RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W BFR2Q06631 534 aaKnown RBP12.76□□□□□ -0.37
SFL1YOR140W IFH1P39520 1085 aa12.72□□□□□ -0.37
SFL1YOR140W TRM732Q03496 1420 aa12.7□□□□□ -0.38
SFL1YOR140W TAF7Q05021 590 aa12.68□□□□□ -0.38
SFL1YOR140W SNT2P53127 1403 aa12.67□□□□□ -0.38
SFL1YOR140W NTE1Q04958 1679 aa12.64□□□□□ -0.39
SFL1YOR140W GEA1P47102 1408 aaPredicted RBP12.64□□□□□ -0.39
SFL1YOR140W RPO21P04050 1733 aaKnown RBP12.62□□□□□ -0.39
SFL1YOR140W TY3B-GQ99315 1547 aa12.58□□□□□ -0.4
SFL1YOR140W NUP159P40477 1460 aa12.55□□□□□ -0.4
SFL1YOR140W YRF1-1P0CX20 1796 aa12.55□□□□□ -0.4
SFL1YOR140W YRF1-5P0CX21 1796 aa12.55□□□□□ -0.4
SFL1YOR140W YRF1-8P0CX22 1796 aa12.55□□□□□ -0.4
SFL1YOR140W IKI3Q06706 1349 aaKnown RBP12.54□□□□□ -0.4
SFL1YOR140W RTT106P40161 455 aa12.53□□□□□ -0.4
SFL1YOR140W IRC20Q06554 1556 aa12.49□□□□□ -0.41
SFL1YOR140W GEA2P39993 1459 aaKnown RBP12.49□□□□□ -0.41
SFL1YOR140W YBT1P32386 1661 aa12.49□□□□□ -0.41
SFL1YOR140W SSM4P40318 1319 aa12.47□□□□□ -0.41
SFL1YOR140W VPS15P22219 1454 aa12.46□□□□□ -0.42
SFL1YOR140W NUP170P38181 1502 aa12.46□□□□□ -0.42
SFL1YOR140W MET5P47169 1442 aa12.45□□□□□ -0.42
SFL1YOR140W SPO14P36126 1683 aa12.43□□□□□ -0.42
SFL1YOR140W GDB1Q06625 1536 aa12.39□□□□□ -0.43
SFL1YOR140W MET10P39692 1035 aa12.38□□□□□ -0.43
SFL1YOR140W PDR10P51533 1564 aa12.35□□□□□ -0.43
SFL1YOR140W PDR12Q02785 1511 aa12.35□□□□□ -0.43
SFL1YOR140W CAT8P39113 1433 aa12.33□□□□□ -0.44
SFL1YOR140W NUP157P40064 1391 aaKnown RBP12.33□□□□□ -0.44
SFL1YOR140W BUD3P25558 1636 aa12.31□□□□□ -0.44
SFL1YOR140W ARO1P08566 1588 aaKnown RBP12.31□□□□□ -0.44
SFL1YOR140W CKB1P43639 278 aa12.29□□□□□ -0.44
SFL1YOR140W SRB8P25648 1427 aa12.2□□□□□ -0.46
SFL1YOR140W YSP2Q06681 1438 aa12.18□□□□□ -0.46
SFL1YOR140W IQG1Q12280 1495 aa12.15□□□□□ -0.46
SFL1YOR140W LTE1P07866 1435 aa12.14□□□□□ -0.47
SFL1YOR140W SEC7P11075 2009 aaKnown RBP12.11□□□□□ -0.47
SFL1YOR140W BUD21Q08492 214 aaPredicted RBP12.08□□□□□ -0.48
SFL1YOR140W BNI1P41832 1953 aa12.07□□□□□ -0.48
SFL1YOR140W ITT1Q04638 464 aa12.05□□□□□ -0.48
SFL1YOR140W BNR1P40450 1375 aa12.03□□□□□ -0.48
SFL1YOR140W DOP1Q03921 1698 aa12.02□□□□□ -0.48
SFL1YOR140W DRS2P39524 1355 aa12.02□□□□□ -0.49
SFL1YOR140W GCN2P15442 1659 aa12.01□□□□□ -0.49
SFL1YOR140W MMS1Q06211 1407 aa12□□□□□ -0.49
SFL1YOR140W CHC1P22137 1653 aaKnown RBP11.96□□□□□ -0.49
SFL1YOR140W TRM3Q07527 1436 aa11.9□□□□□ -0.5
SFL1YOR140W YOR093CQ12275 1648 aa11.9□□□□□ -0.5
SFL1YOR140W VMR1P38735 1592 aa11.88□□□□□ -0.51
SFL1YOR140W PDR11P40550 1411 aa11.85□□□□□ -0.51
SFL1YOR140W PDR5P33302 1511 aaKnown RBP11.83□□□□□ -0.52
SFL1YOR140W NOP7P53261 605 aaKnown RBP11.81□□□□□ -0.52
SFL1YOR140W NUP188P52593 1655 aaKnown RBP11.8□□□□□ -0.52
SFL1YOR140W DNF2Q12675 1612 aa11.8□□□□□ -0.52
SFL1YOR140W IML1P47170 1584 aa11.75□□□□□ -0.53
SFL1YOR140W TYS1P36421 394 aaKnown RBP11.75□□□□□ -0.53
SFL1YOR140W PAF1P38351 445 aa11.75□□□□□ -0.53
SFL1YOR140W POL5P39985 1022 aaKnown RBP11.72□□□□□ -0.53
SFL1YOR140W ORC1P54784 914 aaPredicted RBP11.72□□□□□ -0.53
SFL1YOR140W URN1Q06525 465 aaKnown RBP11.7□□□□□ -0.54
SFL1YOR140W RAV1P47104 1357 aa11.7□□□□□ -0.54
SFL1YOR140W IPL1P38991 367 aa11.68□□□□□ -0.54
SFL1YOR140W NUP192P47054 1683 aa11.67□□□□□ -0.54
SFL1YOR140W RTC1Q08281 1341 aa11.66□□□□□ -0.54
SFL1YOR140W TAF5P38129 798 aa11.63□□□□□ -0.55
SFL1YOR140W YAP3P38749 330 aa11.63□□□□□ -0.55
SFL1YOR140W TY3B-IQ7LHG5 1498 aaKnown RBP11.55□□□□□ -0.56
SFL1YOR140W DNF3Q12674 1656 aa11.54□□□□□ -0.56
SFL1YOR140W ABP1P15891 592 aaKnown RBP11.53□□□□□ -0.56
SFL1YOR140W KIP3P53086 805 aaKnown RBP11.53□□□□□ -0.56
SFL1YOR140W RAD9P14737 1309 aa11.52□□□□□ -0.56
SFL1YOR140W ESL2P36168 1195 aa11.51□□□□□ -0.57
SFL1YOR140W SPT7P35177 1332 aa11.51□□□□□ -0.57
SFL1YOR140W NSR1P27476 414 aaKnown RBP RIP-Chip data11.5□□□□□ -0.57not detected
SFL1YOR140W CAB1Q04430 367 aa11.48□□□□□ -0.57
SFL1YOR140W YLR419WQ06698 1435 aaKnown RBP11.47□□□□□ -0.57
SFL1YOR140W ALD4P46367 519 aaKnown RBP11.46□□□□□ -0.57
SFL1YOR140W TAF8Q03750 510 aa11.44□□□□□ -0.58
SFL1YOR140W BCK1Q01389 1478 aa11.44□□□□□ -0.58
SFL1YOR140W MHP1P43638 1398 aa11.44□□□□□ -0.58
SFL1YOR140W LEU3P08638 886 aa11.43□□□□□ -0.58
SFL1YOR140W SPE2P21182 396 aa11.43□□□□□ -0.58
SFL1YOR140W PSD2P53037 1138 aaKnown RBP11.43□□□□□ -0.58
SFL1YOR140W KRE5P22023 1365 aa11.43□□□□□ -0.58
SFL1YOR140W MAK10Q02197 733 aa11.4□□□□□ -0.58
SFL1YOR140W HAP1P0CE41 1502 aa11.39□□□□□ -0.59
SFL1YOR140W NST1P53935 1240 aa11.39□□□□□ -0.59
SFL1YOR140W PDS5Q04264 1277 aa11.38□□□□□ -0.59
SFL1YOR140W USO1P25386 1790 aa11.37□□□□□ -0.59
SFL1YOR140W SEC3P33332 1336 aaKnown RBP11.36□□□□□ -0.59
SFL1YOR140W EBP2P36049 427 aaKnown RBP11.35□□□□□ -0.59
SFL1YOR140W RIA1P53893 1110 aa11.35□□□□□ -0.59
SFL1YOR140W MRX12P47084 519 aa11.34□□□□□ -0.59
SFL1YOR140W CHZ1P40019 153 aaPredicted RBP11.33□□□□□ -0.6
SFL1YOR140W CAB3P36076 571 aa11.32□□□□□ -0.6
SFL1YOR140W MLP1Q02455 1875 aaKnown RBP11.31□□□□□ -0.6
SFL1YOR140W ENP1P38333 483 aaKnown RBP11.31□□□□□ -0.6
SFL1YOR140W RTG3P38165 486 aa11.3□□□□□ -0.6
SFL1YOR140W SIS2P36024 562 aa11.3□□□□□ -0.6
SFL1YOR140W CFT1Q06632 1357 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms