RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W YDL129WQ07555 291 aa3.06□□□□□ -1.92
SEC21YNL287W YEL023CP39992 682 aa3.05□□□□□ -1.92
SEC21YNL287W EDS1P38073 919 aa3.05□□□□□ -1.92
SEC21YNL287W DCW1P36091 449 aa3.03□□□□□ -1.92
SEC21YNL287W CHL1P22516 861 aaPredicted RBP3.03□□□□□ -1.92
SEC21YNL287W PTC3P34221 468 aaKnown RBP3.02□□□□□ -1.93
SEC21YNL287W SAP30P38429 201 aa3.02□□□□□ -1.93
SEC21YNL287W PRE3P38624 215 aa3.02□□□□□ -1.93
SEC21YNL287W GRE2Q12068 342 aaKnown RBP3.02□□□□□ -1.93
SEC21YNL287W GUT1P32190 709 aa3.01□□□□□ -1.93
SEC21YNL287W SOL3P38858 249 aa3.01□□□□□ -1.93
SEC21YNL287W TFG1P41895 735 aaPredicted RBP3.01□□□□□ -1.93
SEC21YNL287W YDR344CQ05510 147 aa3.01□□□□□ -1.93
SEC21YNL287W NOP53Q12080 455 aaKnown RBP3.01□□□□□ -1.93
SEC21YNL287W BCK2P33306 851 aa3□□□□□ -1.93
SEC21YNL287W COQ8P27697 501 aa3□□□□□ -1.93
SEC21YNL287W AI4P03878 556 aa2.98□□□□□ -1.93
SEC21YNL287W MPH3P0CE00 602 aa2.98□□□□□ -1.93
SEC21YNL287W ILV3P39522 585 aaKnown RBP2.98□□□□□ -1.93
SEC21YNL287W MIF2P35201 549 aa2.97□□□□□ -1.93
SEC21YNL287W ATH1P48016 1211 aa2.97□□□□□ -1.93
SEC21YNL287W ARH1P48360 493 aa2.97□□□□□ -1.93
SEC21YNL287W PML39Q03760 334 aa2.97□□□□□ -1.93
SEC21YNL287W XDJ1P39102 459 aa2.96□□□□□ -1.94
SEC21YNL287W MID1P41821 548 aa2.94□□□□□ -1.94
SEC21YNL287W YGR273CP53329 174 aa2.94□□□□□ -1.94
SEC21YNL287W VRP1P37370 817 aa2.93□□□□□ -1.94
SEC21YNL287W SPT23P35210 1082 aa2.92□□□□□ -1.94
SEC21YNL287W BNI4P53858 892 aa2.92□□□□□ -1.94
SEC21YNL287W ELP4Q02884 456 aaKnown RBP2.92□□□□□ -1.94
SEC21YNL287W YML082WQ04533 649 aaKnown RBP2.92□□□□□ -1.94
SEC21YNL287W HAP5Q02516 242 aa2.91□□□□□ -1.94
SEC21YNL287W MPC54Q08550 464 aa2.91□□□□□ -1.94
SEC21YNL287W PEX29Q03370 554 aa2.9□□□□□ -1.94
SEC21YNL287W SLI15P38283 698 aa2.9□□□□□ -1.95
SEC21YNL287W RAM1P22007 431 aa2.88□□□□□ -1.95
SEC21YNL287W KEX1P09620 729 aa2.87□□□□□ -1.95
SEC21YNL287W SRC1Q03707 834 aa2.87□□□□□ -1.95
SEC21YNL287W UBP14P38237 781 aaKnown RBP2.87□□□□□ -1.95
SEC21YNL287W NMA111P53920 997 aa2.87□□□□□ -1.95
SEC21YNL287W DPL1Q05567 589 aa2.87□□□□□ -1.95
SEC21YNL287W YPR015CQ12531 247 aa2.87□□□□□ -1.95
SEC21YNL287W DPS1P04802 557 aaKnown RBP2.86□□□□□ -1.95
SEC21YNL287W YLR326WQ06170 240 aaKnown RBP2.86□□□□□ -1.95
SEC21YNL287W SET1P38827 1080 aaKnown RBP2.85□□□□□ -1.95
SEC21YNL287W PTC2P39966 464 aaKnown RBP2.85□□□□□ -1.95
SEC21YNL287W ISU2Q12056 156 aa2.84□□□□□ -1.95
SEC21YNL287W GAP1P19145 602 aaPredicted RBP2.83□□□□□ -1.96
SEC21YNL287W PCS60P38137 543 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96 RIP-Chip
SEC21YNL287W YPR148CQ06523 435 aa2.83□□□□□ -1.96
SEC21YNL287W YDR090CQ03193 310 aa2.83□□□□□ -1.96
SEC21YNL287W CDC73Q06697 393 aa2.83□□□□□ -1.96
SEC21YNL287W SDH2P21801 266 aa2.82□□□□□ -1.96
SEC21YNL287W VHR2P40041 505 aa2.8□□□□□ -1.96
SEC21YNL287W IFH1P39520 1085 aa2.79□□□□□ -1.96
SEC21YNL287W RAS1P01119 309 aa2.79□□□□□ -1.96
SEC21YNL287W PDR1P12383 1068 aa2.79□□□□□ -1.96
SEC21YNL287W RAD54P32863 898 aa2.79□□□□□ -1.96
SEC21YNL287W SAS4Q04003 481 aa2.78□□□□□ -1.96
SEC21YNL287W AMS1P22855 1083 aa2.78□□□□□ -1.97
SEC21YNL287W RGA2Q06407 1009 aa2.77□□□□□ -1.97
SEC21YNL287W ORC6P38826 435 aa2.76□□□□□ -1.97
SEC21YNL287W BUD20Q08004 166 aaPredicted RBP2.76□□□□□ -1.97
SEC21YNL287W TFB4Q12004 338 aa2.76□□□□□ -1.97
SEC21YNL287W REF2P42073 533 aaPredicted RBP2.75□□□□□ -1.97
SEC21YNL287W STR2P47164 639 aa2.75□□□□□ -1.97
SEC21YNL287W RPP1BP10622 106 aaKnown RBP2.75□□□□□ -1.97
SEC21YNL287W CSC1Q06538 782 aa2.75□□□□□ -1.97
SEC21YNL287W RGA1P39083 1007 aa2.74□□□□□ -1.97
SEC21YNL287W GYP1Q08484 637 aa2.74□□□□□ -1.97
SEC21YNL287W MAK21Q12176 1025 aaKnown RBP2.74□□□□□ -1.97
SEC21YNL287W COX6P00427 148 aa2.73□□□□□ -1.97
SEC21YNL287W ISM1P48526 1002 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-DR4O74302 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-HP0C2I4 478 aaKnown RBP2.73□□□□□ -1.97
SEC21YNL287W TY1A-AP0CX57 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-PR1P0CX58 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-ORP0CX59 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-PR2P0CX60 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-DR5P0CX65 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-ER2P0CX66 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-GR3P0CX67 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-LR1P0CX68 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-MR2P0CX69 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-JR2P47099 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-DR1Q03856 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-ML1Q04706 440 aaKnown RBP2.73□□□□□ -1.97
SEC21YNL287W YRR1Q12172 810 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-BRQ12217 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-NL2Q12470 440 aa2.73□□□□□ -1.97
SEC21YNL287W TY1A-GR2Q12485 440 aa2.73□□□□□ -1.97
SEC21YNL287W PRT1P06103 763 aaKnown RBP2.72□□□□□ -1.97
SEC21YNL287W TRK1P12685 1235 aa2.72□□□□□ -1.97
SEC21YNL287W SEC2P17065 759 aa2.72□□□□□ -1.97
SEC21YNL287W NUD1P32336 851 aa2.71□□□□□ -1.98
SEC21YNL287W MVP1P40959 511 aaKnown RBP2.71□□□□□ -1.98
SEC21YNL287W MRF1P30775 413 aaPredicted RBP2.71□□□□□ -1.98
SEC21YNL287W KIC1P38692 1080 aa2.71□□□□□ -1.98
SEC21YNL287W YEL077CQ3E7X8 1277 aa2.71□□□□□ -1.98
SEC21YNL287W RGR1P19263 1082 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms