RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W SSA1P10591 642 aaKnown RBP4.51□□□□□ -1.69
MSH2YOL090W SLX5P32828 619 aaKnown RBP4.51□□□□□ -1.69
MSH2YOL090W AIM7Q12156 149 aa4.51□□□□□ -1.69
MSH2YOL090W NST1P53935 1240 aa4.51□□□□□ -1.69
MSH2YOL090W SOL3P38858 249 aa4.51□□□□□ -1.69
MSH2YOL090W MRX12P47084 519 aa4.51□□□□□ -1.69
MSH2YOL090W URN1Q06525 465 aaKnown RBP4.5□□□□□ -1.69
MSH2YOL090W PTC3P34221 468 aaKnown RBP4.49□□□□□ -1.69
MSH2YOL090W SPA2P23201 1466 aaKnown RBP4.49□□□□□ -1.69
MSH2YOL090W YGL015CP33199 130 aa4.49□□□□□ -1.69
MSH2YOL090W UBP14P38237 781 aaKnown RBP4.49□□□□□ -1.69
MSH2YOL090W PIB1Q06651 286 aa4.47□□□□□ -1.69
MSH2YOL090W NSR1P27476 414 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
MSH2YOL090W HGH1P48362 394 aaKnown RBP4.47□□□□□ -1.69
MSH2YOL090W MIF2P35201 549 aa4.46□□□□□ -1.7
MSH2YOL090W TFB3Q03290 321 aa4.46□□□□□ -1.7
MSH2YOL090W YOR238WQ08634 303 aa4.46□□□□□ -1.7
MSH2YOL090W NOP53Q12080 455 aaKnown RBP4.46□□□□□ -1.7
MSH2YOL090W THO2P53552 1597 aaKnown RBP4.46□□□□□ -1.7
MSH2YOL090W PAM1P37304 830 aaKnown RBP4.45□□□□□ -1.7
MSH2YOL090W IES2P40154 320 aa4.44□□□□□ -1.7
MSH2YOL090W HPC2Q01448 625 aa4.44□□□□□ -1.7
MSH2YOL090W YLR326WQ06170 240 aaKnown RBP4.44□□□□□ -1.7
MSH2YOL090W VMA1P17255 1071 aaKnown RBP4.44□□□□□ -1.7
MSH2YOL090W PKC1P24583 1151 aa4.44□□□□□ -1.7
MSH2YOL090W COX6P00427 148 aa4.43□□□□□ -1.7
MSH2YOL090W NOP7P53261 605 aaKnown RBP4.43□□□□□ -1.7
MSH2YOL090W REF2P42073 533 aaPredicted RBP4.43□□□□□ -1.7
MSH2YOL090W GLN1P32288 370 aaKnown RBP4.42□□□□□ -1.7
MSH2YOL090W MST1P07236 462 aa4.42□□□□□ -1.7
MSH2YOL090W ILV3P39522 585 aaKnown RBP4.42□□□□□ -1.7
MSH2YOL090W TOP1P04786 769 aa4.4□□□□□ -1.7
MSH2YOL090W PCS60P38137 543 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71 RIP-Chip
MSH2YOL090W ATG36P46983 293 aa4.4□□□□□ -1.71
MSH2YOL090W SNU71P53207 620 aaKnown RBP4.39□□□□□ -1.71
MSH2YOL090W SEN54Q02825 467 aaPredicted RBP4.39□□□□□ -1.71
MSH2YOL090W RRN6P32786 894 aa4.39□□□□□ -1.71
MSH2YOL090W VHR2P40041 505 aa4.39□□□□□ -1.71
MSH2YOL090W SAM3Q08986 587 aa4.39□□□□□ -1.71
MSH2YOL090W BIM1P40013 344 aa4.39□□□□□ -1.71
MSH2YOL090W TGL3P40308 642 aa4.39□□□□□ -1.71
MSH2YOL090W ATG32P40458 529 aa4.39□□□□□ -1.71
MSH2YOL090W KTR1P27810 393 aaKnown RBP4.38□□□□□ -1.71
MSH2YOL090W MAK21Q12176 1025 aaKnown RBP4.38□□□□□ -1.71
MSH2YOL090W MET10P39692 1035 aa4.37□□□□□ -1.71
MSH2YOL090W YGR273CP53329 174 aa4.37□□□□□ -1.71
MSH2YOL090W SPC42P36094 363 aa4.36□□□□□ -1.71
MSH2YOL090W LAM6Q08001 693 aa4.36□□□□□ -1.71
MSH2YOL090W YTA7P40340 1379 aa4.36□□□□□ -1.71
MSH2YOL090W ERG12P07277 443 aa4.35□□□□□ -1.71
MSH2YOL090W NOB1Q08444 459 aaKnown RBP4.35□□□□□ -1.71
MSH2YOL090W KEX1P09620 729 aa4.35□□□□□ -1.71
MSH2YOL090W SSA4P22202 642 aaKnown RBP4.35□□□□□ -1.71
MSH2YOL090W BRL1P38770 471 aa4.35□□□□□ -1.71
MSH2YOL090W YAP5P40574 245 aa4.35□□□□□ -1.71
MSH2YOL090W GAP1P19145 602 aaPredicted RBP4.35□□□□□ -1.71
MSH2YOL090W SSF1P38789 453 aaPredicted RBP4.35□□□□□ -1.71
MSH2YOL090W ORC6P38826 435 aa4.35□□□□□ -1.71
MSH2YOL090W YJL007CP47080 104 aa4.35□□□□□ -1.71
MSH2YOL090W ATF2P53296 535 aa4.35□□□□□ -1.71
MSH2YOL090W FAR11P53917 953 aa4.35□□□□□ -1.71
MSH2YOL090W OCA5P38738 679 aa4.34□□□□□ -1.71
MSH2YOL090W CPS1P27614 576 aa4.34□□□□□ -1.72
MSH2YOL090W SLD2P34252 453 aa4.33□□□□□ -1.72
MSH2YOL090W TIF1P10081 395 aaKnown RBP4.32□□□□□ -1.72
MSH2YOL090W GUT1P32190 709 aa4.32□□□□□ -1.72
MSH2YOL090W BRN1P38170 754 aa4.32□□□□□ -1.72
MSH2YOL090W HSL1P34244 1518 aa4.32□□□□□ -1.72
MSH2YOL090W HEM3P28789 327 aa4.32□□□□□ -1.72
MSH2YOL090W DOS2P54858 310 aa4.32□□□□□ -1.72
MSH2YOL090W SWE1P32944 819 aa4.31□□□□□ -1.72
MSH2YOL090W CDC3P32457 520 aaKnown RBP4.3□□□□□ -1.72
MSH2YOL090W TTI1P36097 1038 aa4.3□□□□□ -1.72
MSH2YOL090W YML083CQ04526 418 aa4.3□□□□□ -1.72
MSH2YOL090W GRE2Q12068 342 aaKnown RBP4.3□□□□□ -1.72
MSH2YOL090W REV3P14284 1504 aa4.29□□□□□ -1.72
MSH2YOL090W RGR1P19263 1082 aa4.29□□□□□ -1.72
MSH2YOL090W NUG1P40010 520 aaKnown RBP4.28□□□□□ -1.72
MSH2YOL090W YOL036WQ08206 761 aa4.28□□□□□ -1.72
MSH2YOL090W PEP1P32319 1579 aa4.28□□□□□ -1.72
MSH2YOL090W CSN12P47130 423 aa4.28□□□□□ -1.72
MSH2YOL090W ALD2P47771 506 aa4.28□□□□□ -1.72
MSH2YOL090W RPL34AP87262 121 aaPredicted RBP4.28□□□□□ -1.72
MSH2YOL090W SSK2P53599 1579 aa4.28□□□□□ -1.72
MSH2YOL090W BIO2P32451 375 aa4.28□□□□□ -1.73
MSH2YOL090W TIF4632P39936 914 aaKnown RBP4.28□□□□□ -1.73
MSH2YOL090W YRB30P53107 440 aaPredicted RBP4.28□□□□□ -1.73
MSH2YOL090W HAT1Q12341 374 aa4.28□□□□□ -1.73
MSH2YOL090W SPT6P23615 1451 aaKnown RBP4.27□□□□□ -1.73
MSH2YOL090W SSA2P10592 639 aaKnown RBP4.27□□□□□ -1.73
MSH2YOL090W IPL1P38991 367 aa4.27□□□□□ -1.73
MSH2YOL090W ALD4P46367 519 aaKnown RBP4.27□□□□□ -1.73
MSH2YOL090W ATH1P48016 1211 aa4.27□□□□□ -1.73
MSH2YOL090W MDS3P53094 1487 aa4.27□□□□□ -1.73
MSH2YOL090W PSE1P32337 1089 aaKnown RBP4.27□□□□□ -1.73
MSH2YOL090W SLI15P38283 698 aa4.27□□□□□ -1.73
MSH2YOL090W TYW1Q08960 810 aaKnown RBP4.27□□□□□ -1.73
MSH2YOL090W PUP1P25043 261 aa4.26□□□□□ -1.73
MSH2YOL090W MVP1P40959 511 aaKnown RBP4.26□□□□□ -1.73
MSH2YOL090W GYP5Q12344 894 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms