RNA–Protein interactions for RNA: YPL079W

RPL21B, Transcript of Ribosomal 60S subunit protein L21B, yeast

Gene RPL21B, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL21B	YPL079W	RPA190	P10964	1664 aa	Known RBP	7.72	□□□□□ -1.17
RPL21B	YPL079W	SNT2	P53127	1403 aa		7.68	□□□□□ -1.18
RPL21B	YPL079W	TY3B-G	Q99315	1547 aa		7.68	□□□□□ -1.18
RPL21B	YPL079W	IFH1	P39520	1085 aa		7.67	□□□□□ -1.18
RPL21B	YPL079W	NTE1	Q04958	1679 aa		7.67	□□□□□ -1.18
RPL21B	YPL079W	GEA1	P47102	1408 aa	Predicted RBP	7.66	□□□□□ -1.18
RPL21B	YPL079W	RPO21	P04050	1733 aa	Known RBP	7.66	□□□□□ -1.18
RPL21B	YPL079W	NUP170	P38181	1502 aa		7.62	□□□□□ -1.19
RPL21B	YPL079W	TAF7	Q05021	590 aa		7.62	□□□□□ -1.19
RPL21B	YPL079W	YBT1	P32386	1661 aa		7.61	□□□□□ -1.19
RPL21B	YPL079W	IKI3	Q06706	1349 aa	Known RBP	7.6	□□□□□ -1.19
RPL21B	YPL079W	IRC20	Q06554	1556 aa		7.6	□□□□□ -1.19
RPL21B	YPL079W	YRF1-1	P0CX20	1796 aa		7.59	□□□□□ -1.19
RPL21B	YPL079W	YRF1-5	P0CX21	1796 aa		7.59	□□□□□ -1.19
RPL21B	YPL079W	YRF1-8	P0CX22	1796 aa		7.59	□□□□□ -1.19
RPL21B	YPL079W	SSM4	P40318	1319 aa		7.59	□□□□□ -1.19
RPL21B	YPL079W	NUP159	P40477	1460 aa		7.56	□□□□□ -1.2
RPL21B	YPL079W	GEA2	P39993	1459 aa	Known RBP	7.55	□□□□□ -1.2
RPL21B	YPL079W	VPS15	P22219	1454 aa		7.54	□□□□□ -1.2
RPL21B	YPL079W	SPO14	P36126	1683 aa		7.53	□□□□□ -1.2
RPL21B	YPL079W	GDB1	Q06625	1536 aa		7.52	□□□□□ -1.21
RPL21B	YPL079W	RTT106	P40161	455 aa		7.49	□□□□□ -1.21
RPL21B	YPL079W	ARO1	P08566	1588 aa	Known RBP	7.47	□□□□□ -1.21
RPL21B	YPL079W	PDR10	P51533	1564 aa		7.47	□□□□□ -1.21
RPL21B	YPL079W	BUD3	P25558	1636 aa		7.47	□□□□□ -1.21
RPL21B	YPL079W	PDR12	Q02785	1511 aa		7.47	□□□□□ -1.21
RPL21B	YPL079W	MET5	P47169	1442 aa		7.46	□□□□□ -1.21
RPL21B	YPL079W	CAT8	P39113	1433 aa		7.45	□□□□□ -1.22
RPL21B	YPL079W	NUP157	P40064	1391 aa	Known RBP	7.44	□□□□□ -1.22
RPL21B	YPL079W	MET10	P39692	1035 aa		7.41	□□□□□ -1.22
RPL21B	YPL079W	CKB1	P43639	278 aa		7.38	□□□□□ -1.23
RPL21B	YPL079W	SRB8	P25648	1427 aa		7.37	□□□□□ -1.23
RPL21B	YPL079W	YSP2	Q06681	1438 aa		7.37	□□□□□ -1.23
RPL21B	YPL079W	IQG1	Q12280	1495 aa		7.33	□□□□□ -1.24
RPL21B	YPL079W	GCN2	P15442	1659 aa		7.32	□□□□□ -1.24
RPL21B	YPL079W	SEC7	P11075	2009 aa	Known RBP	7.3	□□□□□ -1.24
RPL21B	YPL079W	DOP1	Q03921	1698 aa		7.28	□□□□□ -1.24
RPL21B	YPL079W	LTE1	P07866	1435 aa		7.27	□□□□□ -1.25
RPL21B	YPL079W	BNI1	P41832	1953 aa		7.26	□□□□□ -1.25
RPL21B	YPL079W	BUD21	Q08492	214 aa	Predicted RBP	7.26	□□□□□ -1.25
RPL21B	YPL079W	YOR093C	Q12275	1648 aa		7.26	□□□□□ -1.25
RPL21B	YPL079W	CHC1	P22137	1653 aa	Known RBP	7.25	□□□□□ -1.25
RPL21B	YPL079W	MMS1	Q06211	1407 aa		7.24	□□□□□ -1.25
RPL21B	YPL079W	BNR1	P40450	1375 aa		7.23	□□□□□ -1.25
RPL21B	YPL079W	VMR1	P38735	1592 aa		7.23	□□□□□ -1.25
RPL21B	YPL079W	PDR5	P33302	1511 aa	Known RBP	7.2	□□□□□ -1.26
RPL21B	YPL079W	PDR11	P40550	1411 aa		7.19	□□□□□ -1.26
RPL21B	YPL079W	ITT1	Q04638	464 aa		7.19	□□□□□ -1.26
RPL21B	YPL079W	DRS2	P39524	1355 aa		7.19	□□□□□ -1.26
RPL21B	YPL079W	TRM3	Q07527	1436 aa		7.17	□□□□□ -1.26
RPL21B	YPL079W	NUP188	P52593	1655 aa	Known RBP	7.16	□□□□□ -1.26
RPL21B	YPL079W	DNF2	Q12675	1612 aa		7.16	□□□□□ -1.26
RPL21B	YPL079W	IML1	P47170	1584 aa		7.12	□□□□□ -1.27
RPL21B	YPL079W	POL5	P39985	1022 aa	Known RBP	7.12	□□□□□ -1.27
RPL21B	YPL079W	NUP192	P47054	1683 aa		7.12	□□□□□ -1.27
RPL21B	YPL079W	NOP7	P53261	605 aa	Known RBP	7.11	□□□□□ -1.27
RPL21B	YPL079W	FAP1	P53971	965 aa		7.09	□□□□□ -1.27
RPL21B	YPL079W	ORC1	P54784	914 aa	Predicted RBP	7.09	□□□□□ -1.27
RPL21B	YPL079W	RAV1	P47104	1357 aa		7.08	□□□□□ -1.28
RPL21B	YPL079W	BFR2	Q06631	534 aa	Known RBP	7.08	□□□□□ -1.28
RPL21B	YPL079W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.07	□□□□□ -1.28	not detected
RPL21B	YPL079W	TYS1	P36421	394 aa	Known RBP	7.07	□□□□□ -1.28
RPL21B	YPL079W	PAF1	P38351	445 aa		7.06	□□□□□ -1.28
RPL21B	YPL079W	RTC1	Q08281	1341 aa		7.05	□□□□□ -1.28
RPL21B	YPL079W	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.04	□□□□□ -1.28
RPL21B	YPL079W	TAF5	P38129	798 aa		7.03	□□□□□ -1.28
RPL21B	YPL079W	SPT7	P35177	1332 aa		7.02	□□□□□ -1.28
RPL21B	YPL079W	IPL1	P38991	367 aa		7	□□□□□ -1.29
RPL21B	YPL079W	YLR419W	Q06698	1435 aa	Known RBP	6.98	□□□□□ -1.29
RPL21B	YPL079W	DNF3	Q12674	1656 aa		6.96	□□□□□ -1.29
RPL21B	YPL079W	MHP1	P43638	1398 aa		6.96	□□□□□ -1.29
RPL21B	YPL079W	LEU3	P08638	886 aa		6.96	□□□□□ -1.3
RPL21B	YPL079W	PSD2	P53037	1138 aa	Known RBP	6.96	□□□□□ -1.3
RPL21B	YPL079W	RAD9	P14737	1309 aa		6.96	□□□□□ -1.3
RPL21B	YPL079W	KIP3	P53086	805 aa	Known RBP	6.95	□□□□□ -1.3
RPL21B	YPL079W	NST1	P53935	1240 aa		6.95	□□□□□ -1.3
RPL21B	YPL079W	YAP3	P38749	330 aa		6.94	□□□□□ -1.3
RPL21B	YPL079W	BCK1	Q01389	1478 aa		6.93	□□□□□ -1.3
RPL21B	YPL079W	ESL2	P36168	1195 aa		6.93	□□□□□ -1.3
RPL21B	YPL079W	SEC3	P33332	1336 aa	Known RBP	6.91	□□□□□ -1.3
RPL21B	YPL079W	ENP1	P38333	483 aa	Known RBP	6.9	□□□□□ -1.3
RPL21B	YPL079W	ALD4	P46367	519 aa	Known RBP	6.9	□□□□□ -1.3
RPL21B	YPL079W	CAB1	Q04430	367 aa		6.9	□□□□□ -1.3
RPL21B	YPL079W	URN1	Q06525	465 aa	Known RBP	6.9	□□□□□ -1.3
RPL21B	YPL079W	SPE2	P21182	396 aa		6.89	□□□□□ -1.31
RPL21B	YPL079W	TAF8	Q03750	510 aa		6.89	□□□□□ -1.31
RPL21B	YPL079W	PDS5	Q04264	1277 aa		6.89	□□□□□ -1.31
RPL21B	YPL079W	MLP1	Q02455	1875 aa	Known RBP	6.89	□□□□□ -1.31
RPL21B	YPL079W	KRE5	P22023	1365 aa		6.88	□□□□□ -1.31
RPL21B	YPL079W	HAP1	P0CE41	1502 aa		6.87	□□□□□ -1.31
RPL21B	YPL079W	USO1	P25386	1790 aa		6.86	□□□□□ -1.31
RPL21B	YPL079W	RTG3	P38165	486 aa		6.84	□□□□□ -1.31
RPL21B	YPL079W	YML133C	Q03099	1374 aa		6.83	□□□□□ -1.32
RPL21B	YPL079W	YLL067C	Q07888	1374 aa		6.83	□□□□□ -1.32
RPL21B	YPL079W	YLL066C	Q99208	1374 aa		6.83	□□□□□ -1.32
RPL21B	YPL079W	ABP1	P15891	592 aa	Known RBP	6.82	□□□□□ -1.32
RPL21B	YPL079W	PRS1	P32895	427 aa	Known RBP	6.82	□□□□□ -1.32
RPL21B	YPL079W	RIA1	P53893	1110 aa		6.82	□□□□□ -1.32
RPL21B	YPL079W	CFT1	Q06632	1357 aa	Known RBP	6.82	□□□□□ -1.32
RPL21B	YPL079W	CHZ1	P40019	153 aa	Predicted RBP	6.81	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms