown RBP5.59□□□□□ -1.51
RFA1YAR007C VPS45P38932 577 aa5.59□□□□□ -1.51
RFA1YAR007C PIK1P39104 1066 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms