RNA–Protein interactions for RNA: YOR207C

RET1, Transcript of Second-largest subunit of RNA polymerase III, yeastyeast

Gene RET1, Length 3,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET1YOR207C MDS3P53094 1487 aa7.15□□□□□ -1.26
RET1YOR207C CKB1P43639 278 aa7.14□□□□□ -1.27
RET1YOR207C YLR419WQ06698 1435 aaKnown RBP7.12□□□□□ -1.27
RET1YOR207C CLC1P17891 233 aa7.12□□□□□ -1.27
RET1YOR207C GDB1Q06625 1536 aa7.11□□□□□ -1.27
RET1YOR207C NOP7P53261 605 aaKnown RBP7.11□□□□□ -1.27
RET1YOR207C YBT1P32386 1661 aa7.11□□□□□ -1.27
RET1YOR207C NUP159P40477 1460 aa7.09□□□□□ -1.27
RET1YOR207C MHP1P43638 1398 aa7.08□□□□□ -1.28
RET1YOR207C PDS5Q04264 1277 aa7.07□□□□□ -1.28
RET1YOR207C ARO1P08566 1588 aaKnown RBP7.07□□□□□ -1.28
RET1YOR207C VTH1P40438 1549 aa7.07□□□□□ -1.28
RET1YOR207C VTH2P40890 1549 aa7.07□□□□□ -1.28
RET1YOR207C IQG1Q12280 1495 aa7.06□□□□□ -1.28
RET1YOR207C DJP1P40564 432 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-HO13535 1793 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-DR5P0C2I2 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-DR6P0C2I3 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-LR2P0C2I5 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-LR3P0C2I6 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C TY1B-PR1P0C2I9 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C TY1B-PR2P0C2J0 1756 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-PR3P0C2J1 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C TY1B-JR1P47098 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-ML2Q03434 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C TY1B-ER1Q03612 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-ML1Q04711 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C TY1B-GR2Q12269 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-OLQ12273 1755 aa7.06□□□□□ -1.28
RET1YOR207C TY1B-PLQ12414 1755 aaKnown RBP7.06□□□□□ -1.28
RET1YOR207C RVB2Q12464 471 aaKnown RBP7.04□□□□□ -1.28
RET1YOR207C BUD3P25558 1636 aa7.04□□□□□ -1.28
RET1YOR207C LEO1P38439 464 aa7.04□□□□□ -1.28
RET1YOR207C ESC1Q03661 1658 aaKnown RBP7.03□□□□□ -1.28
RET1YOR207C TAF5P38129 798 aa7.02□□□□□ -1.29
RET1YOR207C SNT2P53127 1403 aa7.02□□□□□ -1.29
RET1YOR207C EAF7P53911 425 aaKnown RBP7.02□□□□□ -1.29
RET1YOR207C TY1B-BRQ12193 1756 aa7.01□□□□□ -1.29
RET1YOR207C TY1B-GR3Q12316 1755 aa7.01□□□□□ -1.29
RET1YOR207C TY1B-ORQ92393 1755 aa7.01□□□□□ -1.29
RET1YOR207C GEA2P39993 1459 aaKnown RBP7.01□□□□□ -1.29
RET1YOR207C TFA1P36100 482 aa7.01□□□□□ -1.29
RET1YOR207C BUD21Q08492 214 aaPredicted RBP7.01□□□□□ -1.29
RET1YOR207C KIP3P53086 805 aaKnown RBP6.99□□□□□ -1.29
RET1YOR207C TY1B-JR2P47100 1755 aaKnown RBP6.98□□□□□ -1.29
RET1YOR207C TY1B-ER2Q03619 1755 aa6.98□□□□□ -1.29
RET1YOR207C TY1B-MR1Q04214 1755 aa6.98□□□□□ -1.29
RET1YOR207C TY1B-MR2Q04670 1755 aaKnown RBP6.98□□□□□ -1.29
RET1YOR207C TY1B-LR1Q12088 1755 aaKnown RBP6.98□□□□□ -1.29
RET1YOR207C TY1B-NL1Q12112 1755 aa6.98□□□□□ -1.29
RET1YOR207C TY1B-GR1Q12141 1755 aa6.98□□□□□ -1.29
RET1YOR207C TY1B-BLQ12490 1755 aa6.98□□□□□ -1.29
RET1YOR207C YRB30P53107 440 aaPredicted RBP6.97□□□□□ -1.29
RET1YOR207C GCN2P15442 1659 aa6.95□□□□□ -1.3
RET1YOR207C SNF7P39929 240 aaKnown RBP6.95□□□□□ -1.3
RET1YOR207C YDL144CQ07589 356 aa6.95□□□□□ -1.3
RET1YOR207C AVT3P36062 692 aa6.94□□□□□ -1.3
RET1YOR207C FPR3P38911 411 aaKnown RBP6.94□□□□□ -1.3
RET1YOR207C TRK1P12685 1235 aa6.93□□□□□ -1.3
RET1YOR207C SUI2P20459 304 aaKnown RBP6.93□□□□□ -1.3
RET1YOR207C IRC20Q06554 1556 aa6.93□□□□□ -1.3
RET1YOR207C RTG3P38165 486 aa6.93□□□□□ -1.3
RET1YOR207C ROX1P25042 368 aa6.92□□□□□ -1.3
RET1YOR207C SLN1P39928 1220 aaPredicted RBP6.92□□□□□ -1.3
RET1YOR207C PAF1P38351 445 aa6.92□□□□□ -1.3
RET1YOR207C MPP10P47083 593 aaKnown RBP6.92□□□□□ -1.3
RET1YOR207C VPS27P40343 622 aaKnown RBP6.91□□□□□ -1.3
RET1YOR207C TCB2P48231 1178 aa6.91□□□□□ -1.3
RET1YOR207C PCT1P13259 424 aa6.91□□□□□ -1.3
RET1YOR207C CDC45Q08032 650 aa6.91□□□□□ -1.3
RET1YOR207C CAT8P39113 1433 aa6.9□□□□□ -1.3
RET1YOR207C CDC25P04821 1589 aa6.9□□□□□ -1.3
RET1YOR207C MMS1Q06211 1407 aa6.89□□□□□ -1.31
RET1YOR207C SIS2P36024 562 aa6.89□□□□□ -1.31
RET1YOR207C LTE1P07866 1435 aa6.88□□□□□ -1.31
RET1YOR207C PDR11P40550 1411 aa6.88□□□□□ -1.31
RET1YOR207C DAL5P15365 543 aa6.88□□□□□ -1.31
RET1YOR207C MNN4P36044 1178 aa6.87□□□□□ -1.31
RET1YOR207C PDR12Q02785 1511 aa6.87□□□□□ -1.31
RET1YOR207C RLF2Q12495 606 aa6.87□□□□□ -1.31
RET1YOR207C CTR9P89105 1077 aa6.86□□□□□ -1.31
RET1YOR207C YEF3P16521 1044 aaKnown RBP6.86□□□□□ -1.31
RET1YOR207C AIM44Q99299 758 aa6.86□□□□□ -1.31
RET1YOR207C PDR5P33302 1511 aaKnown RBP6.86□□□□□ -1.31
RET1YOR207C TY3B-IQ7LHG5 1498 aaKnown RBP6.86□□□□□ -1.31
RET1YOR207C NUP157P40064 1391 aaKnown RBP6.86□□□□□ -1.31
RET1YOR207C SPO14P36126 1683 aa6.85□□□□□ -1.31
RET1YOR207C KNS1P32350 737 aaPredicted RBP6.85□□□□□ -1.31
RET1YOR207C YPP1P46951 817 aa6.85□□□□□ -1.31
RET1YOR207C YSP2Q06681 1438 aa6.85□□□□□ -1.31
RET1YOR207C DRS2P39524 1355 aa6.84□□□□□ -1.32
RET1YOR207C NTE1Q04958 1679 aa6.83□□□□□ -1.32
RET1YOR207C YIR014WP40570 242 aa6.82□□□□□ -1.32
RET1YOR207C YGL081WP53156 320 aa6.82□□□□□ -1.32
RET1YOR207C DOP1Q03921 1698 aa6.81□□□□□ -1.32
RET1YOR207C RRP46P53256 223 aaPredicted RBP6.81□□□□□ -1.32
RET1YOR207C SPE2P21182 396 aa6.81□□□□□ -1.32
RET1YOR207C RPO21P04050 1733 aaKnown RBP6.81□□□□□ -1.32
RET1YOR207C CSE4P36012 229 aa6.81□□□□□ -1.32
RET1YOR207C ABP1P15891 592 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms