RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC29, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC29YPL124W PTC3P34221 468 aaKnown RBP8.59□□□□□ -1.03
SPC29YPL124W MIF2P35201 549 aa8.59□□□□□ -1.03
SPC29YPL124W PTC4P38089 393 aa8.59□□□□□ -1.03
SPC29YPL124W GRE2Q12068 342 aaKnown RBP8.59□□□□□ -1.03
SPC29YPL124W COQ8P27697 501 aa8.57□□□□□ -1.04
SPC29YPL124W YEL023CP39992 682 aa8.57□□□□□ -1.04
SPC29YPL124W GUT1P32190 709 aa8.55□□□□□ -1.04
SPC29YPL124W TFG1P41895 735 aaPredicted RBP8.53□□□□□ -1.04
SPC29YPL124W NST1P53935 1240 aa8.52□□□□□ -1.05
SPC29YPL124W YDL129WQ07555 291 aa8.52□□□□□ -1.05
SPC29YPL124W ATH1P48016 1211 aa8.51□□□□□ -1.05
SPC29YPL124W NOP53Q12080 455 aaKnown RBP8.51□□□□□ -1.05
SPC29YPL124W SAP30P38429 201 aa8.48□□□□□ -1.05
SPC29YPL124W SOL3P38858 249 aa8.48□□□□□ -1.05
SPC29YPL124W PML39Q03760 334 aa8.4□□□□□ -1.06
SPC29YPL124W MPH3P0CE00 602 aa8.39□□□□□ -1.07
SPC29YPL124W CHL1P22516 861 aaPredicted RBP8.39□□□□□ -1.07
SPC29YPL124W AI4P03878 556 aa8.38□□□□□ -1.07
SPC29YPL124W PRE3P38624 215 aa8.38□□□□□ -1.07
SPC29YPL124W ILV3P39522 585 aaKnown RBP8.35□□□□□ -1.07
SPC29YPL124W YGR273CP53329 174 aa8.34□□□□□ -1.07
SPC29YPL124W YDR344CQ05510 147 aa8.34□□□□□ -1.07
SPC29YPL124W MID1P41821 548 aa8.32□□□□□ -1.08
SPC29YPL124W SET1P38827 1080 aaKnown RBP8.3□□□□□ -1.08
SPC29YPL124W BCK2P33306 851 aa8.28□□□□□ -1.08
SPC29YPL124W ARH1P48360 493 aa8.28□□□□□ -1.08
SPC29YPL124W ELP4Q02884 456 aaKnown RBP8.24□□□□□ -1.09
SPC29YPL124W SLI15P38283 698 aa8.2□□□□□ -1.1
SPC29YPL124W PEX29Q03370 554 aa8.19□□□□□ -1.1
SPC29YPL124W KEX1P09620 729 aa8.18□□□□□ -1.1
SPC29YPL124W MPC54Q08550 464 aa8.18□□□□□ -1.1
SPC29YPL124W SPT23P35210 1082 aa8.17□□□□□ -1.1
SPC29YPL124W UBP14P38237 781 aaKnown RBP8.17□□□□□ -1.1
SPC29YPL124W VRP1P37370 817 aa8.16□□□□□ -1.1
SPC29YPL124W HAP5Q02516 242 aa8.16□□□□□ -1.1
SPC29YPL124W XDJ1P39102 459 aa8.15□□□□□ -1.1
SPC29YPL124W YLR326WQ06170 240 aaKnown RBP8.15□□□□□ -1.1
SPC29YPL124W BNI4P53858 892 aa8.13□□□□□ -1.11
SPC29YPL124W NMA111P53920 997 aa8.12□□□□□ -1.11
SPC29YPL124W IFH1P39520 1085 aa8.11□□□□□ -1.11
SPC29YPL124W DPL1Q05567 589 aa8.11□□□□□ -1.11
SPC29YPL124W YML082WQ04533 649 aaKnown RBP8.1□□□□□ -1.11
SPC29YPL124W YPR148CQ06523 435 aa8.1□□□□□ -1.11
SPC29YPL124W VHR2P40041 505 aa8.08□□□□□ -1.12
SPC29YPL124W PCS60P38137 543 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12 RIP-Chip
SPC29YPL124W YDR090CQ03193 310 aa8.05□□□□□ -1.12
SPC29YPL124W CDC73Q06697 393 aa8.05□□□□□ -1.12
SPC29YPL124W ISU2Q12056 156 aa8.05□□□□□ -1.12
SPC29YPL124W PTC2P39966 464 aaKnown RBP8.04□□□□□ -1.12
SPC29YPL124W RAD54P32863 898 aa8.03□□□□□ -1.12
SPC29YPL124W RAM1P22007 431 aa8.01□□□□□ -1.13
SPC29YPL124W REF2P42073 533 aaPredicted RBP7.99□□□□□ -1.13
SPC29YPL124W YPR015CQ12531 247 aa7.97□□□□□ -1.13
SPC29YPL124W GAP1P19145 602 aaPredicted RBP7.94□□□□□ -1.14
SPC29YPL124W VPS70P47161 811 aa7.94□□□□□ -1.14
SPC29YPL124W DPS1P04802 557 aaKnown RBP7.91□□□□□ -1.14
SPC29YPL124W RPP1BP10622 106 aaKnown RBP7.91□□□□□ -1.14
SPC29YPL124W PDR1P12383 1068 aa7.91□□□□□ -1.14
SPC29YPL124W KIC1P38692 1080 aa7.9□□□□□ -1.14
SPC29YPL124W COX6P00427 148 aa7.89□□□□□ -1.15
SPC29YPL124W MAK21Q12176 1025 aaKnown RBP7.89□□□□□ -1.15
SPC29YPL124W CSC1Q06538 782 aa7.86□□□□□ -1.15
SPC29YPL124W ORC6P38826 435 aa7.85□□□□□ -1.15
SPC29YPL124W TFB4Q12004 338 aa7.85□□□□□ -1.15
SPC29YPL124W YRR1Q12172 810 aa7.82□□□□□ -1.16
SPC29YPL124W CKB1P43639 278 aa7.81□□□□□ -1.16
SPC29YPL124W SAS4Q04003 481 aa7.8□□□□□ -1.16
SPC29YPL124W PEX21P50091 288 aa7.79□□□□□ -1.16
SPC29YPL124W BUD20Q08004 166 aaPredicted RBP7.79□□□□□ -1.16
SPC29YPL124W GYP1Q08484 637 aa7.79□□□□□ -1.16
SPC29YPL124W SAS10Q12136 610 aaPredicted RBP7.79□□□□□ -1.16
SPC29YPL124W SDH2P21801 266 aa7.78□□□□□ -1.16
SPC29YPL124W SRC1Q03707 834 aa7.78□□□□□ -1.16
SPC29YPL124W RAS1P01119 309 aa7.77□□□□□ -1.17
SPC29YPL124W DMA1P38823 416 aa7.77□□□□□ -1.17
SPC29YPL124W MVP1P40959 511 aaKnown RBP7.77□□□□□ -1.17
SPC29YPL124W STR2P47164 639 aa7.77□□□□□ -1.17
SPC29YPL124W TUM1Q08686 304 aaKnown RBP7.77□□□□□ -1.17
SPC29YPL124W PBS2P08018 668 aa7.75□□□□□ -1.17
SPC29YPL124W RGR1P19263 1082 aa7.75□□□□□ -1.17
SPC29YPL124W ISM1P48526 1002 aa7.75□□□□□ -1.17
SPC29YPL124W NUD1P32336 851 aa7.73□□□□□ -1.17
SPC29YPL124W PRT1P06103 763 aaKnown RBP7.72□□□□□ -1.17
SPC29YPL124W AMS1P22855 1083 aa7.72□□□□□ -1.17
SPC29YPL124W YPR109WQ06104 294 aa7.7□□□□□ -1.18
SPC29YPL124W TY1A-DR4O74302 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-HP0C2I4 478 aaKnown RBP7.67□□□□□ -1.18
SPC29YPL124W TY1A-AP0CX57 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-PR1P0CX58 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-ORP0CX59 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-PR2P0CX60 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-DR5P0CX65 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-ER2P0CX66 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-GR3P0CX67 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-LR1P0CX68 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-MR2P0CX69 440 aa7.67□□□□□ -1.18
SPC29YPL124W SEC2P17065 759 aa7.67□□□□□ -1.18
SPC29YPL124W DSF2P38213 736 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-JR2P47099 440 aa7.67□□□□□ -1.18
SPC29YPL124W TY1A-DR1Q03856 440 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms