RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 XRN1Q8IZH2 1706 aaKnown RBP5.95□□□□□ -1.46
HERC1-211ENST00000560983 CEP120Q8N960 986 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 GPR152Q8TDT2 470 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 BTG4Q9NY30 223 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 ABI2Q9NYB9 513 aaPredicted RBP5.95□□□□□ -1.46
HERC1-211ENST00000560983 PPME1Q9Y570 386 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 PCNTO95613 3336 aa5.95□□□□□ -1.46
HERC1-211ENST00000560983 ABCC5O15440 1437 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 ALX3O95076 343 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 CYP2E1P05181 493 aaPredicted RBP5.94□□□□□ -1.46
HERC1-211ENST00000560983 ATP2B4P23634 1241 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 KRT28Q7Z3Y7 464 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 ADAM19Q9H013 955 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 SEPT3Q9UH03 358 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 SERPINA10Q9UK55 444 aa5.94□□□□□ -1.46
HERC1-211ENST00000560983 LRPPRCP42704 1394 aaKnown RBP5.93□□□□□ -1.46
HERC1-211ENST00000560983 GPR162Q16538 588 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 TTC39BQ5VTQ0 682 aaPredicted RBP5.93□□□□□ -1.46
HERC1-211ENST00000560983 HELQQ8TDG4 1101 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 PBX4Q9BYU1 374 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 RASSF4Q9H2L5 321 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 TMEM63CQ9P1W3 806 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 SALL4Q9UJQ4 1053 aa5.93□□□□□ -1.46
HERC1-211ENST00000560983 MYOM3Q5VTT5 1437 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 RGPD1P0DJD0 1748 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 NFKBIEO00221 500 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 SMNDC1O75940 238 aaKnown RBP eCLIP5.92□□□□□ -1.46
HERC1-211ENST00000560983 WISP1O95388 367 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 CDC27P30260 824 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 CEP135Q66GS9 1140 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 NUDT16Q96DE0 195 aaKnown RBP5.92□□□□□ -1.46
HERC1-211ENST00000560983 UBL7Q96S82 380 aaPredicted RBP5.92□□□□□ -1.46
HERC1-211ENST00000560983 ELP3Q9H9T3 547 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 KCNK4Q9NYG8 393 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 CNTN3Q9P232 1028 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 NRXN3Q9Y4C0 1643 aa5.92□□□□□ -1.46
HERC1-211ENST00000560983 TNS1Q9HBL0 1735 aaKnown RBP5.91□□□□□ -1.46
HERC1-211ENST00000560983 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 TMEM88BA6NKF7 163 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 LINC01387J3KSC0 135 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 PLSCR1O15162 318 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 FSTP19883 344 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 EPHA1P21709 976 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 AGGF1Q8N302 714 aaeCLIP5.91□□□□□ -1.46
HERC1-211ENST00000560983 CCDC97Q96F63 343 aaPredicted RBP5.91□□□□□ -1.46
HERC1-211ENST00000560983 SPACA7Q96KW9 195 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 POP1Q99575 1024 aaKnown RBP5.91□□□□□ -1.46
HERC1-211ENST00000560983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.91□□□□□ -1.46
HERC1-211ENST00000560983 NRKQ7Z2Y5 1582 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 SPATA31A1Q5TZJ5 1347 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 MAP3K5Q99683 1374 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 NALCNQ8IZF0 1738 aa5.91□□□□□ -1.46
HERC1-211ENST00000560983 MARF1Q9Y4F3 1742 aaKnown RBP5.91□□□□□ -1.46
HERC1-211ENST00000560983 USP32Q8NFA0 1604 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 RPLP1P05386 114 aaKnown RBP5.9□□□□□ -1.46
HERC1-211ENST00000560983 NPR3P17342 541 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 CD68P34810 354 aaPredicted RBP5.9□□□□□ -1.46
HERC1-211ENST00000560983 SCNN1AP37088 669 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 ATCAYQ86WG3 371 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 ARMC10Q8N2F6 343 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 KLHL23Q8NBE8 558 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 WNT8BQ93098 351 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 LACRTQ9GZZ8 138 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 MTFR1LQ9H019 292 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 CHRDQ9H2X0 955 aa5.9□□□□□ -1.46
HERC1-211ENST00000560983 SHANK3Q9BYB0 1731 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 FSCN2O14926 492 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 ADAM11O75078 769 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 PDGFAP04085 211 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 SSFA2P28290 1259 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 PDE3BQ13370 1112 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 UVSSAQ2YD98 709 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 PTF1AQ7RTS3 328 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 FOXD4L4Q8WXT5 416 aaPredicted RBP5.89□□□□□ -1.47
HERC1-211ENST00000560983 FAM46AQ96IP4 442 aaKnown RBP5.89□□□□□ -1.47
HERC1-211ENST00000560983 GGNBP2Q9H3C7 697 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 RAXQ9Y2V3 346 aa5.89□□□□□ -1.47
HERC1-211ENST00000560983 NUP188Q5SRE5 1749 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 H3BRJ5 948 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 YBX3P16989 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERC1-211ENST00000560983 PTPRAP18433 802 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 MZF1P28698 734 aaPredicted RBP5.88□□□□□ -1.47
HERC1-211ENST00000560983 CD97P48960 835 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 SLC15A2Q16348 729 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 NOM1Q5C9Z4 860 aaKnown RBP5.88□□□□□ -1.47
HERC1-211ENST00000560983 TXNDC11Q6PKC3 985 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 ZNF438Q7Z4V0 828 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 WAPLQ7Z5K2 1190 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 NBPF11Q86T75 865 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 JMYQ8N9B5 988 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 C1orf127Q8N9H9 656 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 EDEM1Q92611 657 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 SH2B1Q9NRF2 756 aaPredicted RBP5.88□□□□□ -1.47
HERC1-211ENST00000560983 DZANK1Q9NVP4 752 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 SBNO1A3KN83 1393 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 ANKRD30AQ9BXX3 1397 aa5.88□□□□□ -1.47
HERC1-211ENST00000560983 HFM1A2PYH4 1435 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms