RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W YDL129WQ07555 291 aa9.95□□□□□ -0.82
BUD21YOR078W PTC4P38089 393 aa9.93□□□□□ -0.82
BUD21YOR078W RAM2P29703 316 aa9.86□□□□□ -0.83
BUD21YOR078W GRE2Q12068 342 aaKnown RBP9.86□□□□□ -0.83
BUD21YOR078W CHL1P22516 861 aaPredicted RBP9.85□□□□□ -0.83
BUD21YOR078W MAK11P20484 414 aaKnown RBP9.84□□□□□ -0.83
BUD21YOR078W PRE3P38624 215 aa9.84□□□□□ -0.83
BUD21YOR078W MIF2P35201 549 aa9.83□□□□□ -0.84
BUD21YOR078W EDS1P38073 919 aa9.83□□□□□ -0.84
BUD21YOR078W BCK2P33306 851 aa9.81□□□□□ -0.84
BUD21YOR078W PTC3P34221 468 aaKnown RBP9.79□□□□□ -0.84
BUD21YOR078W YDR344CQ05510 147 aa9.79□□□□□ -0.84
BUD21YOR078W ATH1P48016 1211 aa9.76□□□□□ -0.85
BUD21YOR078W PML39Q03760 334 aa9.76□□□□□ -0.85
BUD21YOR078W GUT1P32190 709 aa9.75□□□□□ -0.85
BUD21YOR078W NST1P53935 1240 aa9.73□□□□□ -0.85
BUD21YOR078W COQ8P27697 501 aa9.71□□□□□ -0.86
BUD21YOR078W SOL3P38858 249 aa9.68□□□□□ -0.86
BUD21YOR078W MID1P41821 548 aa9.65□□□□□ -0.86
BUD21YOR078W ELP4Q02884 456 aaKnown RBP9.65□□□□□ -0.86
BUD21YOR078W VRP1P37370 817 aa9.63□□□□□ -0.87
BUD21YOR078W ARH1P48360 493 aa9.6□□□□□ -0.87
BUD21YOR078W MPH3P0CE00 602 aa9.59□□□□□ -0.87
BUD21YOR078W ILV3P39522 585 aaKnown RBP9.59□□□□□ -0.87
BUD21YOR078W XDJ1P39102 459 aa9.58□□□□□ -0.88
BUD21YOR078W AI4P03878 556 aa9.57□□□□□ -0.88
BUD21YOR078W PEX29Q03370 554 aa9.51□□□□□ -0.89
BUD21YOR078W YGR273CP53329 174 aa9.5□□□□□ -0.89
BUD21YOR078W NOP53Q12080 455 aaKnown RBP9.5□□□□□ -0.89
BUD21YOR078W SPT23P35210 1082 aa9.48□□□□□ -0.89
BUD21YOR078W HAP5Q02516 242 aa9.45□□□□□ -0.9
BUD21YOR078W MPC54Q08550 464 aa9.43□□□□□ -0.9
BUD21YOR078W DPS1P04802 557 aaKnown RBP9.4□□□□□ -0.9
BUD21YOR078W BNI4P53858 892 aa9.4□□□□□ -0.9
BUD21YOR078W SLI15P38283 698 aa9.38□□□□□ -0.91
BUD21YOR078W YML082WQ04533 649 aaKnown RBP9.35□□□□□ -0.91
BUD21YOR078W PTC2P39966 464 aaKnown RBP9.34□□□□□ -0.91
BUD21YOR078W NMA111P53920 997 aa9.34□□□□□ -0.91
BUD21YOR078W DPL1Q05567 589 aa9.3□□□□□ -0.92
BUD21YOR078W KEX1P09620 729 aa9.29□□□□□ -0.92
BUD21YOR078W SET1P38827 1080 aaKnown RBP9.24□□□□□ -0.93
BUD21YOR078W YPR015CQ12531 247 aa9.24□□□□□ -0.93
BUD21YOR078W SRC1Q03707 834 aa9.23□□□□□ -0.93
BUD21YOR078W CDC73Q06697 393 aa9.21□□□□□ -0.94
BUD21YOR078W RAM1P22007 431 aa9.2□□□□□ -0.94
BUD21YOR078W YLR326WQ06170 240 aaKnown RBP9.2□□□□□ -0.94
BUD21YOR078W UBP14P38237 781 aaKnown RBP9.19□□□□□ -0.94
BUD21YOR078W ISU2Q12056 156 aa9.19□□□□□ -0.94
BUD21YOR078W VHR2P40041 505 aa9.16□□□□□ -0.94
BUD21YOR078W PCS60P38137 543 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
BUD21YOR078W RAS1P01119 309 aa9.12□□□□□ -0.95
BUD21YOR078W PDR1P12383 1068 aa9.1□□□□□ -0.95
BUD21YOR078W RAD54P32863 898 aa9.08□□□□□ -0.96
BUD21YOR078W GYP1Q08484 637 aa9.05□□□□□ -0.96
BUD21YOR078W YDR090CQ03193 310 aa9.02□□□□□ -0.97
BUD21YOR078W SDH2P21801 266 aa9.01□□□□□ -0.97
BUD21YOR078W AMS1P22855 1083 aa8.99□□□□□ -0.97
BUD21YOR078W RPP1BP10622 106 aaKnown RBP8.96□□□□□ -0.98
BUD21YOR078W SAS4Q04003 481 aa8.96□□□□□ -0.98
BUD21YOR078W IFH1P39520 1085 aa8.94□□□□□ -0.98
BUD21YOR078W GAP1P19145 602 aaPredicted RBP8.92□□□□□ -0.98
BUD21YOR078W YRR1Q12172 810 aa8.92□□□□□ -0.98
BUD21YOR078W KIC1P38692 1080 aa8.91□□□□□ -0.98
BUD21YOR078W BUD20Q08004 166 aaPredicted RBP8.91□□□□□ -0.98
BUD21YOR078W YPR148CQ06523 435 aa8.89□□□□□ -0.99
BUD21YOR078W TRK1P12685 1235 aa8.88□□□□□ -0.99
BUD21YOR078W STR2P47164 639 aa8.88□□□□□ -0.99
BUD21YOR078W REF2P42073 533 aaPredicted RBP8.87□□□□□ -0.99
BUD21YOR078W PEX21P50091 288 aa8.87□□□□□ -0.99
BUD21YOR078W ISM1P48526 1002 aa8.85□□□□□ -0.99
BUD21YOR078W CSC1Q06538 782 aa8.85□□□□□ -0.99
BUD21YOR078W TFB4Q12004 338 aa8.85□□□□□ -0.99
BUD21YOR078W PRT1P06103 763 aaKnown RBP8.84□□□□□ -0.99
BUD21YOR078W YEL077CQ3E7X8 1277 aa8.84□□□□□ -0.99
BUD21YOR078W ORC6P38826 435 aa8.83□□□□□ -1
BUD21YOR078W TUM1Q08686 304 aaKnown RBP8.83□□□□□ -1
BUD21YOR078W RGA1P39083 1007 aa8.82□□□□□ -1
BUD21YOR078W MRF1P30775 413 aaPredicted RBP8.81□□□□□ -1
BUD21YOR078W NUD1P32336 851 aa8.81□□□□□ -1
BUD21YOR078W RGA2Q06407 1009 aa8.8□□□□□ -1
BUD21YOR078W VPS70P47161 811 aa8.77□□□□□ -1.01
BUD21YOR078W TY1A-DR4O74302 440 aa8.74□□□□□ -1.01
BUD21YOR078W COX6P00427 148 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-HP0C2I4 478 aaKnown RBP8.74□□□□□ -1.01
BUD21YOR078W TY1A-AP0CX57 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-PR1P0CX58 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-ORP0CX59 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-PR2P0CX60 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-DR5P0CX65 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-ER2P0CX66 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-GR3P0CX67 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-LR1P0CX68 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-MR2P0CX69 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-JR2P47099 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-DR1Q03856 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-ML1Q04706 440 aaKnown RBP8.74□□□□□ -1.01
BUD21YOR078W TY1A-BRQ12217 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-NL2Q12470 440 aa8.74□□□□□ -1.01
BUD21YOR078W TY1A-GR2Q12485 440 aa8.74□□□□□ -1.01
BUD21YOR078W ERG12P07277 443 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms