RNA–Protein interactions for RNA: YNL053W

MSG5, Transcript of Dual-specificity protein phosphatase, yeastyeast

Gene MSG5, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSG5YNL053W TY1B-GR2Q12269 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-OLQ12273 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-GR3Q12316 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TY1B-PLQ12414 1755 aaKnown RBP10.11□□□□□ -0.79
MSG5YNL053W TY1B-ORQ92393 1755 aa10.11□□□□□ -0.79
MSG5YNL053W TRM732Q03496 1420 aa10.1□□□□□ -0.79
MSG5YNL053W CDC25P04821 1589 aa10.09□□□□□ -0.79
MSG5YNL053W PDR15Q04182 1529 aaKnown RBP10.09□□□□□ -0.79
MSG5YNL053W TAF7Q05021 590 aa10.08□□□□□ -0.8
MSG5YNL053W SPT21P35209 758 aa10.07□□□□□ -0.8
MSG5YNL053W VTH1P40438 1549 aa10.05□□□□□ -0.8
MSG5YNL053W VTH2P40890 1549 aa10.05□□□□□ -0.8
MSG5YNL053W ULS1Q08562 1619 aa10.04□□□□□ -0.8
MSG5YNL053W HOP09932 586 aa10.04□□□□□ -0.8
MSG5YNL053W DCD1P06773 312 aa10.03□□□□□ -0.8
MSG5YNL053W IFH1P39520 1085 aa10.02□□□□□ -0.81
MSG5YNL053W TSC11P40061 1430 aa10.02□□□□□ -0.81
MSG5YNL053W PAN1P32521 1480 aa10.01□□□□□ -0.81
MSG5YNL053W TFC8Q12308 588 aa10□□□□□ -0.81
MSG5YNL053W ESC1Q03661 1658 aaKnown RBP9.99□□□□□ -0.81
MSG5YNL053W IKI3Q06706 1349 aaKnown RBP9.99□□□□□ -0.81
MSG5YNL053W GEA1P47102 1408 aaPredicted RBP9.98□□□□□ -0.81
MSG5YNL053W SIS1P25294 352 aaKnown RBP9.98□□□□□ -0.81
MSG5YNL053W TY1B-JR2P47100 1755 aaKnown RBP9.94□□□□□ -0.82
MSG5YNL053W TY1B-ER2Q03619 1755 aa9.94□□□□□ -0.82
MSG5YNL053W TY1B-MR1Q04214 1755 aa9.94□□□□□ -0.82
MSG5YNL053W TY1B-MR2Q04670 1755 aaKnown RBP9.94□□□□□ -0.82
MSG5YNL053W TY1B-LR1Q12088 1755 aaKnown RBP9.94□□□□□ -0.82
MSG5YNL053W TY1B-NL1Q12112 1755 aa9.94□□□□□ -0.82
MSG5YNL053W TY1B-GR1Q12141 1755 aa9.94□□□□□ -0.82
MSG5YNL053W TY1B-BLQ12490 1755 aa9.94□□□□□ -0.82
MSG5YNL053W NUP170P38181 1502 aa9.92□□□□□ -0.82
MSG5YNL053W NTE1Q04958 1679 aa9.92□□□□□ -0.82
MSG5YNL053W SNT2P53127 1403 aa9.91□□□□□ -0.82
MSG5YNL053W SCY1P53009 804 aa9.9□□□□□ -0.83
MSG5YNL053W RPA190P10964 1664 aaKnown RBP9.9□□□□□ -0.83
MSG5YNL053W DNF1P32660 1571 aa9.89□□□□□ -0.83
MSG5YNL053W TY3B-GQ99315 1547 aa9.89□□□□□ -0.83
MSG5YNL053W TIF4632P39936 914 aaKnown RBP9.89□□□□□ -0.83
MSG5YNL053W SSM4P40318 1319 aa9.88□□□□□ -0.83
MSG5YNL053W UBP9P39967 754 aa9.87□□□□□ -0.83
MSG5YNL053W RPO21P04050 1733 aaKnown RBP9.86□□□□□ -0.83
MSG5YNL053W TGL3P40308 642 aa9.86□□□□□ -0.83
MSG5YNL053W GEA2P39993 1459 aaKnown RBP9.84□□□□□ -0.83
MSG5YNL053W YBT1P32386 1661 aa9.84□□□□□ -0.83
MSG5YNL053W RTT106P40161 455 aa9.83□□□□□ -0.84
MSG5YNL053W IRC20Q06554 1556 aa9.82□□□□□ -0.84
MSG5YNL053W SLX5P32828 619 aaKnown RBP9.82□□□□□ -0.84
MSG5YNL053W NUP159P40477 1460 aa9.79□□□□□ -0.84
MSG5YNL053W VPS15P22219 1454 aa9.78□□□□□ -0.84
MSG5YNL053W CAT8P39113 1433 aa9.75□□□□□ -0.85
MSG5YNL053W GDB1Q06625 1536 aa9.71□□□□□ -0.86
MSG5YNL053W ARO1P08566 1588 aaKnown RBP9.7□□□□□ -0.86
MSG5YNL053W SPO14P36126 1683 aa9.69□□□□□ -0.86
MSG5YNL053W PDR10P51533 1564 aa9.68□□□□□ -0.86
MSG5YNL053W YRF1-1P0CX20 1796 aa9.67□□□□□ -0.86
MSG5YNL053W YRF1-5P0CX21 1796 aa9.67□□□□□ -0.86
MSG5YNL053W YRF1-8P0CX22 1796 aa9.67□□□□□ -0.86
MSG5YNL053W PDR12Q02785 1511 aa9.66□□□□□ -0.86
MSG5YNL053W BCH2P36122 765 aa9.66□□□□□ -0.86
MSG5YNL053W SRB8P25648 1427 aa9.65□□□□□ -0.86
MSG5YNL053W NUP157P40064 1391 aaKnown RBP9.65□□□□□ -0.86
MSG5YNL053W CKB1P43639 278 aa9.64□□□□□ -0.87
MSG5YNL053W MET5P47169 1442 aa9.63□□□□□ -0.87
MSG5YNL053W MET10P39692 1035 aa9.62□□□□□ -0.87
MSG5YNL053W BUD3P25558 1636 aa9.61□□□□□ -0.87
MSG5YNL053W GCN2P15442 1659 aa9.56□□□□□ -0.88
MSG5YNL053W IQG1Q12280 1495 aa9.52□□□□□ -0.89
MSG5YNL053W RIM101P33400 625 aa9.52□□□□□ -0.89
MSG5YNL053W BUD21Q08492 214 aaPredicted RBP9.52□□□□□ -0.89
MSG5YNL053W YSP2Q06681 1438 aa9.51□□□□□ -0.89
MSG5YNL053W MMS1Q06211 1407 aa9.51□□□□□ -0.89
MSG5YNL053W POL5P39985 1022 aaKnown RBP9.48□□□□□ -0.89
MSG5YNL053W YOR093CQ12275 1648 aa9.44□□□□□ -0.9
MSG5YNL053W NOP7P53261 605 aaKnown RBP9.44□□□□□ -0.9
MSG5YNL053W BNR1P40450 1375 aa9.43□□□□□ -0.9
MSG5YNL053W LTE1P07866 1435 aa9.4□□□□□ -0.9
MSG5YNL053W CHC1P22137 1653 aaKnown RBP9.4□□□□□ -0.91
MSG5YNL053W DOP1Q03921 1698 aa9.39□□□□□ -0.91
MSG5YNL053W DMA1P38823 416 aa9.39□□□□□ -0.91
MSG5YNL053W PTP3P40048 928 aa9.38□□□□□ -0.91
MSG5YNL053W PDR5P33302 1511 aaKnown RBP9.37□□□□□ -0.91
MSG5YNL053W PAF1P38351 445 aa9.37□□□□□ -0.91
MSG5YNL053W TRM3Q07527 1436 aa9.36□□□□□ -0.91
MSG5YNL053W YBL029C-AQ3E756 94 aa9.35□□□□□ -0.91
MSG5YNL053W DRS2P39524 1355 aa9.35□□□□□ -0.91
MSG5YNL053W NSR1P27476 414 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
MSG5YNL053W VMR1P38735 1592 aa9.33□□□□□ -0.92
MSG5YNL053W EPS1P40557 701 aa9.33□□□□□ -0.92
MSG5YNL053W MST1P07236 462 aa9.32□□□□□ -0.92
MSG5YNL053W BDF1P35817 686 aa9.32□□□□□ -0.92
MSG5YNL053W SEC7P11075 2009 aaKnown RBP9.32□□□□□ -0.92
MSG5YNL053W IML1P47170 1584 aa9.29□□□□□ -0.92
MSG5YNL053W NUP188P52593 1655 aaKnown RBP9.28□□□□□ -0.92
MSG5YNL053W ORC1P54784 914 aaPredicted RBP9.28□□□□□ -0.92
MSG5YNL053W SEC3P33332 1336 aaKnown RBP9.27□□□□□ -0.92
MSG5YNL053W SPT7P35177 1332 aa9.27□□□□□ -0.92
MSG5YNL053W PDR11P40550 1411 aa9.27□□□□□ -0.93
MSG5YNL053W RAV1P47104 1357 aa9.26□□□□□ -0.93
MSG5YNL053W YOR238WQ08634 303 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms