RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C PRE3P38624 215 aa10.63□□□□□ -0.71
RPN8YOR261C HTA1P04911 132 aaKnown RBP10.62□□□□□ -0.71
RPN8YOR261C HTA2P04912 132 aa10.62□□□□□ -0.71
RPN8YOR261C PTC4P38089 393 aa10.6□□□□□ -0.71
RPN8YOR261C YEL023CP39992 682 aa10.6□□□□□ -0.71
RPN8YOR261C YDR344CQ05510 147 aa10.57□□□□□ -0.72
RPN8YOR261C VRP1P37370 817 aa10.45□□□□□ -0.74
RPN8YOR261C XDJ1P39102 459 aa10.43□□□□□ -0.74
RPN8YOR261C PML39Q03760 334 aa10.42□□□□□ -0.74
RPN8YOR261C GRE2Q12068 342 aaKnown RBP10.37□□□□□ -0.75
RPN8YOR261C ELP4Q02884 456 aaKnown RBP10.35□□□□□ -0.75
RPN8YOR261C EDS1P38073 919 aa10.29□□□□□ -0.76
RPN8YOR261C MID1P41821 548 aa10.29□□□□□ -0.76
RPN8YOR261C NST1P53935 1240 aa10.29□□□□□ -0.76
RPN8YOR261C MIF2P35201 549 aa10.27□□□□□ -0.77
RPN8YOR261C ARH1P48360 493 aa10.26□□□□□ -0.77
RPN8YOR261C DPS1P04802 557 aaKnown RBP10.25□□□□□ -0.77
RPN8YOR261C PTC3P34221 468 aaKnown RBP10.25□□□□□ -0.77
RPN8YOR261C ATH1P48016 1211 aa10.25□□□□□ -0.77
RPN8YOR261C GUT1P32190 709 aa10.24□□□□□ -0.77
RPN8YOR261C SOL3P38858 249 aa10.21□□□□□ -0.77
RPN8YOR261C MAK11P20484 414 aaKnown RBP10.2□□□□□ -0.78
RPN8YOR261C RAM2P29703 316 aa10.19□□□□□ -0.78
RPN8YOR261C SPT23P35210 1082 aa10.12□□□□□ -0.79
RPN8YOR261C ILV3P39522 585 aaKnown RBP10.12□□□□□ -0.79
RPN8YOR261C SRC1Q03707 834 aa10.12□□□□□ -0.79
RPN8YOR261C MPH3P0CE00 602 aa10.1□□□□□ -0.79
RPN8YOR261C PEX29Q03370 554 aa10.09□□□□□ -0.79
RPN8YOR261C AI4P03878 556 aa10.08□□□□□ -0.8
RPN8YOR261C COQ8P27697 501 aa10.08□□□□□ -0.8
RPN8YOR261C HAP5Q02516 242 aa10.06□□□□□ -0.8
RPN8YOR261C RQC2Q12532 1038 aaKnown RBP10.06□□□□□ -0.8
RPN8YOR261C DMA1P38823 416 aa10.04□□□□□ -0.8
RPN8YOR261C BNI4P53858 892 aa10□□□□□ -0.81
RPN8YOR261C RGA2Q06407 1009 aa10□□□□□ -0.81
RPN8YOR261C YML082WQ04533 649 aaKnown RBP9.99□□□□□ -0.81
RPN8YOR261C MPC54Q08550 464 aa9.98□□□□□ -0.81
RPN8YOR261C PTC2P39966 464 aaKnown RBP9.95□□□□□ -0.82
RPN8YOR261C YGR273CP53329 174 aa9.93□□□□□ -0.82
RPN8YOR261C NMA111P53920 997 aa9.89□□□□□ -0.83
RPN8YOR261C RAS1P01119 309 aa9.86□□□□□ -0.83
RPN8YOR261C SLI15P38283 698 aa9.86□□□□□ -0.83
RPN8YOR261C RGA1P39083 1007 aa9.86□□□□□ -0.83
RPN8YOR261C YPR015CQ12531 247 aa9.85□□□□□ -0.83
RPN8YOR261C DPL1Q05567 589 aa9.8□□□□□ -0.84
RPN8YOR261C NOP53Q12080 455 aaKnown RBP9.79□□□□□ -0.84
RPN8YOR261C RAM1P22007 431 aa9.78□□□□□ -0.84
RPN8YOR261C SET1P38827 1080 aaKnown RBP9.73□□□□□ -0.85
RPN8YOR261C KEX1P09620 729 aa9.67□□□□□ -0.86
RPN8YOR261C ISU2Q12056 156 aa9.67□□□□□ -0.86
RPN8YOR261C CDC73Q06697 393 aa9.66□□□□□ -0.86
RPN8YOR261C SDH2P21801 266 aa9.64□□□□□ -0.87
RPN8YOR261C AMS1P22855 1083 aa9.63□□□□□ -0.87
RPN8YOR261C SAS10Q12136 610 aaPredicted RBP9.63□□□□□ -0.87
RPN8YOR261C PDR1P12383 1068 aa9.61□□□□□ -0.87
RPN8YOR261C GYP1Q08484 637 aa9.61□□□□□ -0.87
RPN8YOR261C TRK1P12685 1235 aa9.59□□□□□ -0.87
RPN8YOR261C YPR148CQ06523 435 aa9.57□□□□□ -0.88
RPN8YOR261C IFH1P39520 1085 aa9.55□□□□□ -0.88
RPN8YOR261C YLR326WQ06170 240 aaKnown RBP9.55□□□□□ -0.88
RPN8YOR261C UBP14P38237 781 aaKnown RBP9.54□□□□□ -0.88
RPN8YOR261C PCS60P38137 543 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
RPN8YOR261C VHR2P40041 505 aa9.48□□□□□ -0.89
RPN8YOR261C VPS70P47161 811 aa9.48□□□□□ -0.89
RPN8YOR261C SAS4Q04003 481 aa9.48□□□□□ -0.89
RPN8YOR261C CKB1P43639 278 aa9.4□□□□□ -0.9
RPN8YOR261C YEL077CQ3E7X8 1277 aa9.4□□□□□ -0.9
RPN8YOR261C RAD54P32863 898 aa9.39□□□□□ -0.91
RPN8YOR261C BUD20Q08004 166 aaPredicted RBP9.39□□□□□ -0.91
RPN8YOR261C YPL062WQ02781 134 aa9.35□□□□□ -0.91
RPN8YOR261C REF2P42073 533 aaPredicted RBP9.34□□□□□ -0.91
RPN8YOR261C STR2P47164 639 aa9.32□□□□□ -0.92
RPN8YOR261C MRF1P30775 413 aaPredicted RBP9.31□□□□□ -0.92
RPN8YOR261C YDR090CQ03193 310 aa9.31□□□□□ -0.92
RPN8YOR261C YRR1Q12172 810 aa9.31□□□□□ -0.92
RPN8YOR261C PRT1P06103 763 aaKnown RBP9.3□□□□□ -0.92
RPN8YOR261C AIR1P40507 360 aaKnown RBP9.29□□□□□ -0.92
RPN8YOR261C ISM1P48526 1002 aa9.29□□□□□ -0.92
RPN8YOR261C CLA4P48562 842 aa9.28□□□□□ -0.92
RPN8YOR261C PBS2P08018 668 aa9.27□□□□□ -0.93
RPN8YOR261C RPP1BP10622 106 aaKnown RBP9.27□□□□□ -0.93
RPN8YOR261C CST6P40535 587 aa9.26□□□□□ -0.93
RPN8YOR261C GAP1P19145 602 aaPredicted RBP9.25□□□□□ -0.93
RPN8YOR261C SPB4P25808 606 aaPredicted RBP9.25□□□□□ -0.93
RPN8YOR261C COX6P00427 148 aa9.22□□□□□ -0.93
RPN8YOR261C DSF2P38213 736 aa9.22□□□□□ -0.93
RPN8YOR261C BRE2P43132 505 aa9.22□□□□□ -0.93
RPN8YOR261C MAK21Q12176 1025 aaKnown RBP9.21□□□□□ -0.94
RPN8YOR261C ERG12P07277 443 aa9.2□□□□□ -0.94
RPN8YOR261C NUD1P32336 851 aa9.2□□□□□ -0.94
RPN8YOR261C PEX21P50091 288 aa9.19□□□□□ -0.94
RPN8YOR261C TUM1Q08686 304 aaKnown RBP9.18□□□□□ -0.94
RPN8YOR261C TY1A-DR4O74302 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-HP0C2I4 478 aaKnown RBP9.17□□□□□ -0.94
RPN8YOR261C TY1A-AP0CX57 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-PR1P0CX58 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-ORP0CX59 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-PR2P0CX60 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-DR5P0CX65 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-ER2P0CX66 440 aa9.17□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms