RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	TY1B-BL	Q12490	1755 aa		15.56	■□□□□ 0.08
HHO1	YPL127C	RPA190	P10964	1664 aa	Known RBP	15.53	■□□□□ 0.08
HHO1	YPL127C	IFH1	P39520	1085 aa		15.52	■□□□□ 0.08
HHO1	YPL127C	ULS1	Q08562	1619 aa		15.5	■□□□□ 0.07
HHO1	YPL127C	GEA1	P47102	1408 aa	Predicted RBP	15.5	■□□□□ 0.07
HHO1	YPL127C	IKI3	Q06706	1349 aa	Known RBP	15.48	■□□□□ 0.07
HHO1	YPL127C	RTT106	P40161	455 aa		15.45	■□□□□ 0.06
HHO1	YPL127C	GEA2	P39993	1459 aa	Known RBP	15.4	■□□□□ 0.06
HHO1	YPL127C	NTE1	Q04958	1679 aa		15.39	■□□□□ 0.05
HHO1	YPL127C	MET5	P47169	1442 aa		15.39	■□□□□ 0.05
HHO1	YPL127C	RPO21	P04050	1733 aa	Known RBP	15.39	■□□□□ 0.05
HHO1	YPL127C	NUP159	P40477	1460 aa		15.38	■□□□□ 0.05
HHO1	YPL127C	NUP170	P38181	1502 aa		15.32	■□□□□ 0.04
HHO1	YPL127C	MET10	P39692	1035 aa		15.31	■□□□□ 0.04
HHO1	YPL127C	IRC20	Q06554	1556 aa		15.29	■□□□□ 0.04
HHO1	YPL127C	VPS15	P22219	1454 aa		15.29	■□□□□ 0.04
HHO1	YPL127C	TY3B-G	Q99315	1547 aa		15.28	■□□□□ 0.04
HHO1	YPL127C	CAT8	P39113	1433 aa		15.28	■□□□□ 0.04
HHO1	YPL127C	PDR12	Q02785	1511 aa		15.22	■□□□□ 0.03
HHO1	YPL127C	YRF1-1	P0CX20	1796 aa		15.21	■□□□□ 0.02
HHO1	YPL127C	YRF1-5	P0CX21	1796 aa		15.21	■□□□□ 0.02
HHO1	YPL127C	YRF1-8	P0CX22	1796 aa		15.21	■□□□□ 0.02
HHO1	YPL127C	SSM4	P40318	1319 aa		15.2	■□□□□ 0.02
HHO1	YPL127C	YBT1	P32386	1661 aa		15.17	■□□□□ 0.02
HHO1	YPL127C	NUP157	P40064	1391 aa	Known RBP	15.11	■□□□□ 0.01
HHO1	YPL127C	PDR10	P51533	1564 aa		15.11	■□□□□ 0.01
HHO1	YPL127C	SPO14	P36126	1683 aa		15.11	■□□□□ 0.01
HHO1	YPL127C	GDB1	Q06625	1536 aa		15.1	■□□□□ 0.01
HHO1	YPL127C	SRB8	P25648	1427 aa		15.07	■□□□□ 0
HHO1	YPL127C	CKB1	P43639	278 aa		15.05	■□□□□ -0
HHO1	YPL127C	ARO1	P08566	1588 aa	Known RBP	15.02	□□□□□ -0.01
HHO1	YPL127C	LTE1	P07866	1435 aa		15.01	□□□□□ -0.01
HHO1	YPL127C	IQG1	Q12280	1495 aa		14.95	□□□□□ -0.02
HHO1	YPL127C	YSP2	Q06681	1438 aa		14.95	□□□□□ -0.02
HHO1	YPL127C	BUD3	P25558	1636 aa		14.95	□□□□□ -0.02
HHO1	YPL127C	MMS1	Q06211	1407 aa		14.92	□□□□□ -0.02
HHO1	YPL127C	BUD21	Q08492	214 aa	Predicted RBP	14.9	□□□□□ -0.02
HHO1	YPL127C	SEC7	P11075	2009 aa	Known RBP	14.83	□□□□□ -0.03
HHO1	YPL127C	DRS2	P39524	1355 aa		14.81	□□□□□ -0.04
HHO1	YPL127C	BNR1	P40450	1375 aa		14.81	□□□□□ -0.04
HHO1	YPL127C	TRM3	Q07527	1436 aa		14.76	□□□□□ -0.05
HHO1	YPL127C	GCN2	P15442	1659 aa		14.76	□□□□□ -0.05
HHO1	YPL127C	ITT1	Q04638	464 aa		14.72	□□□□□ -0.05
HHO1	YPL127C	DOP1	Q03921	1698 aa		14.69	□□□□□ -0.06
HHO1	YPL127C	BNI1	P41832	1953 aa		14.67	□□□□□ -0.06
HHO1	YPL127C	TFA1	P36100	482 aa		14.62	□□□□□ -0.07
HHO1	YPL127C	PAF1	P38351	445 aa		14.61	□□□□□ -0.07
HHO1	YPL127C	NOP7	P53261	605 aa	Known RBP	14.6	□□□□□ -0.07
HHO1	YPL127C	CHC1	P22137	1653 aa	Known RBP	14.59	□□□□□ -0.07
HHO1	YPL127C	BFR2	Q06631	534 aa	Known RBP	14.55	□□□□□ -0.08
HHO1	YPL127C	YOR093C	Q12275	1648 aa		14.53	□□□□□ -0.08
HHO1	YPL127C	PDR5	P33302	1511 aa	Known RBP	14.53	□□□□□ -0.08
HHO1	YPL127C	POL5	P39985	1022 aa	Known RBP	14.51	□□□□□ -0.09
HHO1	YPL127C	URN1	Q06525	465 aa	Known RBP	14.51	□□□□□ -0.09
HHO1	YPL127C	RAV1	P47104	1357 aa		14.46	□□□□□ -0.1
HHO1	YPL127C	NUP188	P52593	1655 aa	Known RBP	14.46	□□□□□ -0.1
HHO1	YPL127C	RTC1	Q08281	1341 aa		14.42	□□□□□ -0.1
HHO1	YPL127C	VMR1	P38735	1592 aa		14.42	□□□□□ -0.1
HHO1	YPL127C	PDR11	P40550	1411 aa		14.41	□□□□□ -0.1
HHO1	YPL127C	DNF2	Q12675	1612 aa		14.41	□□□□□ -0.1
HHO1	YPL127C	IPL1	P38991	367 aa		14.41	□□□□□ -0.1
HHO1	YPL127C	IML1	P47170	1584 aa		14.39	□□□□□ -0.11
HHO1	YPL127C	YAP3	P38749	330 aa		14.38	□□□□□ -0.11
HHO1	YPL127C	TYS1	P36421	394 aa	Known RBP	14.32	□□□□□ -0.12
HHO1	YPL127C	ESL2	P36168	1195 aa		14.29	□□□□□ -0.12
HHO1	YPL127C	TY3B-I	Q7LHG5	1498 aa	Known RBP	14.25	□□□□□ -0.13
HHO1	YPL127C	TAF5	P38129	798 aa		14.24	□□□□□ -0.13
HHO1	YPL127C	HAP1	P0CE41	1502 aa		14.24	□□□□□ -0.13
HHO1	YPL127C	SEC3	P33332	1336 aa	Known RBP	14.19	□□□□□ -0.14
HHO1	YPL127C	SCT1	P32784	759 aa		14.19	□□□□□ -0.14
HHO1	YPL127C	ORC1	P54784	914 aa	Predicted RBP	14.18	□□□□□ -0.14
HHO1	YPL127C	NUP192	P47054	1683 aa		14.17	□□□□□ -0.14
HHO1	YPL127C	ALD4	P46367	519 aa	Known RBP	14.16	□□□□□ -0.14
HHO1	YPL127C	MHP1	P43638	1398 aa		14.15	□□□□□ -0.14
HHO1	YPL127C	ABP1	P15891	592 aa	Known RBP	14.14	□□□□□ -0.15
HHO1	YPL127C	KIP3	P53086	805 aa	Known RBP	14.13	□□□□□ -0.15
HHO1	YPL127C	DNF3	Q12674	1656 aa		14.09	□□□□□ -0.15
HHO1	YPL127C	YLR419W	Q06698	1435 aa	Known RBP	14.07	□□□□□ -0.16
HHO1	YPL127C	SPE2	P21182	396 aa		14.06	□□□□□ -0.16
HHO1	YPL127C	NAP1	P25293	417 aa	Known RBP	14.06	□□□□□ -0.16
HHO1	YPL127C	MAK10	Q02197	733 aa		14.06	□□□□□ -0.16
HHO1	YPL127C	RAD9	P14737	1309 aa		14.06	□□□□□ -0.16
HHO1	YPL127C	BCK1	Q01389	1478 aa		14.06	□□□□□ -0.16
HHO1	YPL127C	TAF8	Q03750	510 aa		14.04	□□□□□ -0.16
HHO1	YPL127C	SPT7	P35177	1332 aa		14.04	□□□□□ -0.16
HHO1	YPL127C	ENP1	P38333	483 aa	Known RBP	14.03	□□□□□ -0.16
HHO1	YPL127C	CAB1	Q04430	367 aa		14.02	□□□□□ -0.17
HHO1	YPL127C	PDS5	Q04264	1277 aa		14.01	□□□□□ -0.17
HHO1	YPL127C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	14	□□□□□ -0.17	not detected
HHO1	YPL127C	MRX12	P47084	519 aa		14	□□□□□ -0.17
HHO1	YPL127C	CHZ1	P40019	153 aa	Predicted RBP	13.93	□□□□□ -0.18
HHO1	YPL127C	PSD2	P53037	1138 aa	Known RBP	13.93	□□□□□ -0.18
HHO1	YPL127C	CFT1	Q06632	1357 aa	Known RBP	13.93	□□□□□ -0.18
HHO1	YPL127C	KRE5	P22023	1365 aa		13.92	□□□□□ -0.18
HHO1	YPL127C	RIA1	P53893	1110 aa		13.91	□□□□□ -0.18
HHO1	YPL127C	FKH1	P40466	484 aa		13.86	□□□□□ -0.19
HHO1	YPL127C	TY1B-NL2	Q99337	1749 aa	Known RBP	13.83	□□□□□ -0.2
HHO1	YPL127C	RTG3	P38165	486 aa		13.82	□□□□□ -0.2
HHO1	YPL127C	LEU3	P08638	886 aa		13.81	□□□□□ -0.2
HHO1	YPL127C	YNR029C	P53729	429 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms