RNA–Protein interactions for RNA: YNL178W

RPS3, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS3, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS3YNL178W TAF7Q05021 590 aa9.48□□□□□ -0.89
RPS3YNL178W MET5P47169 1442 aa9.46□□□□□ -0.9
RPS3YNL178W SNT2P53127 1403 aa9.45□□□□□ -0.9
RPS3YNL178W MLP2P40457 1679 aa9.44□□□□□ -0.9
RPS3YNL178W NTE1Q04958 1679 aa9.42□□□□□ -0.9
RPS3YNL178W NUP159P40477 1460 aa9.41□□□□□ -0.9
RPS3YNL178W RPO21P04050 1733 aaKnown RBP9.41□□□□□ -0.9
RPS3YNL178W ULS1Q08562 1619 aa9.41□□□□□ -0.9
RPS3YNL178W PDR15Q04182 1529 aaKnown RBP9.41□□□□□ -0.9
RPS3YNL178W RTT106P40161 455 aa9.35□□□□□ -0.91
RPS3YNL178W IFH1P39520 1085 aa9.34□□□□□ -0.91
RPS3YNL178W YRF1-1P0CX20 1796 aa9.34□□□□□ -0.91
RPS3YNL178W YRF1-5P0CX21 1796 aa9.34□□□□□ -0.91
RPS3YNL178W YRF1-8P0CX22 1796 aa9.34□□□□□ -0.91
RPS3YNL178W GEA2P39993 1459 aaKnown RBP9.34□□□□□ -0.91
RPS3YNL178W GEA1P47102 1408 aaPredicted RBP9.32□□□□□ -0.92
RPS3YNL178W MET10P39692 1035 aa9.29□□□□□ -0.92
RPS3YNL178W IRC20Q06554 1556 aa9.28□□□□□ -0.92
RPS3YNL178W VPS15P22219 1454 aa9.28□□□□□ -0.92
RPS3YNL178W LTE1P07866 1435 aa9.27□□□□□ -0.93
RPS3YNL178W PDR12Q02785 1511 aa9.26□□□□□ -0.93
RPS3YNL178W TY3B-GQ99315 1547 aa9.24□□□□□ -0.93
RPS3YNL178W SPO14P36126 1683 aa9.23□□□□□ -0.93
RPS3YNL178W CAT8P39113 1433 aa9.22□□□□□ -0.93
RPS3YNL178W IKI3Q06706 1349 aaKnown RBP9.21□□□□□ -0.94
RPS3YNL178W GDB1Q06625 1536 aa9.21□□□□□ -0.94
RPS3YNL178W NUP157P40064 1391 aaKnown RBP9.19□□□□□ -0.94
RPS3YNL178W YBT1P32386 1661 aa9.19□□□□□ -0.94
RPS3YNL178W PDR10P51533 1564 aa9.18□□□□□ -0.94
RPS3YNL178W NUP170P38181 1502 aa9.15□□□□□ -0.95
RPS3YNL178W IQG1Q12280 1495 aa9.12□□□□□ -0.95
RPS3YNL178W DRS2P39524 1355 aa9.12□□□□□ -0.95
RPS3YNL178W ARO1P08566 1588 aaKnown RBP9.11□□□□□ -0.95
RPS3YNL178W BNI1P41832 1953 aa9.1□□□□□ -0.95
RPS3YNL178W BUD3P25558 1636 aa9.09□□□□□ -0.95
RPS3YNL178W CKB1P43639 278 aa9.09□□□□□ -0.95
RPS3YNL178W ITT1Q04638 464 aa9.09□□□□□ -0.95
RPS3YNL178W SSM4P40318 1319 aa9.07□□□□□ -0.96
RPS3YNL178W SRB8P25648 1427 aa9.06□□□□□ -0.96
RPS3YNL178W YSP2Q06681 1438 aa9.05□□□□□ -0.96
RPS3YNL178W FAP1P53971 965 aa9.04□□□□□ -0.96
RPS3YNL178W SEC7P11075 2009 aaKnown RBP9.04□□□□□ -0.96
RPS3YNL178W TRM3Q07527 1436 aa9.03□□□□□ -0.96
RPS3YNL178W DOP1Q03921 1698 aa9□□□□□ -0.97
RPS3YNL178W BNR1P40450 1375 aa8.99□□□□□ -0.97
RPS3YNL178W MMS1Q06211 1407 aa8.98□□□□□ -0.97
RPS3YNL178W BUD21Q08492 214 aaPredicted RBP8.96□□□□□ -0.98
RPS3YNL178W CHC1P22137 1653 aaKnown RBP8.94□□□□□ -0.98
RPS3YNL178W DNF2Q12675 1612 aa8.87□□□□□ -0.99
RPS3YNL178W GCN2P15442 1659 aa8.86□□□□□ -0.99
RPS3YNL178W AVT3P36062 692 aa8.79□□□□□ -1
RPS3YNL178W YOR093CQ12275 1648 aa8.79□□□□□ -1
RPS3YNL178W ABP1P15891 592 aaKnown RBP8.78□□□□□ -1
RPS3YNL178W URN1Q06525 465 aaKnown RBP8.78□□□□□ -1
RPS3YNL178W NUP188P52593 1655 aaKnown RBP8.78□□□□□ -1
RPS3YNL178W PDR5P33302 1511 aaKnown RBP8.77□□□□□ -1.01
RPS3YNL178W YAP3P38749 330 aa8.76□□□□□ -1.01
RPS3YNL178W VMR1P38735 1592 aa8.76□□□□□ -1.01
RPS3YNL178W PAF1P38351 445 aa8.73□□□□□ -1.01
RPS3YNL178W IPL1P38991 367 aa8.73□□□□□ -1.01
RPS3YNL178W IML1P47170 1584 aa8.72□□□□□ -1.01
RPS3YNL178W NOP7P53261 605 aaKnown RBP8.71□□□□□ -1.02
RPS3YNL178W DIP2Q12220 943 aaPredicted RBP8.71□□□□□ -1.02
RPS3YNL178W PDR11P40550 1411 aa8.71□□□□□ -1.02
RPS3YNL178W TYS1P36421 394 aaKnown RBP8.69□□□□□ -1.02
RPS3YNL178W RAV1P47104 1357 aa8.68□□□□□ -1.02
RPS3YNL178W DNF3Q12674 1656 aa8.67□□□□□ -1.02
RPS3YNL178W HAP1P0CE41 1502 aa8.64□□□□□ -1.03
RPS3YNL178W RTC1Q08281 1341 aa8.64□□□□□ -1.03
RPS3YNL178W MIF2P35201 549 aa8.6□□□□□ -1.03
RPS3YNL178W MAK10Q02197 733 aa8.6□□□□□ -1.03
RPS3YNL178W NUP192P47054 1683 aa8.56□□□□□ -1.04
RPS3YNL178W ESL2P36168 1195 aa8.53□□□□□ -1.04
RPS3YNL178W TAF5P38129 798 aa8.53□□□□□ -1.04
RPS3YNL178W POL5P39985 1022 aaKnown RBP8.52□□□□□ -1.05
RPS3YNL178W ALD4P46367 519 aaKnown RBP8.51□□□□□ -1.05
RPS3YNL178W BCK1Q01389 1478 aa8.51□□□□□ -1.05
RPS3YNL178W RAD9P14737 1309 aa8.5□□□□□ -1.05
RPS3YNL178W TY3B-IQ7LHG5 1498 aaKnown RBP8.49□□□□□ -1.05
RPS3YNL178W PRY3P47033 881 aa8.48□□□□□ -1.05
RPS3YNL178W MRX12P47084 519 aa8.47□□□□□ -1.05
RPS3YNL178W CAB1Q04430 367 aa8.47□□□□□ -1.05
RPS3YNL178W KRE5P22023 1365 aa8.47□□□□□ -1.05
RPS3YNL178W CFT1Q06632 1357 aaKnown RBP8.46□□□□□ -1.06
RPS3YNL178W USO1P25386 1790 aa8.45□□□□□ -1.06
RPS3YNL178W KIP3P53086 805 aaKnown RBP8.45□□□□□ -1.06
RPS3YNL178W ORC1P54784 914 aaPredicted RBP8.45□□□□□ -1.06
RPS3YNL178W TY1B-NL2Q99337 1749 aaKnown RBP8.45□□□□□ -1.06
RPS3YNL178W RIA1P53893 1110 aa8.44□□□□□ -1.06
RPS3YNL178W TAF8Q03750 510 aa8.44□□□□□ -1.06
RPS3YNL178W NAP1P25293 417 aaKnown RBP8.43□□□□□ -1.06
RPS3YNL178W YLR419WQ06698 1435 aaKnown RBP8.41□□□□□ -1.06
RPS3YNL178W SPE2P21182 396 aa8.41□□□□□ -1.06
RPS3YNL178W YMR196WQ04336 1088 aa8.41□□□□□ -1.06
RPS3YNL178W SCT1P32784 759 aa8.39□□□□□ -1.07
RPS3YNL178W YNR029CP53729 429 aaKnown RBP8.38□□□□□ -1.07
RPS3YNL178W MHP1P43638 1398 aa8.37□□□□□ -1.07
RPS3YNL178W DMA1P38823 416 aa8.36□□□□□ -1.07
RPS3YNL178W THI12P42883 340 aa8.35□□□□□ -1.07
RPS3YNL178W THI5P43534 340 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms