RNA–Protein interactions for RNA: YPL017C

IRC15, Transcript of Microtubule associated protein, yeastyeast

Gene IRC15, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC15YPL017C TY1B-GR1Q12141 1755 aa17.54■□□□□ 0.4
IRC15YPL017C TY1B-BLQ12490 1755 aa17.54■□□□□ 0.4
IRC15YPL017C ESC1Q03661 1658 aaKnown RBP17.53■□□□□ 0.4
IRC15YPL017C NUP170P38181 1502 aa17.53■□□□□ 0.4
IRC15YPL017C SNT2P53127 1403 aa17.48■□□□□ 0.39
IRC15YPL017C SSM4P40318 1319 aa17.46■□□□□ 0.39
IRC15YPL017C TY3B-GQ99315 1547 aa17.44■□□□□ 0.38
IRC15YPL017C DNF1P32660 1571 aa17.39■□□□□ 0.38
IRC15YPL017C RPA190P10964 1664 aaKnown RBP17.39■□□□□ 0.37
IRC15YPL017C NTE1Q04958 1679 aa17.35■□□□□ 0.37
IRC15YPL017C RPO21P04050 1733 aaKnown RBP17.32■□□□□ 0.36
IRC15YPL017C YBT1P32386 1661 aa17.3■□□□□ 0.36
IRC15YPL017C IRC20Q06554 1556 aa17.28■□□□□ 0.36
IRC15YPL017C GEA2P39993 1459 aaKnown RBP17.26■□□□□ 0.35
IRC15YPL017C RTT106P40161 455 aa17.23■□□□□ 0.35
IRC15YPL017C VPS15P22219 1454 aa17.23■□□□□ 0.35
IRC15YPL017C NUP159P40477 1460 aa17.16■□□□□ 0.34
IRC15YPL017C CAT8P39113 1433 aa17.15■□□□□ 0.34
IRC15YPL017C GDB1Q06625 1536 aa17.08■□□□□ 0.33
IRC15YPL017C YRF1-1P0CX20 1796 aa17.04■□□□□ 0.32
IRC15YPL017C YRF1-5P0CX21 1796 aa17.04■□□□□ 0.32
IRC15YPL017C YRF1-8P0CX22 1796 aa17.04■□□□□ 0.32
IRC15YPL017C ARO1P08566 1588 aaKnown RBP17.03■□□□□ 0.32
IRC15YPL017C SPO14P36126 1683 aa17.02■□□□□ 0.32
IRC15YPL017C PDR10P51533 1564 aa17.02■□□□□ 0.32
IRC15YPL017C PDR12Q02785 1511 aa17■□□□□ 0.31
IRC15YPL017C SRB8P25648 1427 aa16.97■□□□□ 0.31
IRC15YPL017C MET10P39692 1035 aa16.95■□□□□ 0.3
IRC15YPL017C NUP157P40064 1391 aaKnown RBP16.93■□□□□ 0.3
IRC15YPL017C CKB1P43639 278 aa16.93■□□□□ 0.3
IRC15YPL017C BUD3P25558 1636 aa16.9■□□□□ 0.3
IRC15YPL017C MET5P47169 1442 aa16.89■□□□□ 0.29
IRC15YPL017C GCN2P15442 1659 aa16.81■□□□□ 0.28
IRC15YPL017C YSP2Q06681 1438 aa16.79■□□□□ 0.28
IRC15YPL017C BUD21Q08492 214 aaPredicted RBP16.73■□□□□ 0.27
IRC15YPL017C POL5P39985 1022 aaKnown RBP16.7■□□□□ 0.26
IRC15YPL017C MMS1Q06211 1407 aa16.7■□□□□ 0.26
IRC15YPL017C IQG1Q12280 1495 aa16.69■□□□□ 0.26
IRC15YPL017C NSR1P27476 414 aaKnown RBP RIP-Chip data16.61■□□□□ 0.25not detected
IRC15YPL017C SEC7P11075 2009 aaKnown RBP16.57■□□□□ 0.24
IRC15YPL017C BNR1P40450 1375 aa16.56■□□□□ 0.24
IRC15YPL017C YOR093CQ12275 1648 aa16.56■□□□□ 0.24
IRC15YPL017C NOP7P53261 605 aaKnown RBP16.55■□□□□ 0.24
IRC15YPL017C PDR5P33302 1511 aaKnown RBP16.5■□□□□ 0.23
IRC15YPL017C CHC1P22137 1653 aaKnown RBP16.5■□□□□ 0.23
IRC15YPL017C LTE1P07866 1435 aa16.45■□□□□ 0.22
IRC15YPL017C PAF1P38351 445 aa16.42■□□□□ 0.22
IRC15YPL017C DOP1Q03921 1698 aa16.42■□□□□ 0.22
IRC15YPL017C BFR2Q06631 534 aaKnown RBP16.4■□□□□ 0.22
IRC15YPL017C SPT7P35177 1332 aa16.39■□□□□ 0.21
IRC15YPL017C VMR1P38735 1592 aa16.39■□□□□ 0.21
IRC15YPL017C PDR11P40550 1411 aa16.37■□□□□ 0.21
IRC15YPL017C TRM3Q07527 1436 aa16.35■□□□□ 0.21
IRC15YPL017C SEC3P33332 1336 aaKnown RBP16.33■□□□□ 0.2
IRC15YPL017C ENP1P38333 483 aaKnown RBP16.32■□□□□ 0.2
IRC15YPL017C ORC1P54784 914 aaPredicted RBP16.32■□□□□ 0.2
IRC15YPL017C DRS2P39524 1355 aa16.32■□□□□ 0.2
IRC15YPL017C RAV1P47104 1357 aa16.31■□□□□ 0.2
IRC15YPL017C NUP188P52593 1655 aaKnown RBP16.31■□□□□ 0.2
IRC15YPL017C IML1P47170 1584 aa16.26■□□□□ 0.19
IRC15YPL017C RTC1Q08281 1341 aa16.25■□□□□ 0.19
IRC15YPL017C TY3B-IQ7LHG5 1498 aaKnown RBP16.25■□□□□ 0.19
IRC15YPL017C MHP1P43638 1398 aa16.23■□□□□ 0.19
IRC15YPL017C DNF2Q12675 1612 aa16.19■□□□□ 0.18
IRC15YPL017C BNI1P41832 1953 aa16.19■□□□□ 0.18
IRC15YPL017C TAF5P38129 798 aa16.19■□□□□ 0.18
IRC15YPL017C NUP192P47054 1683 aa16.18■□□□□ 0.18
IRC15YPL017C ITT1Q04638 464 aa16.17■□□□□ 0.18
IRC15YPL017C LEU3P08638 886 aa16.14■□□□□ 0.17
IRC15YPL017C PSD2P53037 1138 aaKnown RBP16.14■□□□□ 0.17
IRC15YPL017C NOP2P40991 618 aaKnown RBP16.13■□□□□ 0.17
IRC15YPL017C YLR419WQ06698 1435 aaKnown RBP16.1■□□□□ 0.17
IRC15YPL017C ESL2P36168 1195 aa16.07■□□□□ 0.16
IRC15YPL017C TYS1P36421 394 aaKnown RBP16.07■□□□□ 0.16
IRC15YPL017C KIP3P53086 805 aaKnown RBP16.07■□□□□ 0.16
IRC15YPL017C PDS5Q04264 1277 aa16.02■□□□□ 0.15
IRC15YPL017C IPL1P38991 367 aa16.01■□□□□ 0.15
IRC15YPL017C PRS1P32895 427 aaKnown RBP15.97■□□□□ 0.15
IRC15YPL017C NST1P53935 1240 aa15.95■□□□□ 0.14
IRC15YPL017C URN1Q06525 465 aaKnown RBP15.94■□□□□ 0.14
IRC15YPL017C SPE2P21182 396 aa15.92■□□□□ 0.14
IRC15YPL017C RAD9P14737 1309 aa15.9■□□□□ 0.14
IRC15YPL017C YAP3P38749 330 aa15.89■□□□□ 0.13
IRC15YPL017C BCK1Q01389 1478 aa15.88■□□□□ 0.13
IRC15YPL017C ALD4P46367 519 aaKnown RBP15.86■□□□□ 0.13
IRC15YPL017C TAF8Q03750 510 aa15.85■□□□□ 0.13
IRC15YPL017C CAB1Q04430 367 aa15.8■□□□□ 0.12
IRC15YPL017C MLP1Q02455 1875 aaKnown RBP15.79■□□□□ 0.12
IRC15YPL017C RTG3P38165 486 aa15.78■□□□□ 0.12
IRC15YPL017C SCT1P32784 759 aa15.75■□□□□ 0.11
IRC15YPL017C ABP1P15891 592 aaKnown RBP15.74■□□□□ 0.11
IRC15YPL017C CHZ1P40019 153 aaPredicted RBP15.74■□□□□ 0.11
IRC15YPL017C HAP1P0CE41 1502 aa15.73■□□□□ 0.11
IRC15YPL017C DNF3Q12674 1656 aa15.71■□□□□ 0.11
IRC15YPL017C FKH1P40466 484 aa15.7■□□□□ 0.1
IRC15YPL017C KRE5P22023 1365 aa15.66■□□□□ 0.1
IRC15YPL017C NAP1P25293 417 aaKnown RBP15.65■□□□□ 0.1
IRC15YPL017C YML133CQ03099 1374 aa15.64■□□□□ 0.1
IRC15YPL017C YLL067CQ07888 1374 aa15.64■□□□□ 0.1
IRC15YPL017C YLL066CQ99208 1374 aa15.64■□□□□ 0.1
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms