RNA–Protein interactions for RNA: YOR228C

MCP1, Transcript of Mitochondrial protein of unknown function involved in lipid homeostasis, yeastyeast

Gene MCP1, Length 909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCP1YOR228C TY1B-MR1Q04214 1755 aa11.67□□□□□ -0.54
MCP1YOR228C TY1B-MR2Q04670 1755 aaKnown RBP11.67□□□□□ -0.54
MCP1YOR228C TY1B-LR1Q12088 1755 aaKnown RBP11.67□□□□□ -0.54
MCP1YOR228C TY1B-NL1Q12112 1755 aa11.67□□□□□ -0.54
MCP1YOR228C TY1B-GR1Q12141 1755 aa11.67□□□□□ -0.54
MCP1YOR228C TY1B-BLQ12490 1755 aa11.67□□□□□ -0.54
MCP1YOR228C VTH1P40438 1549 aa11.67□□□□□ -0.54
MCP1YOR228C VTH2P40890 1549 aa11.67□□□□□ -0.54
MCP1YOR228C NTE1Q04958 1679 aa11.62□□□□□ -0.55
MCP1YOR228C MYO4P32492 1471 aa11.61□□□□□ -0.55
MCP1YOR228C MET10P39692 1035 aa11.59□□□□□ -0.55
MCP1YOR228C RPO21P04050 1733 aaKnown RBP11.59□□□□□ -0.55
MCP1YOR228C SNT2P53127 1403 aa11.59□□□□□ -0.55
MCP1YOR228C IRC20Q06554 1556 aa11.53□□□□□ -0.56
MCP1YOR228C YTA7P40340 1379 aa11.53□□□□□ -0.56
MCP1YOR228C SNQ2P32568 1501 aaKnown RBP11.51□□□□□ -0.57
MCP1YOR228C STH1P32597 1359 aa11.51□□□□□ -0.57
MCP1YOR228C NUP170P38181 1502 aa11.5□□□□□ -0.57
MCP1YOR228C RTT106P40161 455 aa11.49□□□□□ -0.57
MCP1YOR228C DNF2Q12675 1612 aa11.49□□□□□ -0.57
MCP1YOR228C ULS1Q08562 1619 aa11.4□□□□□ -0.58
MCP1YOR228C SPO14P36126 1683 aa11.39□□□□□ -0.59
MCP1YOR228C PDR12Q02785 1511 aa11.38□□□□□ -0.59
MCP1YOR228C IQG1Q12280 1495 aa11.33□□□□□ -0.6
MCP1YOR228C NUP157P40064 1391 aaKnown RBP11.33□□□□□ -0.6
MCP1YOR228C TRM3Q07527 1436 aa11.31□□□□□ -0.6
MCP1YOR228C PDR10P51533 1564 aa11.3□□□□□ -0.6
MCP1YOR228C DOP1Q03921 1698 aa11.3□□□□□ -0.6
MCP1YOR228C GDB1Q06625 1536 aa11.28□□□□□ -0.6
MCP1YOR228C YOR093CQ12275 1648 aa11.24□□□□□ -0.61
MCP1YOR228C SAS10Q12136 610 aaPredicted RBP11.23□□□□□ -0.61
MCP1YOR228C MLP2P40457 1679 aa11.23□□□□□ -0.61
MCP1YOR228C BUD3P25558 1636 aa11.22□□□□□ -0.61
MCP1YOR228C TAF7Q05021 590 aa11.17□□□□□ -0.62
MCP1YOR228C PDR15Q04182 1529 aaKnown RBP11.16□□□□□ -0.62
MCP1YOR228C IFH1P39520 1085 aa11.15□□□□□ -0.62
MCP1YOR228C ARO1P08566 1588 aaKnown RBP11.13□□□□□ -0.63
MCP1YOR228C YAP3P38749 330 aa11.09□□□□□ -0.63
MCP1YOR228C CHC1P22137 1653 aaKnown RBP11.04□□□□□ -0.64
MCP1YOR228C CKB1P43639 278 aa11.03□□□□□ -0.64
MCP1YOR228C CAT8P39113 1433 aa11.02□□□□□ -0.64
MCP1YOR228C SEC7P11075 2009 aaKnown RBP11.01□□□□□ -0.65
MCP1YOR228C DNF3Q12674 1656 aa11.01□□□□□ -0.65
MCP1YOR228C MAK10Q02197 733 aa11□□□□□ -0.65
MCP1YOR228C BNR1P40450 1375 aa10.99□□□□□ -0.65
MCP1YOR228C YSP2Q06681 1438 aa10.99□□□□□ -0.65
MCP1YOR228C GEA1P47102 1408 aaPredicted RBP10.98□□□□□ -0.65
MCP1YOR228C URN1Q06525 465 aaKnown RBP10.95□□□□□ -0.66
MCP1YOR228C TY3B-GQ99315 1547 aa10.93□□□□□ -0.66
MCP1YOR228C YBT1P32386 1661 aa10.87□□□□□ -0.67
MCP1YOR228C IPL1P38991 367 aa10.8□□□□□ -0.68
MCP1YOR228C YMR196WQ04336 1088 aa10.77□□□□□ -0.69
MCP1YOR228C THI12P42883 340 aa10.75□□□□□ -0.69
MCP1YOR228C THI5P43534 340 aa10.75□□□□□ -0.69
MCP1YOR228C THI11P47183 340 aa10.75□□□□□ -0.69
MCP1YOR228C THI13Q07748 340 aa10.75□□□□□ -0.69
MCP1YOR228C SRB8P25648 1427 aa10.75□□□□□ -0.69
MCP1YOR228C USO1P25386 1790 aa10.73□□□□□ -0.69
MCP1YOR228C BUD21Q08492 214 aaPredicted RBP10.73□□□□□ -0.69
MCP1YOR228C TYS1P36421 394 aaKnown RBP10.72□□□□□ -0.69
MCP1YOR228C HAP1P0CE41 1502 aa10.65□□□□□ -0.7
MCP1YOR228C IML1P47170 1584 aa10.64□□□□□ -0.71
MCP1YOR228C VMR1P38735 1592 aa10.61□□□□□ -0.71
MCP1YOR228C TY1B-NL2Q99337 1749 aaKnown RBP10.61□□□□□ -0.71
MCP1YOR228C NUP188P52593 1655 aaKnown RBP10.6□□□□□ -0.71
MCP1YOR228C PDR5P33302 1511 aaKnown RBP10.54□□□□□ -0.72
MCP1YOR228C YAH1Q12184 172 aaKnown RBP10.54□□□□□ -0.72
MCP1YOR228C GLN1P32288 370 aaKnown RBP10.5□□□□□ -0.73
MCP1YOR228C APP1P53933 587 aa10.46□□□□□ -0.73
MCP1YOR228C PTP3P40048 928 aa10.43□□□□□ -0.74
MCP1YOR228C YIL055CP40523 627 aaKnown RBP10.43□□□□□ -0.74
MCP1YOR228C MRX12P47084 519 aa10.42□□□□□ -0.74
MCP1YOR228C RIA1P53893 1110 aa10.42□□□□□ -0.74
MCP1YOR228C KRE5P22023 1365 aa10.41□□□□□ -0.74
MCP1YOR228C PDR11P40550 1411 aa10.39□□□□□ -0.75
MCP1YOR228C CFT1Q06632 1357 aaKnown RBP10.39□□□□□ -0.75
MCP1YOR228C IKI3Q06706 1349 aaKnown RBP10.38□□□□□ -0.75
MCP1YOR228C YNR029CP53729 429 aaKnown RBP10.37□□□□□ -0.75
MCP1YOR228C SSM4P40318 1319 aa10.33□□□□□ -0.76
MCP1YOR228C REB1P21538 810 aa10.29□□□□□ -0.76
MCP1YOR228C ENT1Q12518 454 aa10.29□□□□□ -0.76
MCP1YOR228C PRI1P10363 409 aa10.28□□□□□ -0.76
MCP1YOR228C BCK1Q01389 1478 aa10.28□□□□□ -0.76
MCP1YOR228C CAB1Q04430 367 aa10.27□□□□□ -0.77
MCP1YOR228C YMR074CQ04773 145 aa10.27□□□□□ -0.77
MCP1YOR228C ENV9Q08651 330 aa10.24□□□□□ -0.77
MCP1YOR228C PAF1P38351 445 aa10.23□□□□□ -0.77
MCP1YOR228C ALD4P46367 519 aaKnown RBP10.23□□□□□ -0.77
MCP1YOR228C GCN2P15442 1659 aa10.22□□□□□ -0.77
MCP1YOR228C RAD9P14737 1309 aa10.22□□□□□ -0.77
MCP1YOR228C RAV1P47104 1357 aa10.21□□□□□ -0.78
MCP1YOR228C IMH1Q06704 911 aaKnown RBP10.18□□□□□ -0.78
MCP1YOR228C TY3B-IQ7LHG5 1498 aaKnown RBP10.17□□□□□ -0.78
MCP1YOR228C BFR2Q06631 534 aaKnown RBP10.16□□□□□ -0.78
MCP1YOR228C RTC1Q08281 1341 aa10.15□□□□□ -0.78
MCP1YOR228C NUP192P47054 1683 aa10.12□□□□□ -0.79
MCP1YOR228C BUD31P25337 157 aaPredicted RBP10.11□□□□□ -0.79
MCP1YOR228C PRP45P28004 379 aaPredicted RBP10.11□□□□□ -0.79
MCP1YOR228C TAF5P38129 798 aa10.09□□□□□ -0.79
MCP1YOR228C NAP1P25293 417 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms